16-69988365-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988365
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988365
    reference: chr 16
allele count: 1
allele frequency: 9.370666066944038e-6
allele num: 106716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2336G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.345G>A
  hgvsp: ENST00000393701.2:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.345G>A
  hgvsp: ENST00000568461.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.345G>A
  hgvsp: ENST00000288040.6:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.345G>A
  hgvsp: ENST00000449317.2:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.538G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.435G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10758
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala115Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-69988366-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988366
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988366
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 106750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.436G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2337G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.346G>A
  hgvsp: ENSP00000288040.6:p.Gly116Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.346G>A
  hgvsp: ENSP00000377304.2:p.Gly116Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.346G>A
  hgvsp: ENSP00000454685.1:p.Gly116Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.346G>A
  hgvsp: ENSP00000413990.2:p.Gly116Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.539G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly116Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

16-69988367-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988367
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988367
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 106730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.540G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.437G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.347G>T
  hgvsp: ENSP00000413990.2:p.Gly116Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2338G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.347G>T
  hgvsp: ENSP00000454685.1:p.Gly116Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.347G>T
  hgvsp: ENSP00000288040.6:p.Gly116Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.347G>T
  hgvsp: ENSP00000377304.2:p.Gly116Val
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3341
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly116Val
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-69988368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988368
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988368
    reference: chr 16
allele count: 1
allele frequency: 9.372598271692879e-6
allele num: 106694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.438C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.348C>T
  hgvsp: ENST00000449317.2:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.348C>T
  hgvsp: ENST00000568461.1:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.348C>T
  hgvsp: ENST00000393701.2:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2339C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.541C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.348C>T
  hgvsp: ENST00000288040.6:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3259
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly116Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

16-69988371-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988371
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988371
    reference: chr 16
allele count: 7
allele frequency: 6.559589182300355e-5
allele num: 106714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.351G>C
  hgvsp: ENSP00000454685.1:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.351G>C
  hgvsp: ENSP00000413990.2:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.351G>C
  hgvsp: ENSP00000377304.2:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2342G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.544G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.351G>C
  hgvsp: ENSP00000288040.6:p.Leu117Phe
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.441G>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10909
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21380
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu117Phe
num of homozygotes: 1
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-69988373-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988373
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988373
    reference: chr 16
allele count: 71446
allele frequency: 6.871789939405598e-1
allele num: 103970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.353T>C
  hgvsp: ENSP00000454685.1:p.Val118Ala
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.353T>C
  hgvsp: ENSP00000377304.2:p.Val118Ala
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.546T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.353T>C
  hgvsp: ENSP00000413990.2:p.Val118Ala
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2344T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.443T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.353T>C
  hgvsp: ENSP00000288040.6:p.Val118Ala
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 4.25e1
  variant carriers: 2723
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 5.75e1
  variant carriers: 2426
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 4.75e1
  variant carriers: 2616
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.25e1
  variant carriers: 1678
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 9.25e1
  variant carriers: 718
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 6.25e1
  variant carriers: 2217
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 2.75e1
  variant carriers: 3201
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 2.5e0
  variant carriers: 1662
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 8.75e1
  variant carriers: 853
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 5.25e1
  variant carriers: 2533
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 2.25e1
  variant carriers: 2595
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 9.75e1
  variant carriers: 6640
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 3271
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.5e0
  variant carriers: 1298
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 3.75e1
  variant carriers: 2879
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.25e1
  variant carriers: 957
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 8.25e1
  variant carriers: 1191
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 1.75e1
  variant carriers: 1617
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 6.75e1
  variant carriers: 1983
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 7.75e1
  variant carriers: 1429
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 5.25e1
  variant carriers: 768
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 2.25e1
  variant carriers: 540
genotype quality: GenotypeQuality
  all individuals: 31481
  bin: 9.75e1
  variant carriers: 30982
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 1.25e1
  variant carriers: 757
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 7.5e0
  variant carriers: 1041
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 6.75e1
  variant carriers: 1080
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 3.25e1
  variant carriers: 437
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 2.5e0
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 9.25e1
  variant carriers: 1101
hgvs: p.Val118Ala
num of homozygotes: 30447
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

16-69988383-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988383
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988383
    reference: chr 16
allele count: 1
allele frequency: 9.233269315999409e-6
allele num: 108304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.363C>G
  hgvsp: ENST00000393701.2:c.363C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.363C>G
  hgvsp: ENST00000449317.2:c.363C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.363C>G
  hgvsp: ENST00000568461.1:c.363C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2354C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.363C>G
  hgvsp: ENST00000288040.6:c.363C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.453C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.556C>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val121Val
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

16-69988383-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988383
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988383
    reference: chr 16
allele count: 27
allele frequency: 2.49298271531984e-4
allele num: 108304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.363C>T
  hgvsp: ENST00000449317.2:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.556C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.453C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.363C>T
  hgvsp: ENST00000568461.1:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2354C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.363C>T
  hgvsp: ENST00000288040.6:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.363C>T
  hgvsp: ENST00000393701.2:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21252
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11167
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10704
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5323
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33897
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6040
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Val121Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

16-69988384-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988384
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988384
    reference: chr 16
allele count: 3
allele frequency: 2.768498182019527e-5
allele num: 108362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.364G>A
  hgvsp: ENSP00000413990.2:p.Glu122Lys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.364G>A
  hgvsp: ENSP00000454685.1:p.Glu122Lys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2355G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.364G>A
  hgvsp: ENSP00000288040.6:p.Glu122Lys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.364G>A
  hgvsp: ENSP00000377304.2:p.Glu122Lys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.557G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.454G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10705
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu122Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

16-69988388-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988388
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988388
    reference: chr 16
allele count: 1
allele frequency: 9.217949190664061e-6
allele num: 108484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.458T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.368T>C
  hgvsp: ENSP00000413990.2:p.Val123Ala
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.561T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.368T>C
  hgvsp: ENSP00000288040.6:p.Val123Ala
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2359T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.368T>C
  hgvsp: ENSP00000377304.2:p.Val123Ala
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.368T>C
  hgvsp: ENSP00000454685.1:p.Val123Ala
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6956
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val123Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

16-69988388-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988388
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988388
    reference: chr 16
allele count: 1
allele frequency: 9.217949190664061e-6
allele num: 108484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.368T>G
  hgvsp: ENSP00000413990.2:p.Val123Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.368T>G
  hgvsp: ENSP00000377304.2:p.Val123Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.368T>G
  hgvsp: ENSP00000454685.1:p.Val123Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.561T>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2359T>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.368T>G
  hgvsp: ENSP00000288040.6:p.Val123Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.458T>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val123Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-69988397-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988397
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988397
    reference: chr 16
allele count: 1
allele frequency: 9.229349330872173e-6
allele num: 108350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2368T>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.377T>A
  hgvsp: ENSP00000288040.6:p.Leu126Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.377T>A
  hgvsp: ENSP00000377304.2:p.Leu126Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.467T>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.377T>A
  hgvsp: ENSP00000413990.2:p.Leu126Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.377T>A
  hgvsp: ENSP00000454685.1:p.Leu126Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.570T>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1649
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu126Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

16-69988401-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988401
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988401
    reference: chr 16
allele count: 3
allele frequency: 2.775310834813499e-5
allele num: 108096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.381G>T
  hgvsp: ENSP00000413990.2:p.Trp127Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2372G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.381G>T
  hgvsp: ENSP00000288040.6:p.Trp127Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.471G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.574G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.381G>T
  hgvsp: ENSP00000377304.2:p.Trp127Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.381G>T
  hgvsp: ENSP00000454685.1:p.Trp127Cys
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8289
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6509
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Trp127Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-69988402-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988402
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988402
    reference: chr 16
allele count: 1
allele frequency: 9.249324799289653e-6
allele num: 108116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.472T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2373T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.575T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.382T>C
  hgvsp: ENSP00000377304.2:p.Phe128Leu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.382T>C
  hgvsp: ENSP00000454685.1:p.Phe128Leu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.382T>C
  hgvsp: ENSP00000413990.2:p.Phe128Leu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.382T>C
  hgvsp: ENSP00000288040.6:p.Phe128Leu
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe128Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-69988409-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988409
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988408
    reference: chr 16
allele count: 1
allele frequency: 9.341080202514618e-6
allele num: 107054
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.393delG
  hgvsp: ENSP00000288040.6:p.Gln132SerfsTer44
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.393delG
  hgvsp: ENSP00000377304.2:p.Gln132SerfsTer44
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2384delG
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.393delG
  hgvsp: ENSP00000413990.2:p.Gln132SerfsTer44
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.393delG
  hgvsp: ENSP00000454685.1:p.Gln132SerfsTer44
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.483delG
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.586delG
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5266
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln132SerfsTer44
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: AG
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-69988414-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988414
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988414
    reference: chr 16
allele count: 1
allele frequency: 9.433784268221354e-6
allele num: 106002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.394C>G
  hgvsp: ENSP00000413990.2:p.Gln132Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.484C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.394C>G
  hgvsp: ENSP00000288040.6:p.Gln132Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.587C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.394C>G
  hgvsp: ENSP00000377304.2:p.Gln132Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.394C>G
  hgvsp: ENSP00000454685.1:p.Gln132Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2385C>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12007
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln132Glu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

16-69988417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988417
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988417
    reference: chr 16
allele count: 1
allele frequency: 9.455191845842552e-6
allele num: 105762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.397C>T
  hgvsp: ENSP00000413990.2:p.Arg133Trp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.397C>T
  hgvsp: ENSP00000288040.6:p.Arg133Trp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2388C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.487C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.590C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.397C>T
  hgvsp: ENSP00000454685.1:p.Arg133Trp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.397C>T
  hgvsp: ENSP00000377304.2:p.Arg133Trp
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5251
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23460
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg133Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

16-69988418-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988418
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988418
    reference: chr 16
allele count: 9
allele frequency: 8.517242684634895e-5
allele num: 105668
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.398G>A
  hgvsp: ENSP00000288040.6:p.Arg133Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2389G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.398G>A
  hgvsp: ENSP00000377304.2:p.Arg133Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.591G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.398G>A
  hgvsp: ENSP00000454685.1:p.Arg133Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.398G>A
  hgvsp: ENSP00000413990.2:p.Arg133Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.488G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14124
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg133Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

16-69988419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988419
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988419
    reference: chr 16
allele count: 1
allele frequency: 9.521089212605923e-6
allele num: 105030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.399G>A
  hgvsp: ENST00000449317.2:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.592G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2390G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.399G>A
  hgvsp: ENST00000568461.1:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.489G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.399G>A
  hgvsp: ENST00000288040.6:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.399G>A
  hgvsp: ENST00000393701.2:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8001
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5241
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3871
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg133Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

16-69988428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988428
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988428
    reference: chr 16
allele count: 17
allele frequency: 1.668073081225347e-4
allele num: 101914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.601C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.408C>T
  hgvsp: ENST00000568461.1:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2399C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.408C>T
  hgvsp: ENST00000288040.6:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.498C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.408C>T
  hgvsp: ENST00000393701.2:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.408C>T
  hgvsp: ENST00000449317.2:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10321
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9463
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12741
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3055
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 2.75e1
  variant carriers: 0
hgvs: p.His136His
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD

16-69988429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988429
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988429
    reference: chr 16
allele count: 193
allele frequency: 1.89583701695448e-3
allele num: 101802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.409G>A
  hgvsp: ENSP00000413990.2:p.Ala137Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.409G>A
  hgvsp: ENSP00000288040.6:p.Ala137Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.602G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.409G>A
  hgvsp: ENSP00000454685.1:p.Ala137Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.499G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.409G>A
  hgvsp: ENSP00000377304.2:p.Ala137Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2400G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 1.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12796
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7949
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9826
  bin: 2.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5372
  bin: 9.75e1
  variant carriers: 177
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Ala137Thr
num of homozygotes: 2
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

16-69988430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988430
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988430
    reference: chr 16
allele count: 19
allele frequency: 1.86706497386109e-4
allele num: 101764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.410C>T
  hgvsp: ENSP00000377304.2:p.Ala137Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.410C>T
  hgvsp: ENSP00000454685.1:p.Ala137Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.410C>T
  hgvsp: ENSP00000413990.2:p.Ala137Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.500C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2401C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.410C>T
  hgvsp: ENSP00000288040.6:p.Ala137Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.603C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12883
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10046
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3789
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala137Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

16-69988431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988431
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988431
    reference: chr 16
allele count: 4
allele frequency: 3.930431364842292e-5
allele num: 101770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.411G>A
  hgvsp: ENST00000449317.2:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.501G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.411G>A
  hgvsp: ENST00000288040.6:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2402G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.411G>A
  hgvsp: ENST00000393701.2:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.411G>A
  hgvsp: ENST00000568461.1:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.604G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8018
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15604
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4759
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3799
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala137Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

16-69988432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988432
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988432
    reference: chr 16
allele count: 1
allele frequency: 9.847947687701884e-6
allele num: 101544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.502G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.412G>A
  hgvsp: ENSP00000377304.2:p.Ala138Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.412G>A
  hgvsp: ENSP00000413990.2:p.Ala138Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2403G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.412G>A
  hgvsp: ENSP00000288040.6:p.Ala138Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.605G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.412G>A
  hgvsp: ENSP00000454685.1:p.Ala138Thr
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7620
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4806
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala138Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-69988434-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988434
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988434
    reference: chr 16
allele count: 1
allele frequency: 9.780142398873327e-6
allele num: 102248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.607A>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.414A>G
  hgvsp: ENST00000393701.2:c.414A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.414A>G
  hgvsp: ENST00000568461.1:c.414A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.504A>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.414A>G
  hgvsp: ENST00000449317.2:c.414A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.414A>G
  hgvsp: ENST00000288040.6:c.414A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2405A>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11216
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14431
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4773
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala138Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

16-69988436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988436
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988436
    reference: chr 16
allele count: 1
allele frequency: 9.776509004164793e-6
allele num: 102286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2407G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.416G>A
  hgvsp: ENSP00000454685.1:p.Gly139Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.416G>A
  hgvsp: ENSP00000413990.2:p.Gly139Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.506G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.609G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.416G>A
  hgvsp: ENSP00000377304.2:p.Gly139Glu
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.416G>A
  hgvsp: ENSP00000288040.6:p.Gly139Glu
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4821
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly139Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-69988436-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988436
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988436
    reference: chr 16
allele count: 2
allele frequency: 1.955301800832959e-5
allele num: 102286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2407G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.506G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.416G>T
  hgvsp: ENSP00000377304.2:p.Gly139Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.416G>T
  hgvsp: ENSP00000413990.2:p.Gly139Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.609G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.416G>T
  hgvsp: ENSP00000288040.6:p.Gly139Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.416G>T
  hgvsp: ENSP00000454685.1:p.Gly139Val
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4821
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14531
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly139Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-69988440-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988440
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988440
    reference: chr 16
allele count: 1
allele frequency: 9.793551925412309e-6
allele num: 102108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.613G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.420G>C
  hgvsp: ENSP00000454685.1:p.Glu140Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2411G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.420G>C
  hgvsp: ENSP00000377304.2:p.Glu140Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.420G>C
  hgvsp: ENSP00000288040.6:p.Glu140Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.420G>C
  hgvsp: ENSP00000413990.2:p.Glu140Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.510G>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14579
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu140Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum

16-69988444-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988444
    reference: chr 16
allele count: 1
allele frequency: 9.989411224102451e-6
allele num: 100106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2415G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.424G>A
  hgvsp: ENSP00000377304.2:p.Ala142Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.424G>A
  hgvsp: ENSP00000454685.1:p.Ala142Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.514G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.424G>A
  hgvsp: ENSP00000413990.2:p.Ala142Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.617G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.424G>A
  hgvsp: ENSP00000288040.6:p.Ala142Thr
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6057
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9872
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala142Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

16-69988447-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988447
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988447
    reference: chr 16
allele count: 4
allele frequency: 4.056219198085464e-5
allele num: 98614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.427C>T
  hgvsp: ENSP00000377304.2:p.Arg143Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.427C>T
  hgvsp: ENSP00000288040.6:p.Arg143Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.517C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2418C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.427C>T
  hgvsp: ENSP00000413990.2:p.Arg143Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.620C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.427C>T
  hgvsp: ENSP00000454685.1:p.Arg143Cys
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6064
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg143Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

16-69988448-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988448
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988448
    reference: chr 16
allele count: 2
allele frequency: 2.02249008979856e-5
allele num: 98888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.428G>A
  hgvsp: ENSP00000454685.1:p.Arg143His
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.518G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.428G>A
  hgvsp: ENSP00000288040.6:p.Arg143His
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.621G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.428G>A
  hgvsp: ENSP00000377304.2:p.Arg143His
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2419G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.428G>A
  hgvsp: ENSP00000413990.2:p.Arg143His
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11437
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4794
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6041
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12823
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg143His
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

16-69988452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988452
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988452
    reference: chr 16
allele count: 3
allele frequency: 3.056234718826406e-5
allele num: 98160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2423C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.432C>T
  hgvsp: ENST00000449317.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.432C>T
  hgvsp: ENST00000288040.6:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.432C>T
  hgvsp: ENST00000568461.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.625C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.432C>T
  hgvsp: ENST00000393701.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.522C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11246
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5218
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6062
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9496
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn144Asn
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-69988453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988453
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988453
    reference: chr 16
allele count: 3
allele frequency: 3.060037944470511e-5
allele num: 98038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.626G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.433G>A
  hgvsp: ENSP00000413990.2:p.Ala145Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.523G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.433G>A
  hgvsp: ENSP00000454685.1:p.Ala145Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.433G>A
  hgvsp: ENSP00000288040.6:p.Ala145Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.433G>A
  hgvsp: ENSP00000377304.2:p.Ala145Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2424G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11170
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4726
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9901
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5220
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4432
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala145Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/16-69988456-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988456
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988456
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 98022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.526A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.436A>C
  hgvsp: ENSP00000288040.6:p.Thr146Pro
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.436A>C
  hgvsp: ENSP00000454685.1:p.Thr146Pro
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2427A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.436A>C
  hgvsp: ENSP00000413990.2:p.Thr146Pro
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.629A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.436A>C
  hgvsp: ENSP00000377304.2:p.Thr146Pro
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9552
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5218
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr146Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

16-69988459-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988459
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988459
    reference: chr 16
allele count: 25
allele frequency: 2.536834841904453e-4
allele num: 98548
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2430T>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.529T>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.632T>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.439T>G
  hgvsp: ENSP00000288040.6:p.Cys147Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.439T>G
  hgvsp: ENSP00000377304.2:p.Cys147Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.439T>G
  hgvsp: ENSP00000454685.1:p.Cys147Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.439T>G
  hgvsp: ENSP00000413990.2:p.Cys147Gly
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13393
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10192
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9618
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12838
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5891
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys147Gly
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-69988461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988461
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988461
    reference: chr 16
allele count: 1
allele frequency: 1.011265497643751e-5
allele num: 98886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2432C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.441C>T
  hgvsp: ENST00000449317.2:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.441C>T
  hgvsp: ENST00000568461.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.441C>T
  hgvsp: ENST00000288040.6:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.441C>T
  hgvsp: ENST00000393701.2:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.634C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.531C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5827
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4364
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys147Cys
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-69988463-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988463
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988463
    reference: chr 16
allele count: 1546
allele frequency: 1.767341899492432e-2
allele num: 87476
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.443C>G
  hgvsp: ENSP00000288040.6:p.Thr148Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.443C>G
  hgvsp: ENSP00000377304.2:p.Thr148Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.636C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.443C>G
  hgvsp: ENSP00000413990.2:p.Thr148Ser
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2434C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.533C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.443C>G
  hgvsp: ENSP00000454685.1:p.Thr148Ser
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 12955
  bin: 1.25e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 8249
  bin: 7.5e0
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 1.75e1
  variant carriers: 275
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 3.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 312
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 2.75e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 2.25e1
  variant carriers: 252
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 4.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 11237
  bin: 2.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 4.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 5747
  bin: 2.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 5.25e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 11129
  bin: 6.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 3878
  bin: 2.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 6.75e1
  variant carriers: 76
hgvs: p.Thr148Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

16-69988464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988464
    reference: chr 16
allele count: 1
allele frequency: 9.816047274083672e-6
allele num: 101874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.444C>T
  hgvsp: ENST00000568461.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.444C>T
  hgvsp: ENST00000288040.6:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.444C>T
  hgvsp: ENST00000449317.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2435C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.444C>T
  hgvsp: ENST00000393701.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.637C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.534C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10097
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6369
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3912
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr148Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

16-69988465-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988465
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988465
    reference: chr 16
allele count: 4
allele frequency: 3.922337713277113e-5
allele num: 101980
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.445C>G
  hgvsp: ENSP00000288040.6:p.His149Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.535C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.445C>G
  hgvsp: ENSP00000413990.2:p.His149Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.445C>G
  hgvsp: ENSP00000454685.1:p.His149Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.445C>G
  hgvsp: ENSP00000377304.2:p.His149Asp
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.638C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2436C>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12455
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3863
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5565
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11928
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His149Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-69988467-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988467
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988467
    reference: chr 16
allele count: 2
allele frequency: 1.95388823759281e-5
allele num: 102360
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.447C>A
  hgvsp: ENSP00000288040.6:p.His149Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.640C>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.537C>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.447C>A
  hgvsp: ENSP00000454685.1:p.His149Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.447C>A
  hgvsp: ENSP00000377304.2:p.His149Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.447C>A
  hgvsp: ENSP00000413990.2:p.His149Gln
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2438C>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12640
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11929
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His149Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

16-69988469-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988469
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988469
    reference: chr 16
allele count: 1
allele frequency: 9.741841207988309e-6
allele num: 102650
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.449A>G
  hgvsp: ENSP00000288040.6:p.Tyr150Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.539A>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.449A>G
  hgvsp: ENSP00000413990.2:p.Tyr150Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.642A>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2440A>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.449A>G
  hgvsp: ENSP00000454685.1:p.Tyr150Cys
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.449A>G
  hgvsp: ENSP00000377304.2:p.Tyr150Cys
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5566
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11895
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr150Cys
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

16-69988470-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988470
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988470
    reference: chr 16
allele count: 1
allele frequency: 9.738425880840621e-6
allele num: 102686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2441C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.540C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.450C>T
  hgvsp: ENST00000568461.1:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.450C>T
  hgvsp: ENST00000288040.6:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.450C>T
  hgvsp: ENST00000393701.2:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.643C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.450C>T
  hgvsp: ENST00000449317.2:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4898
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3693
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr150Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-69988472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988472
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988472
    reference: chr 16
allele count: 27212
allele frequency: 2.689783330697454e-1
allele num: 101168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.542C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.645C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2443C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.452C>T
  hgvsp: ENSP00000377304.2:p.Thr151Met
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.452C>T
  hgvsp: ENSP00000454685.1:p.Thr151Met
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.452C>T
  hgvsp: ENSP00000413990.2:p.Thr151Met
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.452C>T
  hgvsp: ENSP00000288040.6:p.Thr151Met
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.5e0
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 1.75e1
  variant carriers: 5658
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 493
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 3.75e1
  variant carriers: 1025
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 350
genotype depth: GenotypeDepth
  all individuals: 10671
  bin: 1.25e1
  variant carriers: 4182
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 297
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 688
genotype depth: GenotypeDepth
  all individuals: 13917
  bin: 2.25e1
  variant carriers: 4725
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 436
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 7.5e0
  variant carriers: 1478
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 246
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 2.75e1
  variant carriers: 2994
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.25e1
  variant carriers: 1710
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 750
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 4.75e1
  variant carriers: 579
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 1.25e1
  variant carriers: 314
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 6.75e1
  variant carriers: 538
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 1.75e1
  variant carriers: 345
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 3.25e1
  variant carriers: 486
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 7.75e1
  variant carriers: 491
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 7.5e0
  variant carriers: 252
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 2.75e1
  variant carriers: 329
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 5.75e1
  variant carriers: 441
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 7.25e1
  variant carriers: 437
hgvs: p.Thr151Met
num of homozygotes: 3257
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

16-69988473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988473
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988473
    reference: chr 16
allele count: 1556
allele frequency: 1.6582828885668e-2
allele num: 93832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.646G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.453G>A
  hgvsp: ENST00000449317.2:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.543G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.453G>A
  hgvsp: ENST00000288040.6:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2444G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.453G>A
  hgvsp: ENST00000568461.1:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.453G>A
  hgvsp: ENST00000393701.2:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 3.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 10827
  bin: 1.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 3.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 14302
  bin: 2.25e1
  variant carriers: 248
genotype depth: GenotypeDepth
  all individuals: 8790
  bin: 2.75e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 1.75e1
  variant carriers: 241
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 313
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 7.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 2639
  bin: 3.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 5.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 8.25e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 14894
  bin: 6.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 7.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 9.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 7.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 5.25e1
  variant carriers: 84
hgvs: p.Thr151Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-69988481-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988481
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988481
    reference: chr 16
allele count: 2
allele frequency: 1.895950250265433e-5
allele num: 105488
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2452G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+5G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+5G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+5G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+5G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+5G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+5G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4107
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 3.75e1
  variant carriers: 0
hgvs: c.456+5G>A
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

16-69988485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988485
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988485
    reference: chr 16
allele count: 1
allele frequency: 9.472029098073389e-6
allele num: 105574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2456G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+9G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+9G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+9G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+9G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+9G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+9G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18785
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10634
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2455
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

16-69988491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988491
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988491
    reference: chr 16
allele count: 1
allele frequency: 9.443048971651967e-6
allele num: 105898
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+15G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+15G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2462G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+15G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+15G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+15G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+15G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

16-69988496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988496
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988496
    reference: chr 16
allele count: 1
allele frequency: 9.439483471464441e-6
allele num: 105938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2467G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+20G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+20G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+20G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+20G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+20G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+20G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3066
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4106
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22908
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

16-69988499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988499
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988499
    reference: chr 16
allele count: 3
allele frequency: 2.836986741815293e-5
allele num: 105746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+23C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+23C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+23C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+23C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+23C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2470C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+23C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4468
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3468
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-69988502-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988502
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988502
    reference: chr 16
allele count: 1490
allele frequency: 1.589774230719986e-2
allele num: 93724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+26T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+26T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+26T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2473T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+26T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+26T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+26T>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 1.75e1
  variant carriers: 339
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 12543
  bin: 1.25e1
  variant carriers: 261
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 2.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 2.5e0
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 3.25e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 7.5e0
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 13173
  bin: 2.25e1
  variant carriers: 298
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 4120
  bin: 3.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 3.75e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 10181
  bin: 2.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 4.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 2.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 16948
  bin: 6.25e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 5.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 4.25e1
  variant carriers: 97
num of homozygotes: 14
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

16-69988505-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988505
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988505
    reference: chr 16
allele count: 4
allele frequency: 3.835973761939469e-5
allele num: 104276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2476G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+29G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5869
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-69988511-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988511
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988511
    reference: chr 16
allele count: 6
allele frequency: 5.788265256902506e-5
allele num: 103658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2482T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+35T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+35T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+35T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+35T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+35T>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+35T>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8169
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15668
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13612
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3889
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

16-69988520-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988520
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988520
    reference: chr 16
allele count: 6
allele frequency: 5.897037721384625e-5
allele num: 101746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+44C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+44C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+44C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+44C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2491C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+44C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+44C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13561
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6066
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4739
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

16-69988524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69988524
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69988524
    reference: chr 16
allele count: 21
allele frequency: 2.083994919021912e-4
allele num: 100768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.456+48C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.649+48C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.456+48C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.456+48C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.456+48C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.546+48C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.12+2495C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15024
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13453
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7328
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4729
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3892
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-69992816-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992816
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992816
    reference: chr 16
allele count: 15
allele frequency: 2.777777777777778e-1
allele num: 54
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.457-29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.547-29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.457-29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.457-29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.13-29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.457-29G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.650-29G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 6
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

16-69992829-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992829
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992827
    reference: chr 16
allele count: 32
allele frequency: 3.076923076923077e-1
allele num: 104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.650-15_650-14delCT
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.457-15_457-14delCT
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.457-15_457-14delCT
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.13-15_13-14delCT
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.457-15_457-14delCT
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.457-15_457-14delCT
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.547-15_547-14delCT
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 2.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 11
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: CCT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

16-69992905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992905
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992905
    reference: chr 16
allele count: 13
allele frequency: 1.805555555555556e-1
allele num: 72
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.517G>A
  hgvsp: ENSP00000413990.2:p.Ala173Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.517G>A
  hgvsp: ENSP00000454685.1:p.Ala173Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.73G>A
  hgvsp: ENSP00000454976.1:p.Ala25Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.517G>A
  hgvsp: ENSP00000377304.2:p.Ala173Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.607G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.517G>A
  hgvsp: ENSP00000288040.6:p.Ala173Thr
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.710G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 2.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 7.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 4
hgvs: p.Ala173Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

16-69992909-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992909
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992909
    reference: chr 16
allele count: 41
allele frequency: 4.019607843137255e-1
allele num: 102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.77C>T
  hgvsp: ENSP00000454976.1:p.Ala26Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.611C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.521C>T
  hgvsp: ENSP00000288040.6:p.Ala174Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.714C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.521C>T
  hgvsp: ENSP00000454685.1:p.Ala174Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.521C>T
  hgvsp: ENSP00000413990.2:p.Ala174Val
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.521C>T
  hgvsp: ENSP00000377304.2:p.Ala174Val
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.5e0
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 13
hgvs: p.Ala174Val
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

16-69992941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992941
    reference: chr 16
allele count: 20
allele frequency: 4.761904761904762e-1
allele num: 42
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.553A>G
  hgvsp: ENSP00000288040.6:p.Arg185Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.643A>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.553A>G
  hgvsp: ENSP00000454685.1:p.Arg185Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.553A>G
  hgvsp: ENSP00000413990.2:p.Arg185Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.553A>G
  hgvsp: ENSP00000377304.2:p.Arg185Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.109A>G
  hgvsp: ENSP00000454976.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.746A>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.5e0
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 8
hgvs: p.Arg185Gly
num of homozygotes: 1
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

16-69992952-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992952
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992952
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 20
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.554+10G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.554+10G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.747+10G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.554+10G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.554+10G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.110+10G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.644+10G>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

16-69992960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69992960
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69992960
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 14
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.554+18C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.554+18C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454976
  ensembl transcript: ENST00000561889
  gene symbol: CLEC18A
  hgvsc: ENST00000561889.1:c.110+18C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.554+18C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.554+18C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000565705
  gene symbol: CLEC18A
  hgvsc: ENST00000565705.1:n.644+18C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.747+18C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-69996596-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996596
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996596
    reference: chr 16
allele count: 184
allele frequency: 7.36e-1
allele num: 250
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-283G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-283G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-283G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-283G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1212-47G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 2.5e0
  variant carriers: 1474
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 7.5e0
  variant carriers: 879
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 7.5e0
  variant carriers: 967
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 1.25e1
  variant carriers: 498
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.25e1
  variant carriers: 175
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 2.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 1.75e1
  variant carriers: 394
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 26
num of homozygotes: 73
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

16-69996624-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996624
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996624
    reference: chr 16
allele count: 23
allele frequency: 8.778625954198473e-2
allele num: 262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-255G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1212-19G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-255G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-255G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-255G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 7.5e0
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13557
  bin: 2.5e0
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11578
  bin: 7.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 3
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

16-69996625-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996625
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996626
    reference: chr 16
allele count: 2
allele frequency: 6.060606060606061e-3
allele num: 330
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-250dupC
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1212-14dupC
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-250dupC
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-250dupC
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-250dupC
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11668
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

16-69996642-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996642
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996642
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 466
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-237G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1212-1G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-237G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-237G>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-237G>T
  variant of: http://identifiers.org/hgnc/30388
canonical: false
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1602
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13661
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1212-1G>T
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

16-69996682-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996682
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996682
    reference: chr 16
allele count: 7
allele frequency: 1.0e-2
allele num: 700
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-197G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1238+13G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-197G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-197G>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-197G>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19403
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-69996686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996686
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996686
    reference: chr 16
allele count: 1
allele frequency: 1.362397820163488e-3
allele num: 734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-193C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1238+17C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-193C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-193C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-193C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19861
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
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genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17879
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

16-69996829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996829
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996829
    reference: chr 16
allele count: 5
allele frequency: 5.034638311583696e-5
allele num: 99312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1239-50C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-50C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-50C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-50C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-50C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10163
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16475
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5457
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-69996830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996830
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996830
    reference: chr 16
allele count: 3
allele frequency: 3.014106016155608e-5
allele num: 99532
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-49G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-49G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1239-49G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-49G>A
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-49G>A
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5554
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

16-69996835-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996835
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996835
    reference: chr 16
allele count: 1
allele frequency: 1.004944326084335e-5
allele num: 99508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-44C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-44C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-44C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1239-44C>G
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-44C>G
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5443
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5922
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/16-69996838-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996838
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996838
    reference: chr 16
allele count: 2
allele frequency: 2.011222622232055e-5
allele num: 99442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-41A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-41A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1239-41A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-41A>C
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-41A>C
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10895
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6032
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5414
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2383
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

16-69996851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69996851
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 69996851
    reference: chr 16
allele count: 2
allele frequency: 2.024660363224069e-5
allele num: 98782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000377304
  ensembl transcript: ENST00000393701
  gene symbol: CLEC18A
  hgvsc: ENST00000393701.2:c.1212-28C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000288040
  ensembl transcript: ENST00000288040
  gene symbol: CLEC18A
  hgvsc: ENST00000288040.6:c.1212-28C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000413990
  ensembl transcript: ENST00000449317
  gene symbol: CLEC18A
  hgvsc: ENST00000449317.2:c.1239-28C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl transcript: ENST00000568102
  gene symbol: CLEC18A
  hgvsc: ENST00000568102.1:n.2690-28C>T
  variant of: http://identifiers.org/hgnc/30388
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000157322
  ensembl protein: ENSP00000454685
  ensembl transcript: ENST00000568461
  gene symbol: CLEC18A
  hgvsc: ENST00000568461.1:c.1212-28C>T
  variant of: http://identifiers.org/hgnc/30388
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8886
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2489
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4984
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5424
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: East Asian
population: Other
reference allele: C

GenotypeQuality
all individuals: 510
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.782022952455628e-5
allele num: 56116
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.091e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.746e0

QD
type: SiteQuality
SIO_000300: 1.335e1

FS
type: SiteQuality
SIO_000300: 1.1633e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

MQ
type: SiteQuality
SIO_000300: 4.192e1

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

DP
type: SiteQuality
SIO_000300: 1.801681e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

GenotypeQuality
all individuals: 511
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1284
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2408
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10758
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21629
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.055e0

MQ
type: SiteQuality
SIO_000300: 4.122e1

VQSLOD
type: SiteQuality
SIO_000300: -1.858e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

QD
type: SiteQuality
SIO_000300: 2.818e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

DP
type: SiteQuality
SIO_000300: 1.801188e6

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 237
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10758
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.038e0

DP
type: SiteQuality
SIO_000300: 1.80083e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

QD
type: SiteQuality
SIO_000300: 2.832e1

MQ
type: SiteQuality
SIO_000300: 4.081e1

GenotypeQuality
all individuals: 2410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2542
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10760
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 375
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.825112988799372e-5
allele num: 10178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 7.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.644e0

VQSLOD
type: SiteQuality
SIO_000300: -2.457e0

QD
type: SiteQuality
SIO_000300: 1.162e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 1.800089e6

MQ
type: SiteQuality
SIO_000300: 4.178e1

GenotypeQuality
all individuals: 149
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10766
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56124
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.738544474393531e-4
allele num: 10388
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.53e-1

DP
type: SiteQuality
SIO_000300: 1.800717e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: -2.132e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.175e0

QD
type: SiteQuality
SIO_000300: 1.575e1

MQ
type: SiteQuality
SIO_000300: 4.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

GenotypeQuality
all individuals: 631
bin: 4.25e1
variant carriers: 403

GenotypeQuality
all individuals: 786
bin: 3.75e1
variant carriers: 522

GenotypeQuality
all individuals: 887
bin: 1.75e1
variant carriers: 703

GenotypeQuality
all individuals: 6954
bin: 6.25e1
variant carriers: 898

GenotypeQuality
all individuals: 866
bin: 5.75e1
variant carriers: 567

GenotypeQuality
all individuals: 757
bin: 8.75e1
variant carriers: 665

GenotypeQuality
all individuals: 1476
bin: 7.75e1
variant carriers: 1092

GenotypeQuality
all individuals: 968
bin: 7.25e1
variant carriers: 619

GenotypeQuality
all individuals: 888
bin: 4.75e1
variant carriers: 599

GenotypeQuality
all individuals: 591
bin: 2.75e1
variant carriers: 374

GenotypeQuality
all individuals: 1400
bin: 8.25e1
variant carriers: 1180

East Asian
type: Population
allele count: 8279
allele frequency: 9.680776426566885e-1
allele num: 8552
num of homozygotes: 4029

European (Finnish)
type: Population
allele count: 2983
allele frequency: 6.204242928452579e-1
allele num: 4808
num of homozygotes: 1255

European (Non-Finnish)
type: Population
allele count: 31773
allele frequency: 5.868457020427764e-1
allele num: 54142
num of homozygotes: 12885

African
type: Population
allele count: 9328
allele frequency: 9.20102584336161e-1
allele num: 10138
num of homozygotes: 4347

Other
type: Population
allele count: 525
allele frequency: 6.782945736434108e-1
allele num: 774
num of homozygotes: 219

South Asian
type: Population
allele count: 11253
allele frequency: 7.26187403200826e-1
allele num: 15496
num of homozygotes: 4615

Latino
type: Population
allele count: 7305
allele frequency: 7.261431411530815e-1
allele num: 10060
num of homozygotes: 3097

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.131e-1

FS
type: SiteQuality
SIO_000300: 1.773e0

MQ
type: SiteQuality
SIO_000300: 4.091e1

QD
type: SiteQuality
SIO_000300: 2.278e1

DP
type: SiteQuality
SIO_000300: 3.259041e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.042e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 8.968000000000001e1

GenotypeQuality
all individuals: 33897
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6040
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
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variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6987
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.294058408862034e-5
allele num: 15888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.4673e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.164e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

DP
type: SiteQuality
SIO_000300: 1.791302e6

MQRankSum
type: SiteQuality
SIO_000300: -9.31e-1

QD
type: SiteQuality
SIO_000300: 4.72e0

MQ
type: SiteQuality
SIO_000300: 3.85e1

VQSLOD
type: SiteQuality
SIO_000300: -1.205e1

GenotypeQuality
all individuals: 1019
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
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variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6987
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 861
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1843
bin: 7.75e1
variant carriers: 3

East Asian
type: Population
allele count: 1
allele frequency: 1.168224299065421e-4
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.517623363544814e-4
allele num: 15888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.85951370127364e-4
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.956830277942046e-4
allele num: 57494
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.259445843828715e-3
allele num: 794
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: -1.205e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.164e0

MQ
type: SiteQuality
SIO_000300: 3.85e1

QD
type: SiteQuality
SIO_000300: 4.72e0

FS
type: SiteQuality
SIO_000300: 4.4673e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.791302e6

GenotypeQuality
all individuals: 695
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 572
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5304
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33746
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.737136504186499e-5
allele num: 57566
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.926782273603083e-4
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5086
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.09e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

QD
type: SiteQuality
SIO_000300: 9.25e0

FS
type: SiteQuality
SIO_000300: 1.786e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.774e0

DP
type: SiteQuality
SIO_000300: 1.788707e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.147e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
all individuals: 734
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 568
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5300
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.733522865166592e-5
allele num: 57686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.468e0

FS
type: SiteQuality
SIO_000300: 9.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.504e0

QD
type: SiteQuality
SIO_000300: 1.742e1

MQ
type: SiteQuality
SIO_000300: 4.096e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.51e-1

DP
type: SiteQuality
SIO_000300: 1.784818e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.28e-1

GenotypeQuality
all individuals: 734
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 33627
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.733522865166592e-5
allele num: 57686
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.468e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.096e1

FS
type: SiteQuality
SIO_000300: 9.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.51e-1

DP
type: SiteQuality
SIO_000300: 1.784818e6

QD
type: SiteQuality
SIO_000300: 1.742e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.732561765826952e-5
allele num: 57718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15834
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

FS
type: SiteQuality
SIO_000300: 1.127e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

QD
type: SiteQuality
SIO_000300: 2.965e1

DP
type: SiteQuality
SIO_000300: 1.763008e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.516e0

MQ
type: SiteQuality
SIO_000300: 3.998e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15790
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 5.204899545438773e-5
allele num: 57638
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.458e1

MQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.734e0

FS
type: SiteQuality
SIO_000300: 1.8923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-2

QD
type: SiteQuality
SIO_000300: 1.369e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.582e0

DP
type: SiteQuality
SIO_000300: 1.743851e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.303e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.734725739860528e-5
allele num: 57646
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.474e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.396e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.743381e6

MQ
type: SiteQuality
SIO_000300: 4.742e1

VQSLOD
type: SiteQuality
SIO_000300: -3.659e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4946
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.747885059078515e-5
allele num: 57212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.680241e6

QD
type: SiteQuality
SIO_000300: 1.187e1

MQ
type: SiteQuality
SIO_000300: 4.909e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.823182711198428e-5
allele num: 10180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

DP
type: SiteQuality
SIO_000300: 1.614015e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 2.133e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.674e0

MQ
type: SiteQuality
SIO_000300: 4.128e1

MQRankSum
type: SiteQuality
SIO_000300: 4.91e0

FS
type: SiteQuality
SIO_000300: 3.2952e1

VQSLOD
type: SiteQuality
SIO_000300: -1.886e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.101e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.764975819831268e-5
allele num: 56658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4836
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.922e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 2.766e1

VQSLOD
type: SiteQuality
SIO_000300: -5.354e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 1.601087e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 8.39806844425782e-4
allele num: 9526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4834
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56628
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.208313194780087e-4
allele num: 8276
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Other
type: Population
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allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15508
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MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

MQ
type: SiteQuality
SIO_000300: 4.0e1

DP
type: SiteQuality
SIO_000300: 1.586889e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
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allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 15460
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African
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 3.242e1

QD
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.648170442523074e-5
allele num: 54822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9924
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.87125748502994e-3
allele num: 8016
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.592e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

MQ
type: SiteQuality
SIO_000300: 3.63e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

FS
type: SiteQuality
SIO_000300: 1.6569e1

DP
type: SiteQuality
SIO_000300: 1.440274e6

QD
type: SiteQuality
SIO_000300: 9.35e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 539
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variant carriers: 2

GenotypeQuality
all individuals: 697
bin: 8.25e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8010
num of homozygotes: 0

African
type: Population
allele count: 184
allele frequency: 2.147525676937442e-2
allele num: 8568
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 9.129752035934705e-5
allele num: 54766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.031445273130417e-4
allele num: 9922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15248
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

FS
type: SiteQuality
SIO_000300: 1.836e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 3.733e1

DP
type: SiteQuality
SIO_000300: 1.434732e6

QD
type: SiteQuality
SIO_000300: 1.153e1

VQSLOD
type: SiteQuality
SIO_000300: -2.131e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.037297677691766e-4
allele num: 8526
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.752814610958219e-4
allele num: 7994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.642875397028221e-4
allele num: 54782
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.559958016268695e-5
allele num: 15244
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

MQ
type: SiteQuality
SIO_000300: 3.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.851e0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-1

DP
type: SiteQuality
SIO_000300: 1.429666e6

QD
type: SiteQuality
SIO_000300: 7.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.252191334835963e-4
allele num: 7986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.470858560070027e-5
allele num: 54836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.083e0

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

QD
type: SiteQuality
SIO_000300: 3.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.466e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.22e-1

DP
type: SiteQuality
SIO_000300: 1.425273e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 3.442e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1656
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variant carriers: 0

GenotypeQuality
all individuals: 5223
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.827618977995468e-5
allele num: 54716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15218
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.267e0

QD
type: SiteQuality
SIO_000300: 3.42e0

VQSLOD
type: SiteQuality
SIO_000300: -4.467e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.358e0

DP
type: SiteQuality
SIO_000300: 1.421259e6

FS
type: SiteQuality
SIO_000300: 9.375e0

MQ
type: SiteQuality
SIO_000300: 3.408e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 398
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5221
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15246
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.249063202598052e-4
allele num: 8006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

FS
type: SiteQuality
SIO_000300: 2.602e0

DP
type: SiteQuality
SIO_000300: 1.421789e6

VQSLOD
type: SiteQuality
SIO_000300: -9.154999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.031e0

QD
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.846e0

MQ
type: SiteQuality
SIO_000300: 2.98e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55302
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.251564455569462e-4
allele num: 7990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4550
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 3.859e1

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.675e0

DP
type: SiteQuality
SIO_000300: 1.420085e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 5.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.616505732161585e-5
allele num: 55302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

MQ
type: SiteQuality
SIO_000300: 3.859e1

DP
type: SiteQuality
SIO_000300: 1.420085e6

QD
type: SiteQuality
SIO_000300: 1.142e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

FS
type: SiteQuality
SIO_000300: 5.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.675e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15234
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Latino
type: Population
allele count: 1
allele frequency: 9.978048293753742e-5
allele num: 10022
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55230
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.14e-1

DP
type: SiteQuality
SIO_000300: 1.402617e6

FS
type: SiteQuality
SIO_000300: 5.315e0

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.321e1

MQ
type: SiteQuality
SIO_000300: 4.058e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.847336141284268e-5
allele num: 54132
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 1.365303e6

FS
type: SiteQuality
SIO_000300: 2.4902e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.196e0

QD
type: SiteQuality
SIO_000300: 6.23e0

MQ
type: SiteQuality
SIO_000300: 3.677e1

GenotypeQuality
all individuals: 12476
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variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1217
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5223
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4447
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 2.041649652919559e-4
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.498750624687656e-4
allele num: 8004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53308
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

FS
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.194e0

DP
type: SiteQuality
SIO_000300: 1.355957e6

QD
type: SiteQuality
SIO_000300: 7.98e0

MQ
type: SiteQuality
SIO_000300: 3.602e1

GenotypeQuality
all individuals: 486
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5221
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.4906600249066e-4
allele num: 8030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

FS
type: SiteQuality
SIO_000300: 2.769e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -3.743e0

QD
type: SiteQuality
SIO_000300: 4.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.049e0

DP
type: SiteQuality
SIO_000300: 1.354956e6

MQ
type: SiteQuality
SIO_000300: 3.299e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.44e-1

GenotypeQuality
all individuals: 1186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 668
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 489
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variant carriers: 0

GenotypeQuality
all individuals: 4452
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.352996888107157e-4
allele num: 14782
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.021450459652707e-4
allele num: 9790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

FS
type: SiteQuality
SIO_000300: 1.036e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.288e0

DP
type: SiteQuality
SIO_000300: 1.340682e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQ
type: SiteQuality
SIO_000300: 3.11e1

QD
type: SiteQuality
SIO_000300: 4.6e-1

GenotypeQuality
all individuals: 491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.775009437523594e-5
allele num: 52980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4128
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.76773145641581e-5
allele num: 14776
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.51e0

FS
type: SiteQuality
SIO_000300: 1.1587e1

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

MQ
type: SiteQuality
SIO_000300: 3.627e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

DP
type: SiteQuality
SIO_000300: 1.338857e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.846e0

GenotypeQuality
all individuals: 10509
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
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GenotypeQuality
all individuals: 6033
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GenotypeQuality
all individuals: 13317
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
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variant carriers: 0

GenotypeQuality
all individuals: 949
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variant carriers: 0

GenotypeQuality
all individuals: 4657
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GenotypeQuality
all individuals: 824
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variant carriers: 0

GenotypeQuality
all individuals: 390
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variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14720
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.003e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 1.336521e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

MQ
type: SiteQuality
SIO_000300: 3.28e1

QD
type: SiteQuality
SIO_000300: 1.146e1

GenotypeQuality
all individuals: 1776
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2298
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5235
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 13947
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variant carriers: 0

GenotypeQuality
all individuals: 4357
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variant carriers: 0

GenotypeQuality
all individuals: 853
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variant carriers: 0

GenotypeQuality
all individuals: 4346
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GenotypeQuality
all individuals: 809
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variant carriers: 0

GenotypeQuality
all individuals: 498
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GenotypeQuality
all individuals: 216
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4150
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.804572672836146e-4
allele num: 14696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.439573637591953e-4
allele num: 53288
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.8328611898017e-3
allele num: 706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7708
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.362e1

DP
type: SiteQuality
SIO_000300: 1.344588e6

VQSLOD
type: SiteQuality
SIO_000300: -3.63e0

FS
type: SiteQuality
SIO_000300: 1.2332e1

QD
type: SiteQuality
SIO_000300: 1.051e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
all individuals: 1038
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5220
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1615
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1066
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GenotypeQuality
all individuals: 769
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variant carriers: 0

GenotypeQuality
all individuals: 991
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variant carriers: 0

GenotypeQuality
all individuals: 4210
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.019575856443719e-4
allele num: 9808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53488
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.945e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.355e1

DP
type: SiteQuality
SIO_000300: 1.350566e6

VQSLOD
type: SiteQuality
SIO_000300: -4.176e0

QD
type: SiteQuality
SIO_000300: 4.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.85e-1

GenotypeQuality
all individuals: 1465
bin: 1.75e1
variant carriers: 21

GenotypeQuality
all individuals: 2221
bin: 7.5e0
variant carriers: 30

GenotypeQuality
all individuals: 4873
bin: 3.25e1
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GenotypeQuality
all individuals: 900
bin: 7.75e1
variant carriers: 87

GenotypeQuality
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bin: 8.25e1
variant carriers: 58

GenotypeQuality
all individuals: 3508
bin: 3.75e1
variant carriers: 58

GenotypeQuality
all individuals: 774
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variant carriers: 57

GenotypeQuality
all individuals: 493
bin: 9.25e1
variant carriers: 68

GenotypeQuality
all individuals: 549
bin: 5.75e1
variant carriers: 68

GenotypeQuality
all individuals: 5056
bin: 9.75e1
variant carriers: 687

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 54

East Asian
type: Population
allele count: 77
allele frequency: 1.114972487691862e-2
allele num: 6906
num of homozygotes: 0

African
type: Population
allele count: 192
allele frequency: 2.636638286185114e-2
allele num: 7282
num of homozygotes: 0

South Asian
type: Population
allele count: 84
allele frequency: 6.08695652173913e-3
allele num: 13800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 96
allele frequency: 2.898550724637681e-2
allele num: 3312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 985
allele frequency: 2.109027064063035e-2
allele num: 46704
num of homozygotes: 0

Latino
type: Population
allele count: 99
allele frequency: 1.11864406779661e-2
allele num: 8850
num of homozygotes: 0

Other
type: Population
allele count: 13
allele frequency: 2.090032154340836e-2
allele num: 622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.4763e1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 3.287e1

DP
type: SiteQuality
SIO_000300: 1.410766e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.46e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.952e0

GenotypeQuality
all individuals: 601
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
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GenotypeQuality
all individuals: 1673
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 960
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GenotypeQuality
all individuals: 11957
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GenotypeQuality
all individuals: 916
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variant carriers: 0

GenotypeQuality
all individuals: 5423
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GenotypeQuality
all individuals: 5562
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GenotypeQuality
all individuals: 2451
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4536
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.288992008249549e-4
allele num: 7758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.459e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 5.703e0

DP
type: SiteQuality
SIO_000300: 1.405089e6

MQ
type: SiteQuality
SIO_000300: 3.362e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

QD
type: SiteQuality
SIO_000300: 3.458e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeQuality
all individuals: 582
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5336
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variant carriers: 0

GenotypeQuality
all individuals: 2393
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GenotypeQuality
all individuals: 881
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variant carriers: 0

GenotypeQuality
all individuals: 1115
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GenotypeQuality
all individuals: 619
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GenotypeQuality
all individuals: 921
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GenotypeQuality
all individuals: 1723
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GenotypeQuality
all individuals: 1621
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variant carriers: 0

GenotypeQuality
all individuals: 440
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variant carriers: 0

GenotypeQuality
all individuals: 13123
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.603993224492738e-5
allele num: 55494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4544
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.98373338623289e-4
allele num: 10082
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.075e1

QD
type: SiteQuality
SIO_000300: 6.69e0

FS
type: SiteQuality
SIO_000300: 2.065e0

VQSLOD
type: SiteQuality
SIO_000300: -4.302e0

DP
type: SiteQuality
SIO_000300: 1.408922e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.613e0

GenotypeQuality
all individuals: 5151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3952
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3706
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5563
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 448
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.556890820761954e-4
allele num: 7822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 3.403e0

DP
type: SiteQuality
SIO_000300: 1.416795e6

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.663e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.376e0

MQ
type: SiteQuality
SIO_000300: 3.72e1

QD
type: SiteQuality
SIO_000300: 5.15e0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5003
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15719
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55876
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.276161306789178e-4
allele num: 7836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14866
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

QD
type: SiteQuality
SIO_000300: 9.41e0

FS
type: SiteQuality
SIO_000300: 5.129e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 1.423258e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.514e0

MQ
type: SiteQuality
SIO_000300: 4.142e1

GenotypeQuality
all individuals: 1153
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11857
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 445
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.788588803434091e-5
allele num: 55910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14852
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.53e-1

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 1.427767e6

MQ
type: SiteQuality
SIO_000300: 3.685e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.305e0

FS
type: SiteQuality
SIO_000300: 6.397e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e0

GenotypeQuality
all individuals: 1009
bin: 5.25e1
variant carriers: 544

GenotypeQuality
all individuals: 2638
bin: 2.5e0
variant carriers: 221

GenotypeQuality
all individuals: 2221
bin: 3.75e1
variant carriers: 551

GenotypeQuality
all individuals: 6848
bin: 2.25e1
variant carriers: 408

GenotypeQuality
all individuals: 1109
bin: 4.25e1
variant carriers: 374

GenotypeQuality
all individuals: 10689
bin: 6.25e1
variant carriers: 561

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 400

GenotypeQuality
all individuals: 20068
bin: 9.75e1
variant carriers: 18159

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 442

GenotypeQuality
all individuals: 764
bin: 9.25e1
variant carriers: 457

GenotypeQuality
all individuals: 1435
bin: 4.75e1
variant carriers: 533

European (Finnish)
type: Population
allele count: 911
allele frequency: 1.980434782608696e-1
allele num: 4600
num of homozygotes: 70

European (Non-Finnish)
type: Population
allele count: 11969
allele frequency: 2.189798382670423e-1
allele num: 54658
num of homozygotes: 1063

Latino
type: Population
allele count: 3641
allele frequency: 3.638089528377298e-1
allele num: 10008
num of homozygotes: 296

Other
type: Population
allele count: 201
allele frequency: 2.6657824933687e-1
allele num: 754
num of homozygotes: 20

African
type: Population
allele count: 1100
allele frequency: 1.278475127847513e-1
allele num: 8604
num of homozygotes: 61

East Asian
type: Population
allele count: 3590
allele frequency: 4.616769547325103e-1
allele num: 7776
num of homozygotes: 750

South Asian
type: Population
allele count: 5800
allele frequency: 3.927410617551463e-1
allele num: 14768
num of homozygotes: 997

DP
type: SiteQuality
SIO_000300: 1.505485e6

VQSLOD
type: SiteQuality
SIO_000300: -2.743e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 4.899e0

MQ
type: SiteQuality
SIO_000300: 3.462e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.51e-1

GenotypeQuality
all individuals: 3064
bin: 6.75e1
variant carriers: 77

GenotypeQuality
all individuals: 3926
bin: 9.75e1
variant carriers: 679

GenotypeQuality
all individuals: 9883
bin: 2.25e1
variant carriers: 34

GenotypeQuality
all individuals: 3113
bin: 2.75e1
variant carriers: 31

GenotypeQuality
all individuals: 1469
bin: 1.75e1
variant carriers: 21

GenotypeQuality
all individuals: 1132
bin: 1.25e1
variant carriers: 18

GenotypeQuality
all individuals: 3907
bin: 2.5e0
variant carriers: 13

GenotypeQuality
all individuals: 483
bin: 8.75e1
variant carriers: 49

GenotypeQuality
all individuals: 3615
bin: 3.25e1
variant carriers: 47

GenotypeQuality
all individuals: 1353
bin: 4.25e1
variant carriers: 44

GenotypeQuality
all individuals: 1943
bin: 4.75e1
variant carriers: 68

European (Non-Finnish)
type: Population
allele count: 991
allele frequency: 1.963309295506776e-2
allele num: 50476
num of homozygotes: 0

East Asian
type: Population
allele count: 75
allele frequency: 1.029088913282108e-2
allele num: 7288
num of homozygotes: 0

South Asian
type: Population
allele count: 85
allele frequency: 5.998588567395907e-3
allele num: 14170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 99
allele frequency: 2.584856396866841e-2
allele num: 3830
num of homozygotes: 0

Latino
type: Population
allele count: 99
allele frequency: 1.046732924508353e-2
allele num: 9458
num of homozygotes: 0

African
type: Population
allele count: 194
allele frequency: 2.447640676255362e-2
allele num: 7926
num of homozygotes: 0

Other
type: Population
allele count: 13
allele frequency: 1.900584795321637e-2
allele num: 684
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.410059e6

MQ
type: SiteQuality
SIO_000300: 3.343e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.22e-1

FS
type: SiteQuality
SIO_000300: 3.2829e1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.51e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.85e0

QD
type: SiteQuality
SIO_000300: 2.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-1

GenotypeQuality
all individuals: 3481
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10535
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variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 1721
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variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21347
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variant carriers: 0

GenotypeQuality
all individuals: 4158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
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variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.738828029907842e-5
allele num: 57510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.38642e6

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.94e-1

MQ
type: SiteQuality
SIO_000300: 3.698e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.54e0

VQSLOD
type: SiteQuality
SIO_000300: -3.017e0

FS
type: SiteQuality
SIO_000300: 1.305e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

QD
type: SiteQuality
SIO_000300: 1.394e1

GenotypeQuality
all individuals: 4192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2737
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 243
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.735628991946682e-5
allele num: 57616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8954
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -4.018e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.396e0

MQ
type: SiteQuality
SIO_000300: 4.233e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.586e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 1.935e0

QD
type: SiteQuality
SIO_000300: 9.48e0

DP
type: SiteQuality
SIO_000300: 1.394288e6

GenotypeQuality
all individuals: 4105
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24072
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10589
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.729385722191477e-5
allele num: 57824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.40098e6

MQ
type: SiteQuality
SIO_000300: 4.311e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.45e0

QD
type: SiteQuality
SIO_000300: 4.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.284e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.57e-1

GenotypeQuality
all individuals: 4198
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11025
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3817
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5018
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.716818914562064e-5
allele num: 14888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.854e1

FS
type: SiteQuality
SIO_000300: 3.499e0

VQSLOD
type: SiteQuality
SIO_000300: -2.362e0

DP
type: SiteQuality
SIO_000300: 1.393871e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

QD
type: SiteQuality
SIO_000300: 3.085e1

GenotypeQuality
all individuals: 11358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2859
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4105
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 642
bin: 9.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.192826975005193e-5
allele num: 57772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14834
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.123e0

VQSLOD
type: SiteQuality
SIO_000300: -2.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.473e0

QD
type: SiteQuality
SIO_000300: 1.116e1

MQ
type: SiteQuality
SIO_000300: 4.211e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

DP
type: SiteQuality
SIO_000300: 1.381035e6

GenotypeQuality
all individuals: 784
bin: 5.75e1
variant carriers: 118

GenotypeQuality
all individuals: 4843
bin: 2.5e0
variant carriers: 37

GenotypeQuality
all individuals: 1548
bin: 7.5e0
variant carriers: 103

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 50

GenotypeQuality
all individuals: 1231
bin: 1.75e1
variant carriers: 88

GenotypeQuality
all individuals: 543
bin: 9.25e1
variant carriers: 44

GenotypeQuality
all individuals: 1160
bin: 7.75e1
variant carriers: 57

GenotypeQuality
all individuals: 433
bin: 8.75e1
variant carriers: 31

GenotypeQuality
all individuals: 2752
bin: 6.75e1
variant carriers: 91

GenotypeQuality
all individuals: 3860
bin: 9.75e1
variant carriers: 317

Latino
type: Population
allele count: 61
allele frequency: 6.442754541613857e-3
allele num: 9468
num of homozygotes: 0

Other
type: Population
allele count: 18
allele frequency: 2.654867256637168e-2
allele num: 678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 117
allele frequency: 2.980132450331126e-2
allele num: 3926
num of homozygotes: 0

South Asian
type: Population
allele count: 291
allele frequency: 2.126571178018124e-2
allele num: 13684
num of homozygotes: 6

African
type: Population
allele count: 96
allele frequency: 1.186650185414091e-2
allele num: 8090
num of homozygotes: 0

East Asian
type: Population
allele count: 28
allele frequency: 3.818876159301691e-3
allele num: 7332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 879
allele frequency: 1.739010010683338e-2
allele num: 50546
num of homozygotes: 8

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

FS
type: SiteQuality
SIO_000300: 2.4444e1

MQ
type: SiteQuality
SIO_000300: 3.416e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

QD
type: SiteQuality
SIO_000300: 2.08e0

VQSLOD
type: SiteQuality
SIO_000300: -5.588e0

DP
type: SiteQuality
SIO_000300: 1.417683e6

GenotypeQuality
all individuals: 775
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3890
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.04582651391162e-4
allele num: 14664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.757839966249473e-5
allele num: 56888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.465e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 8.779999999999999e0

DP
type: SiteQuality
SIO_000300: 1.331476e6

VQSLOD
type: SiteQuality
SIO_000300: -3.937e0

FS
type: SiteQuality
SIO_000300: 8.375999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 8.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.675e0

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15925
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.061496001698394e-4
allele num: 56524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14586
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.546e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

DP
type: SiteQuality
SIO_000300: 1.290507e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 3.497e1

FS
type: SiteQuality
SIO_000300: 3.307e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 9.06e0

GenotypeQuality
all individuals: 535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 803
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variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 856
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8687
bin: 6.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.922011998154131e-4
allele num: 8668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.658e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.242889e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

QD
type: SiteQuality
SIO_000300: 1.243e1

VQSLOD
type: SiteQuality
SIO_000300: -2.326e0

GenotypeQuality
all individuals: 2754
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6216
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
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variant carriers: 0

GenotypeQuality
all individuals: 298
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variant carriers: 1

GenotypeQuality
all individuals: 797
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 534
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variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4280
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variant carriers: 0

GenotypeQuality
all individuals: 6502
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.464082762640245e-5
allele num: 54904
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.255930784259001e-3
allele num: 14332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.084e0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 1.387e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.77e-1

DP
type: SiteQuality
SIO_000300: 1.234755e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.123e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

QD
type: SiteQuality
SIO_000300: 1.081e1

MQ
type: SiteQuality
SIO_000300: 3.676e1

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 15

GenotypeQuality
all individuals: 2
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.333333333333333e-1
allele num: 6
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 3.333333333333333e-1
allele num: 24
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.333333333333333e-1
allele num: 12
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.0e-1
allele num: 10
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.94e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 3.185e1

QD
type: SiteQuality
SIO_000300: 1.156e1

VQSLOD
type: SiteQuality
SIO_000300: -2.754e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 9.206e3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 2492
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 10

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 6.75e1
variant carriers: 2

East Asian
type: Population
allele count: 3
allele frequency: 5.0e-1
allele num: 6
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.0e-1
allele num: 10
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 2.307692307692308e-1
allele num: 26
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.5e-1
allele num: 20
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.809523809523809e-1
allele num: 42
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.203e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

QD
type: SiteQuality
SIO_000300: 1.345e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.219e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

DP
type: SiteQuality
SIO_000300: 1.0696e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.0e-1
allele num: 20
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.25e-1
allele num: 16
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 2.857142857142857e-1
allele num: 14
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.142857142857143e-1
allele num: 14
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.11e-2

QD
type: SiteQuality
SIO_000300: 7.09e0

MQRankSum
type: SiteQuality
SIO_000300: -1.001e0

MQ
type: SiteQuality
SIO_000300: 3.112e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.699e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

DP
type: SiteQuality
SIO_000300: 1.0896e4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 17

GenotypeQuality
all individuals: 14
bin: 7.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1971
bin: 7.5e0
variant carriers: 35

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 40
bin: 9.75e1
variant carriers: 40

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3
bin: 6.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 4.444444444444444e-1
allele num: 18
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.0e-1
allele num: 6
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.210526315789473e-1
allele num: 38
num of homozygotes: 0

Latino
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allele frequency: 3.333333333333333e-1
allele num: 12
num of homozygotes: 0

South Asian
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allele frequency: 3.571428571428572e-1
allele num: 28
num of homozygotes: 0

MQ
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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BaseQRankSum
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 23

GenotypeQuality
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variant carriers: 12

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele frequency: 5.833333333333334e-1
allele num: 12
num of homozygotes: 1

Latino
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allele frequency: 3.75e-1
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European (Non-Finnish)
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allele frequency: 4.285714285714285e-1
allele num: 14
num of homozygotes: 0

Other
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allele num: 0
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East Asian
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allele frequency: NaN
allele num: 0
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South Asian
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allele frequency: 5.0e-1
allele num: 8
num of homozygotes: 0

MQRankSum
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MQ
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FS
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
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allele frequency: NaN
allele num: 0
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East Asian
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.245e3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
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SIO_000300: -7.31e-1

ClippingRankSum
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FS
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MQ
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SIO_000300: 3.338e1

MQRankSum
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SIO_000300: 7.31e-1

VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.609e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.130000000000001e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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allele frequency: 0.0e0
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Other
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

FS
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SIO_000300: 0.0e0

VQSLOD
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InbreedingCoeff
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SIO_000300: -7.96e-2

MQRankSum
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 3.107e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.776e3

GenotypeQuality
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variant carriers: 16

GenotypeQuality
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variant carriers: 23

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 30

GenotypeQuality
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variant carriers: 26

East Asian
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allele count: 22
allele frequency: 1.0e0
allele num: 22
num of homozygotes: 11

Other
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele count: 44
allele frequency: 6.470588235294118e-1
allele num: 68
num of homozygotes: 14

African
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allele count: 72
allele frequency: 9.0e-1
allele num: 80
num of homozygotes: 33

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele count: 10
allele frequency: 5.555555555555556e-1
allele num: 18
num of homozygotes: 3

European (Non-Finnish)
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allele count: 36
allele frequency: 5.806451612903226e-1
allele num: 62
num of homozygotes: 12

QD
type: SiteQuality
SIO_000300: 2.45e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 3.151e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
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DP
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VQSLOD
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InbreedingCoeff
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SIO_000300: 3.656e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 10

European (Non-Finnish)
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allele frequency: 1.060606060606061e-1
allele num: 66
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: NaN
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European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.325581395348837e-2
allele num: 86
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 2.0e-1
allele num: 70
num of homozygotes: 0

VQSLOD
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MQ
type: SiteQuality
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.31578947368421e-2
allele num: 76
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 8.771929824561403e-3
allele num: 114
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 80
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Other
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allele frequency: NaN
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European (Finnish)
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allele frequency: NaN
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BaseQRankSum
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QD
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VQSLOD
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: NaN
allele num: 0
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South Asian
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FS
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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African
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allele frequency: 2.631578947368421e-2
allele num: 266
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 4
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European (Non-Finnish)
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allele num: 204
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African
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East Asian
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Latino
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Other
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South Asian
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allele frequency: 0.0e0
allele num: 150
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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FS
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 5.080268238162975e-4
allele num: 9842
num of homozygotes: 0

Latino
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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FS
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VQSLOD
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MQ
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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allele num: 9472
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Other
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East Asian
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allele num: 8288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4444
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.724045185583647e-5
allele num: 14872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51876
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.471927e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 4.328e1

VQSLOD
type: SiteQuality
SIO_000300: -2.306e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

FS
type: SiteQuality
SIO_000300: 2.371e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

GenotypeQuality
all individuals: 5478
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18200
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2530
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.734006734006734e-5
allele num: 14850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 3.852e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.462785e6

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.046e0

VQSLOD
type: SiteQuality
SIO_000300: -3.843e0

FS
type: SiteQuality
SIO_000300: 6.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.345e0

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 5438
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.348799568384138e-4
allele num: 14828
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 4.523e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

QD
type: SiteQuality
SIO_000300: 3.376e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.175e-1

DP
type: SiteQuality
SIO_000300: 1.45918e6

GenotypeQuality
all individuals: 336
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13838
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0