4-26921196-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921196
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921196
    reference: chr 4
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.63A>G
  hgvsp: ENST00000478049.1:c.63A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.222A>G
  hgvsp: ENST00000467011.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.483A>G
  hgvsp: ENST00000412829.2:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.222A>G
  hgvsp: ENST00000467087.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.63A>G
  hgvsp: ENST00000463501.1:c.63A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.63A>G
  hgvsp: ENST00000494628.2:c.63A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.222A>G
  hgvsp: ENST00000465503.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.483A>G
  hgvsp: ENST00000237364.5:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.483A>G
  hgvsp: ENST00000382009.3:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10124
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr74Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

4-26921202-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921202
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921202
    reference: chr 4
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.228T>A
  hgvsp: ENSP00000417569.1:p.His76Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.69T>A
  hgvsp: ENSP00000473581.1:p.His23Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.69T>A
  hgvsp: ENSP00000473527.1:p.His23Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.69T>A
  hgvsp: ENSP00000473283.1:p.His23Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.489T>A
  hgvsp: ENSP00000237364.5:p.His163Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.489T>A
  hgvsp: ENSP00000371439.3:p.His163Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.228T>A
  hgvsp: ENSP00000419073.1:p.His76Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.489T>A
  hgvsp: ENSP00000404812.2:p.His163Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.228T>A
  hgvsp: ENSP00000419383.1:p.His76Gln
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6724
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His76Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

4-26921205-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921205
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921205
    reference: chr 4
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.492A>G
  hgvsp: ENST00000382009.3:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.231A>G
  hgvsp: ENST00000467011.1:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.231A>G
  hgvsp: ENST00000467087.1:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.72A>G
  hgvsp: ENST00000494628.2:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.72A>G
  hgvsp: ENST00000463501.1:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.492A>G
  hgvsp: ENST00000412829.2:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.492A>G
  hgvsp: ENST00000237364.5:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.231A>G
  hgvsp: ENST00000465503.1:c.231A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.72A>G
  hgvsp: ENST00000478049.1:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31226
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3670
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys77Lys
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ

4-26921260-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921260
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921260
    reference: chr 4
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.543+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.543+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.123+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.282+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.282+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.282+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.123+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.123+4G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.543+4G>A
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6723
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10036
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: c.282+4G>A
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

4-26921276-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921276
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921276
    reference: chr 4
allele count: 2
allele frequency: 1.650982334489021e-5
allele num: 121140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.282+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.282+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.543+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.282+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.123+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.123+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.543+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.123+20C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.543+20C>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

4-26921281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921281
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921281
    reference: chr 4
allele count: 3
allele frequency: 2.477536997885835e-5
allele num: 121088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.282+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.282+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.543+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.123+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.123+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.543+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.123+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.282+25C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.543+25C>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS

4-26921294-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921294
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921294
    reference: chr 4
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.123+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.123+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.123+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.543+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.543+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.282+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.282+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.282+38A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.543+38A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4028
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

4-26921296-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921296
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921296
    reference: chr 4
allele count: 5
allele frequency: 4.131753350851967e-5
allele num: 121014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.123+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.282+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.282+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.543+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.282+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.123+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.543+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.123+40A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.543+40A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

4-26921301-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26921301
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26921301
    reference: chr 4
allele count: 1
allele frequency: 8.267195767195768e-6
allele num: 120960
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.282+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.282+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.543+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.543+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.123+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.543+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.123+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.282+45G>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.123+45G>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-26959184-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959184
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959184
    reference: chr 4
allele count: 1
allele frequency: 8.856768342367236e-6
allele num: 112908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-50A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-50A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-26959190-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959190
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959190
    reference: chr 4
allele count: 2
allele frequency: 1.768628075202066e-5
allele num: 113082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-44A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-44A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

4-26959201-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959201
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959201
    reference: chr 4
allele count: 2
allele frequency: 1.757314822950532e-5
allele num: 113810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-33T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-33T>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4145
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17005
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

4-26959204-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959204
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959204
    reference: chr 4
allele count: 4
allele frequency: 3.505082369435682e-5
allele num: 114120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-30A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-30A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3342
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

4-26959205-TATTTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959205
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959200
    reference: chr 4
allele count: 3
allele frequency: 2.625590757920532e-5
allele num: 114260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-27_283-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-27_544-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-27_124-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-27_124-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-27_544-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-27_544-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-27_124-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-27_283-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-27_283-23delTTTAA
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15104
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17020
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5571
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: TATTTA
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

4-26959206-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959206
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959206
    reference: chr 4
allele count: 1
allele frequency: 8.741411563139215e-6
allele num: 114398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-28A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-28A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14053
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

4-26959207-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959207
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959207
    reference: chr 4
allele count: 25757
allele frequency: 2.216304123356509e-1
allele num: 116216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-27T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-27T>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 423
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 6.25e1
  variant carriers: 1463
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.25e1
  variant carriers: 763
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 7.5e0
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 3.25e1
  variant carriers: 1585
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.25e1
  variant carriers: 745
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.75e1
  variant carriers: 1028
genotype depth: GenotypeDepth
  all individuals: 11204
  bin: 2.25e1
  variant carriers: 1096
genotype depth: GenotypeDepth
  all individuals: 8419
  bin: 2.75e1
  variant carriers: 1232
genotype depth: GenotypeDepth
  all individuals: 4606
  bin: 4.25e1
  variant carriers: 2395
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 3.75e1
  variant carriers: 2118
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 8.75e1
  variant carriers: 337
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 5.75e1
  variant carriers: 1852
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 1047
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.25e1
  variant carriers: 2194
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.75e1
  variant carriers: 586
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.25e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 1175
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 4.75e1
  variant carriers: 2411
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 9.25e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 18
num of homozygotes: 3047
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

4-26959207-TTTAAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959207
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959202
    reference: chr 4
allele count: 1
allele frequency: 8.604667171473808e-6
allele num: 116216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-22_124-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-22_283-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-22_124-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-22_124-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-22_544-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-22_544-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-22_544-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-22_283-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-22_283-18delCTTAA
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: TTTAAC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-26959216-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959216
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959216
    reference: chr 4
allele count: 1
allele frequency: 8.493723138600575e-6
allele num: 117734
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-18A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-18A>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

4-26959223-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959223
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959223
    reference: chr 4
allele count: 1
allele frequency: 8.43127666391245e-6
allele num: 118606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-11C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-11C>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3931
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

4-26959230-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959230
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959230
    reference: chr 4
allele count: 8
allele frequency: 6.687733025697613e-5
allele num: 119622
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-4A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-4A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5780
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3306
  bin: 9.25e1
  variant carriers: 0
hgvs: c.283-4A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

4-26959231-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959231
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959231
    reference: chr 4
allele count: 1
allele frequency: 8.354079296920687e-6
allele num: 119702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.124-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.124-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.283-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.283-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.124-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.544-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.544-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.544-3T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.283-3T>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: c.283-3T>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-26959237-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959237
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959237
    reference: chr 4
allele count: 1
allele frequency: 8.318083513558476e-6
allele num: 120220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.286A>T
  hgvsp: ENSP00000419383.1:p.Ile96Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.127A>T
  hgvsp: ENSP00000473527.1:p.Ile43Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.547A>T
  hgvsp: ENSP00000237364.5:p.Ile183Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.127A>T
  hgvsp: ENSP00000473581.1:p.Ile43Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.286A>T
  hgvsp: ENSP00000417569.1:p.Ile96Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.127A>T
  hgvsp: ENSP00000473283.1:p.Ile43Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.547A>T
  hgvsp: ENSP00000371439.3:p.Ile183Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.286A>T
  hgvsp: ENSP00000419073.1:p.Ile96Phe
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.547A>T
  hgvsp: ENSP00000404812.2:p.Ile183Phe
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4382
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile96Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

4-26959283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959283
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959283
    reference: chr 4
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.173A>G
  hgvsp: ENSP00000473527.1:p.His58Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.332A>G
  hgvsp: ENSP00000417569.1:p.His111Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.593A>G
  hgvsp: ENSP00000371439.3:p.His198Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.173A>G
  hgvsp: ENSP00000473283.1:p.His58Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.593A>G
  hgvsp: ENSP00000237364.5:p.His198Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.173A>G
  hgvsp: ENSP00000473581.1:p.His58Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.332A>G
  hgvsp: ENSP00000419383.1:p.His111Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.332A>G
  hgvsp: ENSP00000419073.1:p.His111Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.593A>G
  hgvsp: ENSP00000404812.2:p.His198Arg
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His111Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

4-26959302-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959302
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959302
    reference: chr 4
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.192A>G
  hgvsp: ENST00000478049.1:c.192A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.192A>G
  hgvsp: ENST00000494628.2:c.192A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.612A>G
  hgvsp: ENST00000412829.2:c.612A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.192A>G
  hgvsp: ENST00000463501.1:c.192A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.351A>G
  hgvsp: ENST00000465503.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.351A>G
  hgvsp: ENST00000467087.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.612A>G
  hgvsp: ENST00000237364.5:c.612A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.351A>G
  hgvsp: ENST00000467011.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.612A>G
  hgvsp: ENST00000382009.3:c.612A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys117Lys
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

4-26959305-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959305
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959305
    reference: chr 4
allele count: 10
allele frequency: 8.246878556466377e-5
allele num: 121258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.354T>C
  hgvsp: ENST00000467087.1:c.354T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.195T>C
  hgvsp: ENST00000463501.1:c.195T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.615T>C
  hgvsp: ENST00000412829.2:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.615T>C
  hgvsp: ENST00000237364.5:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.195T>C
  hgvsp: ENST00000478049.1:c.195T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.354T>C
  hgvsp: ENST00000465503.1:c.354T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.195T>C
  hgvsp: ENST00000494628.2:c.195T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.615T>C
  hgvsp: ENST00000382009.3:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.354T>C
  hgvsp: ENST00000467011.1:c.354T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His118His
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

4-26959311-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959311
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959311
    reference: chr 4
allele count: 2
allele frequency: 1.649266900862567e-5
allele num: 121266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.621G>A
  hgvsp: ENST00000382009.3:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.201G>A
  hgvsp: ENST00000494628.2:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.360G>A
  hgvsp: ENST00000465503.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.621G>A
  hgvsp: ENST00000412829.2:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.201G>A
  hgvsp: ENST00000478049.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.360G>A
  hgvsp: ENST00000467011.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.360G>A
  hgvsp: ENST00000467087.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.621G>A
  hgvsp: ENST00000237364.5:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.201G>A
  hgvsp: ENST00000463501.1:c.201G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20554
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr120Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

4-26959329-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959329
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959329
    reference: chr 4
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.219A>G
  hgvsp: ENST00000478049.1:c.219A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.219A>G
  hgvsp: ENST00000463501.1:c.219A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.378A>G
  hgvsp: ENST00000465503.1:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.639A>G
  hgvsp: ENST00000237364.5:c.639A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.378A>G
  hgvsp: ENST00000467087.1:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.639A>G
  hgvsp: ENST00000412829.2:c.639A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.219A>G
  hgvsp: ENST00000494628.2:c.219A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.378A>G
  hgvsp: ENST00000467011.1:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.639A>G
  hgvsp: ENST00000382009.3:c.639A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys126Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

4-26959331-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959331
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959331
    reference: chr 4
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.641G>A
  hgvsp: ENSP00000371439.3:p.Arg214Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.641G>A
  hgvsp: ENSP00000237364.5:p.Arg214Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.380G>A
  hgvsp: ENSP00000419073.1:p.Arg127Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.380G>A
  hgvsp: ENSP00000417569.1:p.Arg127Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.380G>A
  hgvsp: ENSP00000419383.1:p.Arg127Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.221G>A
  hgvsp: ENSP00000473527.1:p.Arg74Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.221G>A
  hgvsp: ENSP00000473581.1:p.Arg74Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.641G>A
  hgvsp: ENSP00000404812.2:p.Arg214Gln
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.221G>A
  hgvsp: ENSP00000473283.1:p.Arg74Gln
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16856
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg127Gln
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-26959338-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959338
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959338
    reference: chr 4
allele count: 2
allele frequency: 1.649593375233005e-5
allele num: 121242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.648A>G
  hgvsp: ENST00000412829.2:c.648A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.648A>G
  hgvsp: ENST00000382009.3:c.648A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.648A>G
  hgvsp: ENST00000237364.5:c.648A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.228A>G
  hgvsp: ENST00000478049.1:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.228A>G
  hgvsp: ENST00000463501.1:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.228A>G
  hgvsp: ENST00000494628.2:c.228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.387A>G
  hgvsp: ENST00000465503.1:c.387A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.387A>G
  hgvsp: ENST00000467011.1:c.387A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.387A>G
  hgvsp: ENST00000467087.1:c.387A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys129Lys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

4-26959344-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959344
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959344
    reference: chr 4
allele count: 7
allele frequency: 5.774529375855868e-5
allele num: 121222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.234A>G
  hgvsp: ENST00000494628.2:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.234A>G
  hgvsp: ENST00000463501.1:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.393A>G
  hgvsp: ENST00000467087.1:c.393A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.393A>G
  hgvsp: ENST00000465503.1:c.393A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.393A>G
  hgvsp: ENST00000467011.1:c.393A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.654A>G
  hgvsp: ENST00000237364.5:c.654A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.654A>G
  hgvsp: ENST00000382009.3:c.654A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.234A>G
  hgvsp: ENST00000478049.1:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.654A>G
  hgvsp: ENST00000412829.2:c.654A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5955
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser131Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/4-26959358-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959358
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959358
    reference: chr 4
allele count: 2
allele frequency: 1.650600818698006e-5
allele num: 121168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+10C>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+10C>A
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4460
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

4-26959371-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959371
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959370
    reference: chr 4
allele count: 4
allele frequency: 3.304747269452568e-5
allele num: 121038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+28delC
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+28delC
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14938
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9474
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20552
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: GC
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-26959376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959376
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959376
    reference: chr 4
allele count: 1
allele frequency: 8.263506701703935e-6
allele num: 121014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+28C>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+28C>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4086
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20540
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-26959386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959386
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959386
    reference: chr 4
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+38G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+38G>A
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5774
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

4-26959386-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959386
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959386
    reference: chr 4
allele count: 22
allele frequency: 1.82037830771013e-4
allele num: 120854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+38G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+38G>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10424
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6621
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4930
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4066
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-26959390-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959390
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959390
    reference: chr 4
allele count: 1
allele frequency: 8.278282753025713e-6
allele num: 120798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+42A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+42A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14696
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/4-26959394-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959394
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959394
    reference: chr 4
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+46A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+46A>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3371
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS

4-26959396-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26959396
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26959396
    reference: chr 4
allele count: 2
allele frequency: 1.656342134031205e-5
allele num: 120748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.238+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.397+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.397+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.397+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.238+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.658+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.238+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.658+48C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.658+48C>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9278
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10323
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20523
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

4-26996952-C-CTGAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26996952
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26996956
    reference: chr 4
allele count: 2
allele frequency: 1.747762863534676e-5
allele num: 114432
alternate allele: CTGAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.239-48_239-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.659-48_659-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.239-48_239-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.398-48_398-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.659-48_659-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.659-48_659-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.398-48_398-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.398-48_398-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.239-48_239-45dupTGAA
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16754
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4491
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

4-26996953-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26996953
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26996953
    reference: chr 4
allele count: 8
allele frequency: 6.985801358738364e-5
allele num: 114518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.398-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.239-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.398-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.398-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.659-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.659-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.239-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.659-48T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.239-48T>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4490
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum

4-26996954-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26996954
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26996954
    reference: chr 4
allele count: 1
allele frequency: 8.732099196646874e-6
allele num: 114520
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.398-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.659-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.398-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.239-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.659-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.659-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.239-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.239-47G>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.398-47G>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

4-26996960-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26996960
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26996960
    reference: chr 4
allele count: 1
allele frequency: 8.718851901581599e-6
allele num: 114694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.239-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.239-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.659-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.398-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.239-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.659-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.659-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.398-41A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.398-41A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

4-26996990-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26996990
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26996990
    reference: chr 4
allele count: 4
allele frequency: 3.420499050811514e-5
allele num: 116942
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.398-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.239-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.398-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.659-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.239-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.659-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.659-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.239-11A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.398-11A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10993
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

4-26996992-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26996992
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26996992
    reference: chr 4
allele count: 6
allele frequency: 5.121638924455826e-5
allele num: 117150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.398-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.239-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.398-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.659-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.659-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.659-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.239-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.239-9C>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.398-9C>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10992
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

4-26997004-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997004
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997004
    reference: chr 4
allele count: 2
allele frequency: 1.682114080976972e-5
allele num: 118898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.242A>G
  hgvsp: ENSP00000473581.1:p.His81Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.662A>G
  hgvsp: ENSP00000237364.5:p.His221Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.401A>G
  hgvsp: ENSP00000419073.1:p.His134Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.662A>G
  hgvsp: ENSP00000404812.2:p.His221Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.662A>G
  hgvsp: ENSP00000371439.3:p.His221Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.401A>G
  hgvsp: ENSP00000417569.1:p.His134Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.242A>G
  hgvsp: ENSP00000473283.1:p.His81Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.242A>G
  hgvsp: ENSP00000473527.1:p.His81Arg
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.401A>G
  hgvsp: ENSP00000419383.1:p.His134Arg
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4512
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His134Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

4-26997004-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997004
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997004
    reference: chr 4
allele count: 1
allele frequency: 8.410570404884859e-6
allele num: 118898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.662A>T
  hgvsp: ENSP00000404812.2:p.His221Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.401A>T
  hgvsp: ENSP00000417569.1:p.His134Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.662A>T
  hgvsp: ENSP00000237364.5:p.His221Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.662A>T
  hgvsp: ENSP00000371439.3:p.His221Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.242A>T
  hgvsp: ENSP00000473581.1:p.His81Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.401A>T
  hgvsp: ENSP00000419383.1:p.His134Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.401A>T
  hgvsp: ENSP00000419073.1:p.His134Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.242A>T
  hgvsp: ENSP00000473527.1:p.His81Leu
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.242A>T
  hgvsp: ENSP00000473283.1:p.His81Leu
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3585
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His134Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

4-26997008-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997008
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997008
    reference: chr 4
allele count: 1
allele frequency: 8.382791804982731e-6
allele num: 119292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.666T>C
  hgvsp: ENST00000412829.2:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.666T>C
  hgvsp: ENST00000237364.5:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.405T>C
  hgvsp: ENST00000465503.1:c.405T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.246T>C
  hgvsp: ENST00000494628.2:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.405T>C
  hgvsp: ENST00000467011.1:c.405T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.246T>C
  hgvsp: ENST00000478049.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.405T>C
  hgvsp: ENST00000467087.1:c.405T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.246T>C
  hgvsp: ENST00000463501.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.666T>C
  hgvsp: ENST00000382009.3:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn135Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

4-26997018-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997018
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997018
    reference: chr 4
allele count: 3
allele frequency: 2.497752023179139e-5
allele num: 120108
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.415G>A
  hgvsp: ENSP00000417569.1:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.415G>A
  hgvsp: ENSP00000419073.1:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.676G>A
  hgvsp: ENSP00000371439.3:p.Glu226Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.415G>A
  hgvsp: ENSP00000419383.1:p.Glu139Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.256G>A
  hgvsp: ENSP00000473283.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.676G>A
  hgvsp: ENSP00000404812.2:p.Glu226Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.256G>A
  hgvsp: ENSP00000473581.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.676G>A
  hgvsp: ENSP00000237364.5:p.Glu226Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.256G>A
  hgvsp: ENSP00000473527.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu139Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/4-26997022-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997022
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997022
    reference: chr 4
allele count: 2
allele frequency: 1.662593313049695e-5
allele num: 120294
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.419A>C
  hgvsp: ENSP00000417569.1:p.Asp140Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.419A>C
  hgvsp: ENSP00000419073.1:p.Asp140Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.680A>C
  hgvsp: ENSP00000371439.3:p.Asp227Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.680A>C
  hgvsp: ENSP00000404812.2:p.Asp227Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.260A>C
  hgvsp: ENSP00000473283.1:p.Asp87Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.419A>C
  hgvsp: ENSP00000419383.1:p.Asp140Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.260A>C
  hgvsp: ENSP00000473527.1:p.Asp87Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.680A>C
  hgvsp: ENSP00000237364.5:p.Asp227Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.260A>C
  hgvsp: ENSP00000473581.1:p.Asp87Ala
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp140Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

4-26997022-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997022
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997022
    reference: chr 4
allele count: 3
allele frequency: 2.493889969574542e-5
allele num: 120294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.419A>G
  hgvsp: ENSP00000419383.1:p.Asp140Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.680A>G
  hgvsp: ENSP00000237364.5:p.Asp227Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.260A>G
  hgvsp: ENSP00000473527.1:p.Asp87Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.260A>G
  hgvsp: ENSP00000473283.1:p.Asp87Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473581
  ensembl transcript: ENST00000478049
  gene symbol: STIM2
  hgvsc: ENST00000478049.1:c.260A>G
  hgvsp: ENSP00000473581.1:p.Asp87Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.680A>G
  hgvsp: ENSP00000404812.2:p.Asp227Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.680A>G
  hgvsp: ENSP00000371439.3:p.Asp227Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.419A>G
  hgvsp: ENSP00000419073.1:p.Asp140Gly
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.419A>G
  hgvsp: ENSP00000417569.1:p.Asp140Gly
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25761
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp140Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

4-26997039-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997039
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997039
    reference: chr 4
allele count: 4
allele frequency: 3.310819758972322e-5
allele num: 120816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.436A>G
  hgvsp: ENSP00000419073.1:p.Ile146Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.436A>G
  hgvsp: ENSP00000419383.1:p.Ile146Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.697A>G
  hgvsp: ENSP00000404812.2:p.Ile233Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.436A>G
  hgvsp: ENSP00000417569.1:p.Ile146Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.697A>G
  hgvsp: ENSP00000371439.3:p.Ile233Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.277A>G
  hgvsp: ENSP00000473283.1:p.Ile93Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.277A>G
  hgvsp: ENSP00000473527.1:p.Ile93Val
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.697A>G
  hgvsp: ENSP00000237364.5:p.Ile233Val
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile146Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

4-26997057-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997057
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997057
    reference: chr 4
allele count: 15
allele frequency: 1.240633219195077e-4
allele num: 120906
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.295C>G
  hgvsp: ENSP00000473283.1:p.Pro99Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.454C>G
  hgvsp: ENSP00000419073.1:p.Pro152Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.454C>G
  hgvsp: ENSP00000419383.1:p.Pro152Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.454C>G
  hgvsp: ENSP00000417569.1:p.Pro152Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.715C>G
  hgvsp: ENSP00000404812.2:p.Pro239Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.295C>G
  hgvsp: ENSP00000473527.1:p.Pro99Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.715C>G
  hgvsp: ENSP00000237364.5:p.Pro239Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.715C>G
  hgvsp: ENSP00000371439.3:p.Pro239Ala
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro152Ala
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

4-26997059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997059
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997059
    reference: chr 4
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.717C>T
  hgvsp: ENST00000382009.3:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.456C>T
  hgvsp: ENST00000467087.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.297C>T
  hgvsp: ENST00000463501.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.717C>T
  hgvsp: ENST00000412829.2:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.456C>T
  hgvsp: ENST00000465503.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.717C>T
  hgvsp: ENST00000237364.5:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.297C>T
  hgvsp: ENST00000494628.2:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.456C>T
  hgvsp: ENST00000467011.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26269
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7547
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro152Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

4-26997062-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997062
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997062
    reference: chr 4
allele count: 2
allele frequency: 1.654095540558423e-5
allele num: 120912
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.300A>G
  hgvsp: ENST00000494628.2:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.720A>G
  hgvsp: ENST00000382009.3:c.720A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.459A>G
  hgvsp: ENST00000467011.1:c.459A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.720A>G
  hgvsp: ENST00000412829.2:c.720A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.300A>G
  hgvsp: ENST00000463501.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.459A>G
  hgvsp: ENST00000465503.1:c.459A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.720A>G
  hgvsp: ENST00000237364.5:c.720A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.459A>G
  hgvsp: ENST00000467087.1:c.459A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26215
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln153Gln
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

4-26997065-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997065
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997065
    reference: chr 4
allele count: 3
allele frequency: 2.481635894381576e-5
allele num: 120888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.303T>C
  hgvsp: ENST00000494628.2:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.462T>C
  hgvsp: ENST00000467011.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.723T>C
  hgvsp: ENST00000412829.2:c.723T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.723T>C
  hgvsp: ENST00000382009.3:c.723T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.723T>C
  hgvsp: ENST00000237364.5:c.723T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.462T>C
  hgvsp: ENST00000465503.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.303T>C
  hgvsp: ENST00000463501.1:c.303T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.462T>C
  hgvsp: ENST00000467087.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7549
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr154Tyr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

4-26997066-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997066
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997066
    reference: chr 4
allele count: 1
allele frequency: 8.271982794275789e-6
allele num: 120890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.724G>A
  hgvsp: ENSP00000404812.2:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.724G>A
  hgvsp: ENSP00000237364.5:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.304G>A
  hgvsp: ENSP00000473283.1:p.Glu102Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.304G>A
  hgvsp: ENSP00000473527.1:p.Glu102Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.463G>A
  hgvsp: ENSP00000419383.1:p.Glu155Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.724G>A
  hgvsp: ENSP00000371439.3:p.Glu242Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.463G>A
  hgvsp: ENSP00000417569.1:p.Glu155Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.463G>A
  hgvsp: ENSP00000419073.1:p.Glu155Lys
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7549
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu155Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

4-26997074-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997074
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997074
    reference: chr 4
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.471T>A
  hgvsp: ENSP00000419383.1:p.Asn157Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.732T>A
  hgvsp: ENSP00000371439.3:p.Asn244Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.471T>A
  hgvsp: ENSP00000417569.1:p.Asn157Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.732T>A
  hgvsp: ENSP00000237364.5:p.Asn244Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.312T>A
  hgvsp: ENSP00000473283.1:p.Asn104Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.471T>A
  hgvsp: ENSP00000419073.1:p.Asn157Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.312T>A
  hgvsp: ENSP00000473527.1:p.Asn104Lys
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.732T>A
  hgvsp: ENSP00000404812.2:p.Asn244Lys
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn157Lys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

4-26997079-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997079
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997079
    reference: chr 4
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.317G>T
  hgvsp: ENSP00000473283.1:p.Arg106Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.737G>T
  hgvsp: ENSP00000404812.2:p.Arg246Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.737G>T
  hgvsp: ENSP00000237364.5:p.Arg246Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.476G>T
  hgvsp: ENSP00000417569.1:p.Arg159Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.317G>T
  hgvsp: ENSP00000473527.1:p.Arg106Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.476G>T
  hgvsp: ENSP00000419073.1:p.Arg159Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.737G>T
  hgvsp: ENSP00000371439.3:p.Arg246Ile
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.476G>T
  hgvsp: ENSP00000419383.1:p.Arg159Ile
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2585
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg159Ile
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

4-26997086-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997086
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997086
    reference: chr 4
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.483C>T
  hgvsp: ENST00000465503.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.744C>T
  hgvsp: ENST00000382009.3:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.744C>T
  hgvsp: ENST00000412829.2:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.483C>T
  hgvsp: ENST00000467011.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.483C>T
  hgvsp: ENST00000467087.1:c.483C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.324C>T
  hgvsp: ENST00000494628.2:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.324C>T
  hgvsp: ENST00000463501.1:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.744C>T
  hgvsp: ENST00000237364.5:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4502
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn161Asn
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/4-26997087-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997087
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997087
    reference: chr 4
allele count: 2
allele frequency: 1.659255326209597e-5
allele num: 120536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.745A>C
  hgvsp: ENSP00000404812.2:p.Asn249His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.325A>C
  hgvsp: ENSP00000473283.1:p.Asn109His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.325A>C
  hgvsp: ENSP00000473527.1:p.Asn109His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.484A>C
  hgvsp: ENSP00000419073.1:p.Asn162His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.745A>C
  hgvsp: ENSP00000237364.5:p.Asn249His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.484A>C
  hgvsp: ENSP00000417569.1:p.Asn162His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.484A>C
  hgvsp: ENSP00000419383.1:p.Asn162His
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.745A>C
  hgvsp: ENSP00000371439.3:p.Asn249His
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn162His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

4-26997089-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997089
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997089
    reference: chr 4
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.327T>C
  hgvsp: ENST00000463501.1:c.327T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.747T>C
  hgvsp: ENST00000237364.5:c.747T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.327T>C
  hgvsp: ENST00000494628.2:c.327T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.747T>C
  hgvsp: ENST00000412829.2:c.747T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.486T>C
  hgvsp: ENST00000467087.1:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.486T>C
  hgvsp: ENST00000465503.1:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.747T>C
  hgvsp: ENST00000382009.3:c.747T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.486T>C
  hgvsp: ENST00000467011.1:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn162Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

4-26997099-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997099
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997099
    reference: chr 4
allele count: 1
allele frequency: 8.348499774590506e-6
allele num: 119782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.757A>G
  hgvsp: ENSP00000404812.2:p.Thr253Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.757A>G
  hgvsp: ENSP00000237364.5:p.Thr253Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.757A>G
  hgvsp: ENSP00000371439.3:p.Thr253Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.337A>G
  hgvsp: ENSP00000473283.1:p.Thr113Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.496A>G
  hgvsp: ENSP00000417569.1:p.Thr166Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.496A>G
  hgvsp: ENSP00000419073.1:p.Thr166Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.496A>G
  hgvsp: ENSP00000419383.1:p.Thr166Ala
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.337A>G
  hgvsp: ENSP00000473527.1:p.Thr113Ala
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr166Ala
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

4-26997100-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997100
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997100
    reference: chr 4
allele count: 5
allele frequency: 4.180602006688963e-5
allele num: 119600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.497C>T
  hgvsp: ENSP00000419073.1:p.Thr166Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.338C>T
  hgvsp: ENSP00000473527.1:p.Thr113Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.338C>T
  hgvsp: ENSP00000473283.1:p.Thr113Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.497C>T
  hgvsp: ENSP00000417569.1:p.Thr166Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.497C>T
  hgvsp: ENSP00000419383.1:p.Thr166Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.758C>T
  hgvsp: ENSP00000237364.5:p.Thr253Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.758C>T
  hgvsp: ENSP00000404812.2:p.Thr253Met
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.758C>T
  hgvsp: ENSP00000371439.3:p.Thr253Met
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr166Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

4-26997115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997115
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997115
    reference: chr 4
allele count: 1
allele frequency: 8.463817181548878e-6
allele num: 118150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+3G>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+3G>A
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10947
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22471
  bin: 6.25e1
  variant carriers: 0
hgvs: c.509+3G>A
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS

4-26997116-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997116
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997116
    reference: chr 4
allele count: 1
allele frequency: 8.476300264460568e-6
allele num: 117976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+4A>T
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+4A>T
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
hgvs: c.509+4A>T
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

4-26997122-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997122
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997122
    reference: chr 4
allele count: 1
allele frequency: 8.506728822498597e-6
allele num: 117554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+10T>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+10T>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

4-26997125-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997125
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997125
    reference: chr 4
allele count: 1
allele frequency: 8.538542983025377e-6
allele num: 117116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+13T>A
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+13T>A
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20867
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4434
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3556
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-26997126-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997126
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997126
    reference: chr 4
allele count: 1
allele frequency: 8.537522410996328e-6
allele num: 117130
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+14A>C
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+14A>C
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20958
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

4-26997126-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997126
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997126
    reference: chr 4
allele count: 3
allele frequency: 2.561256723298899e-5
allele num: 117130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+14A>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+14A>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4435
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7088
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

4-26997133-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 26997133
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 26997133
    reference: chr 4
allele count: 1
allele frequency: 8.570449091532397e-6
allele num: 116680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473527
  ensembl transcript: ENST00000494628
  gene symbol: STIM2
  hgvsc: ENST00000494628.2:c.350+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000371439
  ensembl transcript: ENST00000382009
  gene symbol: STIM2
  hgvsc: ENST00000382009.3:c.770+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419073
  ensembl transcript: ENST00000467087
  gene symbol: STIM2
  hgvsc: ENST00000467087.1:c.509+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000404812
  ensembl transcript: ENST00000412829
  gene symbol: STIM2
  hgvsc: ENST00000412829.2:c.770+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000473283
  ensembl transcript: ENST00000463501
  gene symbol: STIM2
  hgvsc: ENST00000463501.1:c.350+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000419383
  ensembl transcript: ENST00000467011
  gene symbol: STIM2
  hgvsc: ENST00000467011.1:c.509+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000417569
  ensembl transcript: ENST00000465503
  gene symbol: STIM2
  hgvsc: ENST00000465503.1:c.509+21T>G
  variant of: http://identifiers.org/hgnc/19205
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109689
  ensembl protein: ENSP00000237364
  ensembl transcript: ENST00000237364
  gene symbol: STIM2
  hgvsc: ENST00000237364.5:c.770+21T>G
  variant of: http://identifiers.org/hgnc/19205
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7361
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3671
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31224
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1976
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 1.591e0

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

QD
type: SiteQuality
SIO_000300: 9.550000000000001e0

DP
type: SiteQuality
SIO_000300: 2.965826e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3562
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31224
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3670
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

FS
type: SiteQuality
SIO_000300: 1.522e0

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.965782e6

VQSLOD
type: SiteQuality
SIO_000300: -2.734e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.153e0

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
all individuals: 10134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4488
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.495e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 2.965779e6

MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.628e0

FS
type: SiteQuality
SIO_000300: 6.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3668
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4472
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3527
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31221
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.24e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.679e0

MQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

FS
type: SiteQuality
SIO_000300: 7.697e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.26e-1

DP
type: SiteQuality
SIO_000300: 2.963259e6

GenotypeQuality
all individuals: 3541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31208
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.735207357279195e-4
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: -2.235e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

QD
type: SiteQuality
SIO_000300: 1.156e1

DP
type: SiteQuality
SIO_000300: 2.953382e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.44e-1

FS
type: SiteQuality
SIO_000300: 1.7379e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.55e0

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31197
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.478664192949907e-4
allele num: 8624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.797e0

QD
type: SiteQuality
SIO_000300: 1.159e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

DP
type: SiteQuality
SIO_000300: 2.94543e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

FS
type: SiteQuality
SIO_000300: 7.048e0

GenotypeQuality
all individuals: 586
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3421
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31186
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3638
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.93e0

MQ
type: SiteQuality
SIO_000300: 5.807e1

DP
type: SiteQuality
SIO_000300: 2.923891e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.084e0

VQSLOD
type: SiteQuality
SIO_000300: -2.722e0

FS
type: SiteQuality
SIO_000300: 1.8681e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.42e1

GenotypeQuality
all individuals: 1885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3981
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31189
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.341785342132685e-4
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

FS
type: SiteQuality
SIO_000300: 5.881e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.919864e6

VQSLOD
type: SiteQuality
SIO_000300: 6.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.22e-1

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3629
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6886
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.376e0

QD
type: SiteQuality
SIO_000300: 2.128e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.028e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.913363e6

FS
type: SiteQuality
SIO_000300: 6.791e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.118e0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
all individuals: 4865
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16930
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2081
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2737
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63818
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.230012300123001e-4
allele num: 8130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.449e0

DP
type: SiteQuality
SIO_000300: 1.846096e6

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.429e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.087e0

GenotypeQuality
all individuals: 1886
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16953
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3968
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9559
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4336
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.083333333333333e-4
allele num: 9600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.04e0

DP
type: SiteQuality
SIO_000300: 1.864071e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.406e0

QD
type: SiteQuality
SIO_000300: 1.953e1

FS
type: SiteQuality
SIO_000300: 3.811e0

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.73e-1

GenotypeQuality
all individuals: 1383
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12932
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4585
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.116624072804338e-5
allele num: 64172
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.04e-1

FS
type: SiteQuality
SIO_000300: 3.534e0

QD
type: SiteQuality
SIO_000300: 1.331e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 1.904933e6

VQSLOD
type: SiteQuality
SIO_000300: 4.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5539
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17015
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1171
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4604
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2935
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.888888888888889e-5
allele num: 11250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.664759298420201e-5
allele num: 64312
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.611e1

DP
type: SiteQuality
SIO_000300: 1.914627e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.13e0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13861
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4177
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.505117399157134e-4
allele num: 13288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553036185743128e-5
allele num: 64390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.917537e6

MQRankSum
type: SiteQuality
SIO_000300: -2.533e0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.31e-1

MQ
type: SiteQuality
SIO_000300: 5.192e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 3.689e0

QD
type: SiteQuality
SIO_000300: 1.008e1

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17016
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2989
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3349
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2954
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551638530287984e-5
allele num: 64448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.773e0

DP
type: SiteQuality
SIO_000300: 1.920962e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

MQRankSum
type: SiteQuality
SIO_000300: -8.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.519e0

QD
type: SiteQuality
SIO_000300: 2.179e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 2922
bin: 7.75e1
variant carriers: 100

GenotypeQuality
all individuals: 1375
bin: 8.75e1
variant carriers: 60

GenotypeQuality
all individuals: 9778
bin: 6.25e1
variant carriers: 97

GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 80

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 17

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 41

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 40

GenotypeQuality
all individuals: 534
bin: 2.75e1
variant carriers: 21

GenotypeQuality
all individuals: 2028
bin: 7.25e1
variant carriers: 74

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 11

GenotypeQuality
all individuals: 207
bin: 5.25e1
variant carriers: 74

GenotypeQuality
all individuals: 2609
bin: 8.25e1
variant carriers: 107

GenotypeQuality
all individuals: 3888
bin: 6.75e1
variant carriers: 79

GenotypeQuality
all individuals: 31048
bin: 9.75e1
variant carriers: 21875

East Asian
type: Population
allele count: 3415
allele frequency: 4.053893637226971e-1
allele num: 8424
num of homozygotes: 701

European (Finnish)
type: Population
allele count: 1241
allele frequency: 1.893500152578578e-1
allele num: 6554
num of homozygotes: 104

South Asian
type: Population
allele count: 4174
allele frequency: 2.899013751909987e-1
allele num: 14398
num of homozygotes: 585

African
type: Population
allele count: 2036
allele frequency: 2.072897576868255e-1
allele num: 9822
num of homozygotes: 203

Other
type: Population
allele count: 188
allele frequency: 2.170900692840647e-1
allele num: 866
num of homozygotes: 20

Latino
type: Population
allele count: 2684
allele frequency: 2.380698953343977e-1
allele num: 11274
num of homozygotes: 314

European (Non-Finnish)
type: Population
allele count: 12019
allele frequency: 1.85255402447671e-1
allele num: 64878
num of homozygotes: 1120

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.75e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.81e-2

DP
type: SiteQuality
SIO_000300: 2.3159e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.021e1

GenotypeQuality
all individuals: 2922
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31048
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541354542371836e-5
allele num: 64878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.75e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

DP
type: SiteQuality
SIO_000300: 2.3159e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

QD
type: SiteQuality
SIO_000300: 2.021e1

GenotypeQuality
all individuals: 5557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14924
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008471157724889e-4
allele num: 9916
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.19e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.703e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

DP
type: SiteQuality
SIO_000300: 2.214042e6

GenotypeQuality
all individuals: 1223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3289
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20497
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5650
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.520605112154408e-5
allele num: 15336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.19e0

MQRankSum
type: SiteQuality
SIO_000300: -1.128e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.228796e6

VQSLOD
type: SiteQuality
SIO_000300: -2.781e0

QD
type: SiteQuality
SIO_000300: 2.161e1

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4344
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3972
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20509
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.558807522525247e-5
allele num: 66148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.98019801980198e-4
allele num: 10100
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.303580433686334e-5
allele num: 15864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.91e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.243464e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.432e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

QD
type: SiteQuality
SIO_000300: 3.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.41e-1

GenotypeQuality
all individuals: 2121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5794
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511350240304688e-5
allele num: 66166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.244378e6

FS
type: SiteQuality
SIO_000300: 2.148e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

QD
type: SiteQuality
SIO_000300: 1.476e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e0

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeQuality
all individuals: 3331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5845
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4013
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16475
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20519
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.790483649892304e-5
allele num: 10214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16146
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

QD
type: SiteQuality
SIO_000300: 1.118e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 2.292e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 2.251443e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16908
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20546
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3048
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

QD
type: SiteQuality
SIO_000300: 1.07e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

FS
type: SiteQuality
SIO_000300: 6.155e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.265582e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.69e-1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20547
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3048
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.0689e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
SIO_000300: 2.265962e6

VQSLOD
type: SiteQuality
SIO_000300: -2.187e0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5960
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3047
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20554
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 3376
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16912
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4089
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.059137178865729e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.99e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 2.267007e6

QD
type: SiteQuality
SIO_000300: 1.416e1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4090
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3045
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16907
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.24e1

MQ
type: SiteQuality
SIO_000300: 5.946e1

DP
type: SiteQuality
SIO_000300: 2.266335e6

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16853
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3047
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20553
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4090
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

DP
type: SiteQuality
SIO_000300: 2.265882e6

FS
type: SiteQuality
SIO_000300: 2.118e0

QD
type: SiteQuality
SIO_000300: 1.546e1

MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.057e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4090
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4465
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20552
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.718395815170009e-5
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.265942e6

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.354e0

QD
type: SiteQuality
SIO_000300: 1.468e1

VQSLOD
type: SiteQuality
SIO_000300: -2.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.193e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.383e0

GenotypeQuality
all individuals: 5953
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4090
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20553
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3045
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.154e1

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 1.334e0

DP
type: SiteQuality
SIO_000300: 2.265809e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4090
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20557
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3381
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4465
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049506731836037e-4
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

DP
type: SiteQuality
SIO_000300: 2.265814e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

QD
type: SiteQuality
SIO_000300: 1.388e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 5949
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2180
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16677
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20553
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999400119976005e-5
allele num: 66680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 7.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.264915e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.943e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.84e-1

QD
type: SiteQuality
SIO_000300: 1.149e1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4088
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5923
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4451
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.003662233962717e-5
allele num: 66626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.263544e6

MQ
type: SiteQuality
SIO_000300: 6.051e1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

QD
type: SiteQuality
SIO_000300: 1.13e1

FS
type: SiteQuality
SIO_000300: 4.161e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5914
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.26149e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 8.82e0

VQSLOD
type: SiteQuality
SIO_000300: -2.501e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.87e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.187e0

GenotypeQuality
all individuals: 315
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4066
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20540
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

DP
type: SiteQuality
SIO_000300: 2.256562e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.505e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20540
bin: 9.75e1
variant carriers: 22

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.404857812781819e-4
allele num: 66532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.331545814875262e-4
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.759014951627089e-4
allele num: 11370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.037667071688943e-4
allele num: 6584
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 2.256562e6

QD
type: SiteQuality
SIO_000300: 1.505e1

GenotypeQuality
all individuals: 2166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3371
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5727
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20525
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4406
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.39e-1

DP
type: SiteQuality
SIO_000300: 2.253655e6

QD
type: SiteQuality
SIO_000300: 1.615e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

GenotypeQuality
all individuals: 4394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20525
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504166541319455e-5
allele num: 66482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.331e0

MQRankSum
type: SiteQuality
SIO_000300: -7.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.16e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 2.251462e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 13795
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4392
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

QD
type: SiteQuality
SIO_000300: 1.891e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 2.251249e6

GenotypeQuality
all individuals: 124
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11010
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7248
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.668613382279326e-4
allele num: 11986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.33e1

MQRankSum
type: SiteQuality
SIO_000300: -2.507e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.374e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.12e-1

DP
type: SiteQuality
SIO_000300: 2.054555e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 7260
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11008
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.3236224404861e-5
allele num: 12014
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.139534883720931e-4
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

DP
type: SiteQuality
SIO_000300: 2.054917e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
SIO_000300: 1.525e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

GenotypeQuality
all individuals: 355
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20690
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7267
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11001
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12032
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQRankSum
type: SiteQuality
SIO_000300: 4.63e-1

DP
type: SiteQuality
SIO_000300: 2.055088e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.657e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

GenotypeQuality
all individuals: 4491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10998
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.086e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.915e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

DP
type: SiteQuality
SIO_000300: 2.059456e6

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.042e1

GenotypeQuality
all individuals: 23225
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7394
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4503
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.897116134060795e-4
allele num: 10264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65526
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 2.089249e6

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

QD
type: SiteQuality
SIO_000300: 1.574e1

GenotypeQuality
all individuals: 7406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23384
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.869497467861317e-4
allele num: 10268
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

FS
type: SiteQuality
SIO_000300: 6.34e-1

DP
type: SiteQuality
SIO_000300: 2.092525e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.317e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10988
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3011
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24725
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7464
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028284174186906e-5
allele num: 66044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.976e0

QD
type: SiteQuality
SIO_000300: 1.166e1

DP
type: SiteQuality
SIO_000300: 2.110585e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.474e0

FS
type: SiteQuality
SIO_000300: 8.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-1

GenotypeQuality
all individuals: 7464
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24725
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3011
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4512
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10988
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14856
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.86e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.976e0

VQSLOD
type: SiteQuality
SIO_000300: 8.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.474e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 2.110585e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

GenotypeQuality
all individuals: 7474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512172992590352e-5
allele num: 66130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.124e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.114491e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.489e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 3585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10986
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.895752895752896e-4
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 2.124419e6

QD
type: SiteQuality
SIO_000300: 1.248e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.851e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

FS
type: SiteQuality
SIO_000300: 1.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.93e-1

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10985
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3587
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010959894014212e-5
allele num: 66424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.309e1

DP
type: SiteQuality
SIO_000300: 2.126966e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10985
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4520
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.53857791225416e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

DP
type: SiteQuality
SIO_000300: 2.126966e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10980
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 26233
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.012506012506013e-5
allele num: 66528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.744e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.304e1

DP
type: SiteQuality
SIO_000300: 2.132737e6

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26264
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7541
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10978
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.618122977346278e-3
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.516e0

DP
type: SiteQuality
SIO_000300: 2.134486e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10965
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.150818058801821e-5
allele num: 16258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.381e0

QD
type: SiteQuality
SIO_000300: 3.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

DP
type: SiteQuality
SIO_000300: 2.132722e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.94e-1

GenotypeQuality
all individuals: 2587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10964
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00507858280494e-5
allele num: 66554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.132678e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

QD
type: SiteQuality
SIO_000300: 1.385e1

VQSLOD
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.016e0

FS
type: SiteQuality
SIO_000300: 1.186e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10962
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3582
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.50815976918222e-5
allele num: 66546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.11e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.905e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

DP
type: SiteQuality
SIO_000300: 2.132418e6

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10961
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.123e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.360000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.229e0

DP
type: SiteQuality
SIO_000300: 2.132329e6

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10960
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7530
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.738e0

QD
type: SiteQuality
SIO_000300: 1.432e1

VQSLOD
type: SiteQuality
SIO_000300: -2.705e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.4187e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.597e0

DP
type: SiteQuality
SIO_000300: 2.1311e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3025
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7527
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10959
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503623733197005e-5
allele num: 66506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.163e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

FS
type: SiteQuality
SIO_000300: 3.031e0

QD
type: SiteQuality
SIO_000300: 1.303e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.129856e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

GenotypeQuality
all individuals: 7511
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2585
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10959
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25763
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16040
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.127249e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.239e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

QD
type: SiteQuality
SIO_000300: 7.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3012
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10959
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2585
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1739
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505026789476853e-5
allele num: 66444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16012
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.34e0

MQRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 4.42e0

DP
type: SiteQuality
SIO_000300: 2.126841e6

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 1.495e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3575
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10958
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1738
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7510
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25579
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2585
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.219e1

FS
type: SiteQuality
SIO_000300: 1.491e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.017e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 2.125269e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.172e0

GenotypeQuality
all individuals: 3003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2585
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.541e1

DP
type: SiteQuality
SIO_000300: 2.114328e6

FS
type: SiteQuality
SIO_000300: 8.45e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10959
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2585
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.950838860710105e-4
allele num: 15378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66196
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.112545e6

QD
type: SiteQuality
SIO_000300: 1.243e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 6.206e0

MQRankSum
type: SiteQuality
SIO_000300: 7.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

GenotypeQuality
all individuals: 516
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2961
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2933
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4461
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7286
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 2.082743e6

QD
type: SiteQuality
SIO_000300: 1.39e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.657e0

FS
type: SiteQuality
SIO_000300: 4.112e0

GenotypeQuality
all individuals: 7263
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10947
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4463
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522579859313621e-5
allele num: 65678
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

QD
type: SiteQuality
SIO_000300: 1.041e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 1.928e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-2

DP
type: SiteQuality
SIO_000300: 2.077949e6

GenotypeQuality
all individuals: 217
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4458
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10946
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525320317266626e-5
allele num: 65560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14220
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.656e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

DP
type: SiteQuality
SIO_000300: 2.068655e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.382e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2580
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10944
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14010
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.748906386701662e-5
allele num: 11430
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e-1

QD
type: SiteQuality
SIO_000300: 1.246e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

MQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

DP
type: SiteQuality
SIO_000300: 2.058473e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 2.347e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.107e0

GenotypeQuality
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4435
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10946
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.753501400560224e-5
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65414
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 4.469e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

DP
type: SiteQuality
SIO_000300: 2.058042e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10946
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 2
allele frequency: 2.333177788147457e-4
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528724737823707e-5
allele num: 65414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.469e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 2.058042e6

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3927
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4414
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10931
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 7.25e1
variant carriers: 0