11-95512897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95512897
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95512897
    reference: chr 11
allele count: 2
allele frequency: 1.678922803129512e-5
allele num: 119124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.253-46C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.612-46C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.612-46C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.612-46C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.612-46C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1744-46C>T
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3824
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3558
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6986
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3553
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/11-95512901-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95512901
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95512901
    reference: chr 11
allele count: 1
allele frequency: 8.393768466290626e-6
allele num: 119136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.612-50G>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1744-50G>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.612-50G>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.253-50G>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.612-50G>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.612-50G>T
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7005
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3810
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-95512992-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95512992
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95512992
    reference: chr 11
allele count: 1
allele frequency: 8.414958430105355e-6
allele num: 118836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+51A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+51A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+51A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+51A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+51A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+51A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 17091
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 999
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

11-95512994-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95512994
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95512994
    reference: chr 11
allele count: 2
allele frequency: 1.682340472064736e-5
allele num: 118882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+49A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+49A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+49A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+49A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+49A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+49A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6596
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-95512999-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95512999
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95512999
    reference: chr 11
allele count: 1
allele frequency: 8.407317729351627e-6
allele num: 118944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+44T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+44T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+44T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+44T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+44T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+44T>C
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2496
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

11-95513000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513000
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513000
    reference: chr 11
allele count: 1
allele frequency: 8.399549784131571e-6
allele num: 119054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+43A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+43A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+43A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+43A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+43A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+43A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6624
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-95513002-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513002
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513002
    reference: chr 11
allele count: 1
allele frequency: 8.399832003359932e-6
allele num: 119050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+41A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+41A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+41A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+41A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+41A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+41A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6621
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 56
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3891
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-95513004-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513004
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513004
    reference: chr 11
allele count: 1
allele frequency: 8.402655239055541e-6
allele num: 119010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+39G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+39G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+39G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+39G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+39G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+39G>A
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6608
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/11-95513010-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513010
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513010
    reference: chr 11
allele count: 2
allele frequency: 1.677767897589047e-5
allele num: 119206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+33T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+33T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+33T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+33T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+33T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+33T>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/11-95513011-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513011
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513011
    reference: chr 11
allele count: 10
allele frequency: 8.388276544701126e-5
allele num: 119214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+32T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+32T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+32T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+32T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+32T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+32T>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10901
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17084
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

11-95513015-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513015
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513015
    reference: chr 11
allele count: 1
allele frequency: 8.38208915190022e-6
allele num: 119302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+28T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+28T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+28T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+28T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+28T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+28T>C
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12232
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19611
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17079
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

11-95513016-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513016
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513016
    reference: chr 11
allele count: 4
allele frequency: 3.353622750976743e-5
allele num: 119274
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+27G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+27G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+27G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+27G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+27G>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+27G>A
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6693
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17081
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3871
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3360
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum

11-95513030-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513030
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513030
    reference: chr 11
allele count: 1
allele frequency: 8.357570287166115e-6
allele num: 119652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+13C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+13C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+13C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+13C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+13C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+13C>T
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-95513035-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513035
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513034
    reference: chr 11
allele count: 12
allele frequency: 1.001886886970461e-4
allele num: 119774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+7delA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+7delA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+7delA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+7delA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+7delA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+7delA
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11492
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21293
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: c.611+7delA
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: GT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

11-95513035-GTATT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513035
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513031
    reference: chr 11
allele count: 1
allele frequency: 8.349057391420508e-6
allele num: 119774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+4_252+7delAATA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+4_611+7delAATA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+4_611+7delAATA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+4_611+7delAATA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+4_1743+7delAATA
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+4_611+7delAATA
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 7.75e1
  variant carriers: 0
hgvs: c.611+4_611+7delAATA
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: GTATT
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-95513039-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513039
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513039
    reference: chr 11
allele count: 1
allele frequency: 8.344737808338063e-6
allele num: 119836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+4A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+4A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+4A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+4A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+4A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+4A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6832
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.611+4A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

11-95513040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513040
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513040
    reference: chr 11
allele count: 2
allele frequency: 1.668696914579405e-5
allele num: 119854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.611+3A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.611+3A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.611+3A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.611+3A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1743+3A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.252+3A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
hgvs: c.611+3A>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum

11-95513044-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513044
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513044
    reference: chr 11
allele count: 1
allele frequency: 8.337502084375522e-6
allele num: 119940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.610A>C
  hgvsp: ENSP00000381248.2:p.Ser204Arg
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.251A>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1742A>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.610A>C
  hgvsp: ENSP00000441168.1:p.Ser204Arg
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.610A>C
  hgvsp: ENSP00000444087.1:p.Ser204Arg
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.610A>C
  hgvsp: ENSP00000351631.5:p.Ser204Arg
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21582
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser204Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

11-95513050-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513050
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513050
    reference: chr 11
allele count: 1
allele frequency: 8.331666999933347e-6
allele num: 120024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1736A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.604A>T
  hgvsp: ENSP00000441168.1:p.Lys202Ter
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.604A>T
  hgvsp: ENSP00000444087.1:p.Lys202Ter
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.604A>T
  hgvsp: ENSP00000381248.2:p.Lys202Ter
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.245A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.604A>T
  hgvsp: ENSP00000351631.5:p.Lys202Ter
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17074
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys202Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-95513053-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513053
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513053
    reference: chr 11
allele count: 1
allele frequency: 8.329030001166064e-6
allele num: 120062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1733T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.601T>A
  hgvsp: ENSP00000351631.5:p.Trp201Arg
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.242T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.601T>A
  hgvsp: ENSP00000441168.1:p.Trp201Arg
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.601T>A
  hgvsp: ENSP00000444087.1:p.Trp201Arg
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.601T>A
  hgvsp: ENSP00000381248.2:p.Trp201Arg
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21696
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6858
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17074
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Trp201Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-95513055-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513055
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513055
    reference: chr 11
allele count: 3
allele frequency: 2.498542516865162e-5
allele num: 120070
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.599T>C
  hgvsp: ENSP00000351631.5:p.Leu200Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.599T>C
  hgvsp: ENSP00000441168.1:p.Leu200Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.599T>C
  hgvsp: ENSP00000381248.2:p.Leu200Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.599T>C
  hgvsp: ENSP00000444087.1:p.Leu200Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.240T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1731T>C
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17073
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21714
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu200Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

11-95513061-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513061
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513061
    reference: chr 11
allele count: 3
allele frequency: 2.497460914736684e-5
allele num: 120122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1725A>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.593A>C
  hgvsp: ENSP00000381248.2:p.Gln198Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.593A>C
  hgvsp: ENSP00000441168.1:p.Gln198Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.593A>C
  hgvsp: ENSP00000351631.5:p.Gln198Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.593A>C
  hgvsp: ENSP00000444087.1:p.Gln198Pro
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.234A>C
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21757
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln198Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

11-95513066-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513066
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513066
    reference: chr 11
allele count: 34
allele frequency: 2.830031629765274e-4
allele num: 120140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.588A>G
  hgvsp: ENST00000543641.1:c.588A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.229A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.588A>G
  hgvsp: ENST00000536839.1:c.588A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.588A>G
  hgvsp: ENST00000358780.5:c.588A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.588A>G
  hgvsp: ENST00000398187.2:c.588A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1720A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12378
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11685
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu196Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

11-95513072-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513072
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513072
    reference: chr 11
allele count: 19
allele frequency: 1.581540920290338e-4
allele num: 120136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.582A>G
  hgvsp: ENST00000536839.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.582A>G
  hgvsp: ENST00000543641.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1714A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.223A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.582A>G
  hgvsp: ENST00000358780.5:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.582A>G
  hgvsp: ENST00000398187.2:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12383
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17073
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro194Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-95513073-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513073
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513073
    reference: chr 11
allele count: 3
allele frequency: 2.497294597519354e-5
allele num: 120130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.581C>T
  hgvsp: ENSP00000444087.1:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1713C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.222C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.581C>T
  hgvsp: ENSP00000351631.5:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.581C>T
  hgvsp: ENSP00000441168.1:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.581C>T
  hgvsp: ENSP00000381248.2:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11718
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17061
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6874
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro194Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-95513082-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513082
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513082
    reference: chr 11
allele count: 4
allele frequency: 3.331667499583541e-5
allele num: 120060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.572A>G
  hgvsp: ENSP00000441168.1:p.Asn191Ser
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.213A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1704A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.572A>G
  hgvsp: ENSP00000351631.5:p.Asn191Ser
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.572A>G
  hgvsp: ENSP00000444087.1:p.Asn191Ser
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.572A>G
  hgvsp: ENSP00000381248.2:p.Asn191Ser
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3866
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn191Ser
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-95513086-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513086
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513086
    reference: chr 11
allele count: 4
allele frequency: 3.332500208281263e-5
allele num: 120030
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.568A>G
  hgvsp: ENSP00000351631.5:p.Ser190Gly
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.209A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.568A>G
  hgvsp: ENSP00000441168.1:p.Ser190Gly
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1700A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.568A>G
  hgvsp: ENSP00000444087.1:p.Ser190Gly
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.568A>G
  hgvsp: ENSP00000381248.2:p.Ser190Gly
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3858
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser190Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-95513089-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513089
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513089
    reference: chr 11
allele count: 2
allele frequency: 1.666916704172292e-5
allele num: 119982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1697A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.565A>G
  hgvsp: ENSP00000444087.1:p.Ile189Val
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.565A>G
  hgvsp: ENSP00000441168.1:p.Ile189Val
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.565A>G
  hgvsp: ENSP00000381248.2:p.Ile189Val
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.565A>G
  hgvsp: ENSP00000351631.5:p.Ile189Val
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.206A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21480
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile189Val
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

11-95513099-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513099
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513099
    reference: chr 11
allele count: 4
allele frequency: 3.338953905741331e-5
allele num: 119798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-9A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-9A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-9A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-9A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-9A>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-9A>T
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6844
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21158
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-95513102-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513102
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513102
    reference: chr 11
allele count: 1
allele frequency: 8.350451759440186e-6
allele num: 119754
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-12T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-12T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-12T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-12T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-12T>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-12T>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17049
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20995
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

11-95513107-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513107
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513107
    reference: chr 11
allele count: 28
allele frequency: 2.341567846928365e-4
allele num: 119578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-17A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-17A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-17A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-17A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-17A>G
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-17A>G
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12330
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8637
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-95513109-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513109
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513109
    reference: chr 11
allele count: 1
allele frequency: 8.368761088608442e-6
allele num: 119492
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-19T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-19T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-19T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-19T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-19T>A
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-19T>A
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20030
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-95513111-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513111
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513111
    reference: chr 11
allele count: 1
allele frequency: 8.371142995864656e-6
allele num: 119458
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-21T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-21T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-21T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-21T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-21T>C
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-21T>C
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8629
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19915
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6674
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3354
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

11-95513121-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513121
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513121
    reference: chr 11
allele count: 2
allele frequency: 1.680051073552636e-5
allele num: 119044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-31C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-31C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-31C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-31C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-31C>T
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-31C>T
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-95513123-CATTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95513123
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 95513119
    reference: chr 11
allele count: 1
allele frequency: 8.410004541402452e-6
allele num: 118906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000444087
  ensembl transcript: ENST00000543641
  gene symbol: FAM76B
  hgvsc: ENST00000543641.1:c.564-37_564-34delAAAT
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000381248
  ensembl transcript: ENST00000398187
  gene symbol: FAM76B
  hgvsc: ENST00000398187.2:c.564-37_564-34delAAAT
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000535919
  gene symbol: FAM76B
  hgvsc: ENST00000535919.1:n.205-37_205-34delAAAT
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl transcript: ENST00000545654
  gene symbol: FAM76B
  hgvsc: ENST00000545654.1:n.1696-37_1696-34delAAAT
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000351631
  ensembl transcript: ENST00000358780
  gene symbol: FAM76B
  hgvsc: ENST00000358780.5:c.564-37_564-34delAAAT
  variant of: http://identifiers.org/hgnc/28492
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000077458
  ensembl protein: ENSP00000441168
  ensembl transcript: ENST00000536839
  gene symbol: FAM76B
  hgvsc: ENST00000536839.1:c.564-37_564-34delAAAT
  variant of: http://identifiers.org/hgnc/28492
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16686
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: CATTT
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS

16-19586396-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586396
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586396
    reference: chr 16
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.676-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.409-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.184-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.409-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.413-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.676-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.676-24T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1833T>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.676-24T>C
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD

16-19586403-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586403
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586403
    reference: chr 16
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.413-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.676-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.409-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.184-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1840A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.409-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.676-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.676-17A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.676-17A>G
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

16-19586410-G-GTCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586410
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586414
    reference: chr 16
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: GTCTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.413-8_413-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.676-8_676-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.409-8_409-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.184-8_184-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.676-8_676-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1849_412+1852dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.409-8_409-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.676-8_676-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.676-8_676-5dupCTCT
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40631
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

16-19586423-CTGTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586423
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586419
    reference: chr 16
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.681_684delGTTT
  hgvsp: ENSP00000438852.1:p.Phe228TrpfsTer?
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.418_421delGTTT
  hgvsp: ENSP00000458116.2:p.Phe141TrpfsTer38
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.681_684delGTTT
  hgvsp: ENSP00000442468.1:p.Phe228TrpfsTer38
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.681_684delGTTT
  hgvsp: ENSP00000444363.1:p.Phe228TrpfsTer?
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.189_192delGTTT
  hgvsp: ENSP00000456425.1:p.Phe64TrpfsTer?
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.681_684delGTTT
  hgvsp: ENSP00000400815.3:p.Phe228TrpfsTer38
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.414_417delGTTT
  hgvsp: ENSP00000395973.2:p.Phe139TrpfsTer38
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.6_9delGTTT
  hgvsp: ENSP00000457190.1:p.Cys3TyrfsTer4
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1862_412+1865delGTTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.414_417delGTTT
  hgvsp: ENSP00000251143.5:p.Phe139TrpfsTer38
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe228TrpfsTer38
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: CTGTT
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

16-19586429-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586429
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586429
    reference: chr 16
allele count: 10
allele frequency: 8.245926512302922e-5
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.685A>T
  hgvsp: ENSP00000442468.1:p.Met229Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.422A>T
  hgvsp: ENSP00000458116.2:p.Met142Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.193A>T
  hgvsp: ENSP00000456425.1:p.Met65Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.685A>T
  hgvsp: ENSP00000400815.3:p.Met229Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.10A>T
  hgvsp: ENSP00000457190.1:p.Leu4Phe
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.685A>T
  hgvsp: ENSP00000444363.1:p.Met229Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1866A>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.685A>T
  hgvsp: ENSP00000438852.1:p.Met229Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.418A>T
  hgvsp: ENSP00000395973.2:p.Met140Leu
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.418A>T
  hgvsp: ENSP00000251143.5:p.Met140Leu
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6584
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met229Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-19586432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586432
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586432
    reference: chr 16
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.688G>A
  hgvsp: ENSP00000400815.3:p.Gly230Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.688G>A
  hgvsp: ENSP00000442468.1:p.Gly230Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.13G>A
  hgvsp: ENSP00000457190.1:p.Trp5Ter
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.421G>A
  hgvsp: ENSP00000251143.5:p.Gly141Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.421G>A
  hgvsp: ENSP00000395973.2:p.Gly141Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1869G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.688G>A
  hgvsp: ENSP00000438852.1:p.Gly230Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.425G>A
  hgvsp: ENSP00000458116.2:p.Gly143Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.196G>A
  hgvsp: ENSP00000456425.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.688G>A
  hgvsp: ENSP00000444363.1:p.Gly230Arg
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40634
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Trp5Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

16-19586434-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586434
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586434
    reference: chr 16
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1871A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.690A>G
  hgvsp: ENST00000538853.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.427A>G
  hgvsp: ENST00000513947.4:c.427A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.423A>G
  hgvsp: ENST00000251143.5:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.690A>G
  hgvsp: ENST00000539322.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.690A>G
  hgvsp: ENST00000542263.1:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.690A>G
  hgvsp: ENST00000438132.3:c.690A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.198A>G
  hgvsp: ENST00000544670.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.15A>G
  hgvsp: ENSP00000457190.1:p.Asp6Gly
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.423A>G
  hgvsp: ENST00000417362.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6584
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2773
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp6Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

16-19586444-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586444
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586444
    reference: chr 16
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.700G>C
  hgvsp: ENSP00000400815.3:p.Gly234Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.437G>C
  hgvsp: ENSP00000458116.2:p.Gly147Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25G>C
  hgvsp: ENSP00000457190.1:p.Lys9Asn
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.700G>C
  hgvsp: ENSP00000438852.1:p.Asp234His
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1881G>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.700G>C
  hgvsp: ENSP00000444363.1:p.Asp234His
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.433G>C
  hgvsp: ENSP00000251143.5:p.Gly145Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.700G>C
  hgvsp: ENSP00000442468.1:p.Gly234Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.208G>C
  hgvsp: ENSP00000456425.1:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.433G>C
  hgvsp: ENSP00000395973.2:p.Gly145Arg
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly234Arg
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-19586461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586461
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586461
    reference: chr 16
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.437+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.700+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1898G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.700+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.433+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.700+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.433+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.700+17G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.208+17G>A
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-19586464-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586463
    reference: chr 16
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.433+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1905delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.433+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.208+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.700+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.700+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.700+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.437+24delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.700+24delT
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5611
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: GT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/16-19586478-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586478
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586478
    reference: chr 16
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.700+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.433+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.700+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.700+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1915A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.437+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.700+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.208+34A>C
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.433+34A>C
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

16-19586480-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586480
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586480
    reference: chr 16
allele count: 17
allele frequency: 1.402061855670103e-4
allele num: 121250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.208+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.700+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.700+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1917T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.433+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.700+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.700+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.433+36T>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.437+36T>A
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6763
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7152
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD

16-19586496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19586496
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19586496
    reference: chr 16
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.437+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.433+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.700+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.433+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.700+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.700+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.700+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.208+52G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.412+1933G>A
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6759
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

16-19589576-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589576
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589576
    reference: chr 16
allele count: 15
allele frequency: 1.394829830760647e-3
allele num: 10754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3132C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-50C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-798C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-50C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-798C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-798C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-798C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-798C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-798C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-798C>T
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

16-19589579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589579
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589579
    reference: chr 16
allele count: 1
allele frequency: 9.297136481963555e-5
allele num: 10756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-47G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3135G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-795G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-47G>A
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4072
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum

16-19589590-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589590
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589590
    reference: chr 16
allele count: 2
allele frequency: 1.859081613682841e-4
allele num: 10758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-36C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-784C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-36C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3146C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-784C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-784C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-784C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-784C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-784C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-784C>T
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

16-19589608-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589609
    reference: chr 16
allele count: 1328
allele frequency: 1.662493740610916e-1
allele num: 7988
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-4dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3178dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-752dupT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-4dupT
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.75e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 334
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.25e1
  variant carriers: 78
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

16-19589608-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589610
    reference: chr 16
allele count: 86
allele frequency: 1.076614922383575e-2
allele num: 7988
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-5_701-4dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-5_701-4dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-753_701-752dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-753_434-752dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-753_209-752dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-753_701-752dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-753_438-752dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3177_25+3178dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-753_434-752dupTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-753_413-752dupTT
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 5
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

16-19589608-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589607
    reference: chr 16
allele count: 2118
allele frequency: 2.651477215823735e-1
allele num: 7988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-4delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-752delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-752delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-752delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-752delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3178delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-752delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-752delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-4delT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-752delT
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 414
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 452
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.75e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 322
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 402
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 2.5e0
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.25e1
  variant carriers: 109
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: CT
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

16-19589608-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589606
    reference: chr 16
allele count: 188
allele frequency: 2.353530295443165e-2
allele num: 7988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-753_413-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-753_434-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-753_438-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-753_209-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-753_701-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-5_701-4delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-5_701-4delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-753_434-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-753_701-752delTT
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3177_25+3178delTT
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 9
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: CTT
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

16-19589608-CTTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589605
    reference: chr 16
allele count: 20
allele frequency: 2.503755633450175e-3
allele num: 7988
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 104
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.282051282051282e-2
  allele num: 78
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 146
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: CTTT
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

16-19589608-CTTTTTTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589601
    reference: chr 16
allele count: 64
allele frequency: 8.01201802704056e-3
allele num: 7988
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 9.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 2
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 146
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 104
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.19047619047619e-2
  allele num: 84
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: CTTTTTTT
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

16-19589615-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589615
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589615
    reference: chr 16
allele count: 13
allele frequency: 1.247361350988294e-3
allele num: 10422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.701-11T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-759T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.701-11T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-759T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-759T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-759T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3171T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-759T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-759T>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-759T>G
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

16-19589637-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589637
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589637
    reference: chr 16
allele count: 5
allele frequency: 4.657228017883756e-4
allele num: 10736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-737A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-737A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-737A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.712A>G
  hgvsp: ENSP00000444363.1:p.Ser238Gly
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-737A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.25+3193A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.712A>G
  hgvsp: ENSP00000438852.1:p.Ser238Gly
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-737A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-737A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-737A>G
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser238Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-19589652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589652
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589652
    reference: chr 16
allele count: 2
allele frequency: 1.864628006712661e-4
allele num: 10726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-722C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-722C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3195C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-722C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.727C>T
  hgvsp: ENSP00000438852.1:p.Arg243Cys
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-722C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-722C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.727C>T
  hgvsp: ENSP00000444363.1:p.Arg243Cys
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-722C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-722C>T
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg243Cys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

16-19589653-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589653
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589653
    reference: chr 16
allele count: 1
allele frequency: 9.324878776575905e-5
allele num: 10724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-721G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-721G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-721G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3194G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-721G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.728G>A
  hgvsp: ENSP00000444363.1:p.Arg243His
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-721G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-721G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.728G>A
  hgvsp: ENSP00000438852.1:p.Arg243His
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-721G>A
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg243His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-19589658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589658
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589658
    reference: chr 16
allele count: 3
allele frequency: 2.799552071668533e-4
allele num: 10716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-716C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.733C>T
  hgvsp: ENSP00000438852.1:p.Arg245Cys
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3189C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-716C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.733C>T
  hgvsp: ENSP00000444363.1:p.Arg245Cys
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-716C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-716C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-716C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-716C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-716C>T
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3528
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg245Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

16-19589659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589659
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589659
    reference: chr 16
allele count: 14
allele frequency: 1.305239604698863e-3
allele num: 10726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.734G>A
  hgvsp: ENSP00000438852.1:p.Arg245His
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3188G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-715G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.734G>A
  hgvsp: ENSP00000444363.1:p.Arg245His
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg245His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

16-19589661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589661
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589661
    reference: chr 16
allele count: 2
allele frequency: 1.863585538576221e-4
allele num: 10732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.736A>G
  hgvsp: ENSP00000444363.1:p.Thr246Ala
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.736A>G
  hgvsp: ENSP00000438852.1:p.Thr246Ala
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3186A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-713A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-713A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-713A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-713A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-713A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-713A>G
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-713A>G
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr246Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

16-19589668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589668
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589668
    reference: chr 16
allele count: 30
allele frequency: 2.796420581655481e-3
allele num: 10728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.743C>T
  hgvsp: ENSP00000444363.1:p.Ala248Val
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-706C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.743C>T
  hgvsp: ENSP00000438852.1:p.Ala248Val
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-706C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-706C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-706C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-706C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-706C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3179C>T
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-706C>T
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3531
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala248Val
num of homozygotes: 1
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-19589669-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589669
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589669
    reference: chr 16
allele count: 2
allele frequency: 1.86811133943583e-4
allele num: 10706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.744G>A
  hgvsp: ENST00000538853.1:c.744G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3178G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-705G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.744G>A
  hgvsp: ENST00000539322.1:c.744G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-705G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-705G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-705G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-705G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-705G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-705G>A
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala248Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-19589681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589681
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589681
    reference: chr 16
allele count: 6
allele frequency: 5.610622779128483e-4
allele num: 10694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-693G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-693G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-693G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-693G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3166G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-693G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.755+1G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.755+1G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-693G>A
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-693G>A
  variant of: http://identifiers.org/hgnc/24641
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
hgvs: c.755+1G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/16-19589695-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589695
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589696
    reference: chr 16
allele count: 895
allele frequency: 1.426977040816327e-1
allele num: 6272
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3139dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-666dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.755+28dupA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.755+28dupA
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 6.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 2.5e0
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 46
num of homozygotes: 3
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/16-19589695-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589695
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589697
    reference: chr 16
allele count: 8
allele frequency: 1.275510204081633e-3
allele num: 6272
alternate allele: CAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-667_701-666dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-667_413-666dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-667_209-666dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-667_701-666dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.755+27_755+28dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.755+27_755+28dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-667_434-666dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3140_26-3139dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-667_438-666dupAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-667_434-666dupAA
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-19589695-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589695
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589694
    reference: chr 16
allele count: 1931
allele frequency: 3.078762755102041e-1
allele num: 6272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-666delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-666delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.755+28delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-666delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-666delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3139delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.755+28delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-666delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-666delA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-666delA
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 659
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 648
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.75e1
  variant carriers: 376
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 6.25e1
  variant carriers: 86
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CA
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-19589695-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19589695
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 19589693
    reference: chr 16
allele count: 109
allele frequency: 1.737882653061225e-2
allele num: 6272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000457190
  ensembl transcript: ENST00000563649
  gene symbol: C16orf62
  hgvsc: ENST00000563649.1:c.26-3140_26-3139delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000400815
  ensembl transcript: ENST00000438132
  gene symbol: C16orf62
  hgvsc: ENST00000438132.3:c.701-667_701-666delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000456425
  ensembl transcript: ENST00000544670
  gene symbol: C16orf62
  hgvsc: ENST00000544670.1:c.209-667_209-666delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000251143
  ensembl transcript: ENST00000251143
  gene symbol: C16orf62
  hgvsc: ENST00000251143.5:c.434-667_434-666delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000438852
  ensembl transcript: ENST00000539322
  gene symbol: C16orf62
  hgvsc: ENST00000539322.1:c.755+27_755+28delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000458116
  ensembl transcript: ENST00000513947
  gene symbol: C16orf62
  hgvsc: ENST00000513947.4:c.438-667_438-666delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000444363
  ensembl transcript: ENST00000538853
  gene symbol: C16orf62
  hgvsc: ENST00000538853.1:c.755+27_755+28delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000455045
  ensembl transcript: ENST00000567245
  gene symbol: C16orf62
  hgvsc: ENST00000567245.1:c.413-667_413-666delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000395973
  ensembl transcript: ENST00000417362
  gene symbol: C16orf62
  hgvsc: ENST00000417362.2:c.434-667_434-666delAA
  variant of: http://identifiers.org/hgnc/24641
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000103544
  ensembl protein: ENSP00000442468
  ensembl transcript: ENST00000542263
  gene symbol: C16orf62
  hgvsc: ENST00000542263.1:c.701-667_701-666delAA
  variant of: http://identifiers.org/hgnc/24641
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 6
num of homozygotes: 0
reference allele: CAA

GenotypeQuality
all individuals: 92
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26904
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 505
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033704456511847e-5
allele num: 65926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.472649e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.958e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

FS
type: SiteQuality
SIO_000300: 6.245e0

QD
type: SiteQuality
SIO_000300: 1.266e1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e-1

GenotypeQuality
all individuals: 516
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26903
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.031353135313531e-4
allele num: 9696
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.228e0

FS
type: SiteQuality
SIO_000300: 3.11e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.469e0

QD
type: SiteQuality
SIO_000300: 1.304e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.629e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.063e0

DP
type: SiteQuality
SIO_000300: 2.472824e6

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.522533495736906e-4
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
SIO_000300: 2.299724e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.189e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.88e0

VQSLOD
type: SiteQuality
SIO_000300: -2.758e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.664e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 805
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16118
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17087
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2826
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3924
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65930
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.327205026762858e-4
allele num: 8594
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 3.694e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.9e-2

DP
type: SiteQuality
SIO_000300: 2.30025e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

QD
type: SiteQuality
SIO_000300: 1.764e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.06e0

GenotypeQuality
all individuals: 781
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17086
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6584
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516300227445034e-5
allele num: 65950
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

FS
type: SiteQuality
SIO_000300: 2.079e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: -1.508e0

MQRankSum
type: SiteQuality
SIO_000300: -2.068e0

QD
type: SiteQuality
SIO_000300: 1.654e1

DP
type: SiteQuality
SIO_000300: 2.303443e6

GenotypeQuality
all individuals: 1638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17093
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.753e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.664e1

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

DP
type: SiteQuality
SIO_000300: 2.304068e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.818e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
all individuals: 889
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17091
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.291682395872656e-5
allele num: 15894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65990
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.641e-1

DP
type: SiteQuality
SIO_000300: 2.305571e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.698e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

GenotypeQuality
all individuals: 17082
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2828
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3371
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515702679762338e-5
allele num: 65976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.874e0

FS
type: SiteQuality
SIO_000300: 5.727e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

DP
type: SiteQuality
SIO_000300: 2.307941e6

GenotypeQuality
all individuals: 860
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17082
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18955
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.251877816725087e-4
allele num: 15976
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.314416e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.347e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

QD
type: SiteQuality
SIO_000300: 8.76e0

GenotypeQuality
all individuals: 2825
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2492
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.775008775008775e-5
allele num: 11396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66042
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 9.238349414904537e-4
allele num: 9742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15978
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

QD
type: SiteQuality
SIO_000300: 1.565e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 6.37e-1

DP
type: SiteQuality
SIO_000300: 2.316187e6

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

GenotypeQuality
all individuals: 2488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.244536030972898e-5
allele num: 16014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 2.320325e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.662e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

MQRankSum
type: SiteQuality
SIO_000300: -1.184e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.204e0

VQSLOD
type: SiteQuality
SIO_000300: -5.971e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

GenotypeQuality
all individuals: 401
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2826
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19771
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.104247896572953e-4
allele num: 9746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15996
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.179e0

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 5.688e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.049e1

DP
type: SiteQuality
SIO_000300: 2.322124e6

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
all individuals: 2495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17078
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3883
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510665296996797e-5
allele num: 66196
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.439e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

DP
type: SiteQuality
SIO_000300: 2.335032e6

QD
type: SiteQuality
SIO_000300: 1.238e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17085
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.660527745909063e-4
allele num: 66244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156877231867996e-5
allele num: 16242
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

QD
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SIO_000300: 1.693e1

DP
type: SiteQuality
SIO_000300: 2.338498e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

FS
type: SiteQuality
SIO_000300: 1.195e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

MQ
type: SiteQuality
SIO_000300: 6.034e1

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17085
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509570678099149e-5
allele num: 66244
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

MQ
type: SiteQuality
SIO_000300: 6.034e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-2

FS
type: SiteQuality
SIO_000300: 1.195e0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 2.338498e6

QD
type: SiteQuality
SIO_000300: 1.693e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17076
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.024800163968026e-4
allele num: 9758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 2.339446e6

FS
type: SiteQuality
SIO_000300: 4.235e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.436e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

QD
type: SiteQuality
SIO_000300: 1.655e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

VQSLOD
type: SiteQuality
SIO_000300: -1.676e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1632
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.035822707953856e-4
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.720000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

FS
type: SiteQuality
SIO_000300: 2.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.435e1

DP
type: SiteQuality
SIO_000300: 2.340042e6

MQRankSum
type: SiteQuality
SIO_000300: 8.79e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508022680661117e-5
allele num: 66312
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.341512e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.225e0

FS
type: SiteQuality
SIO_000300: 1.675e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.259e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507159005275056e-5
allele num: 66350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

DP
type: SiteQuality
SIO_000300: 2.342714e6

MQ
type: SiteQuality
SIO_000300: 5.877e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.52e-1

QD
type: SiteQuality
SIO_000300: 1.521e1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.331e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.383e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.166e1

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.891e0

DP
type: SiteQuality
SIO_000300: 2.34313e6

FS
type: SiteQuality
SIO_000300: 2.471e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.52147701582517e-5
allele num: 66350
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

QD
type: SiteQuality
SIO_000300: 9.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 8.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01313727853441e-5
allele num: 66376
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 896
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.343924e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 34

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3874
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 33
allele frequency: 2.013668537954601e-3
allele num: 16388
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

DP
type: SiteQuality
SIO_000300: 2.344952e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 4.26e-1

QD
type: SiteQuality
SIO_000300: 1.187e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740947075208914e-4
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.740733155846815e-3
allele num: 9766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.414e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

DP
type: SiteQuality
SIO_000300: 2.344166e6

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3368
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.83127823220608e-4
allele num: 16382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.343364e6

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

QD
type: SiteQuality
SIO_000300: 1.217e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeQuality
all individuals: 1627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17058
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.074400491904078e-4
allele num: 9758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506795648374167e-5
allele num: 66366
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

FS
type: SiteQuality
SIO_000300: 2.515e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.85e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

DP
type: SiteQuality
SIO_000300: 2.342353e6

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17058
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.028272598486903e-5
allele num: 66354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.04e-1

DP
type: SiteQuality
SIO_000300: 2.341724e6

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

FS
type: SiteQuality
SIO_000300: 1.977e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.903e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.253e0

QD
type: SiteQuality
SIO_000300: 1.217e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6870
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3858
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17054
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2496
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.035822707953856e-4
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.34064e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.363e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 3.616e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.89e-1

GenotypeQuality
all individuals: 3362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17052
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.645760743321719e-4
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.336888e6

FS
type: SiteQuality
SIO_000300: 2.063e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.12e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

GenotypeQuality
all individuals: 3362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6831
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQ
type: SiteQuality
SIO_000300: 5.922e1

QD
type: SiteQuality
SIO_000300: 1.512e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 2.334887e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.46e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17061
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 3358
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20353
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.188884762965714e-5
allele num: 16158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.475685314473963e-4
allele num: 66174
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.484320557491289e-4
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.5220700152207e-4
allele num: 6570
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

FS
type: SiteQuality
SIO_000300: 1.514e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.812e0

DP
type: SiteQuality
SIO_000300: 2.327476e6

QD
type: SiteQuality
SIO_000300: 1.248e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

GenotypeQuality
all individuals: 270
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17039
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

FS
type: SiteQuality
SIO_000300: 5.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.95e0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-2

DP
type: SiteQuality
SIO_000300: 2.323194e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17039
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.029654036243822e-4
allele num: 9712
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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MQRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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SIO_000300: 1.1e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
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allele frequency: 6.240639041437844e-5
allele num: 16024
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65904
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

African
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allele frequency: 1.03327133705311e-4
allele num: 9678
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele frequency: 6.256256256256256e-5
allele num: 15984
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65816
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.702e1

ClippingRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.438e0

DP
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SIO_000300: 3.053111e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 4.119e0

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 3.054868e6

FS
type: SiteQuality
SIO_000300: 3.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.98e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.391e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
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DP
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.597e1

MQRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.942e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele num: 6612
num of homozygotes: 0

Other
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South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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East Asian
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MQ
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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African
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European (Finnish)
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European (Non-Finnish)
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Other
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South Asian
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allele frequency: 3.635482307319437e-4
allele num: 16504
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MQ
type: SiteQuality
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QD
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VQSLOD
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

Other
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African
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Latino
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European (Non-Finnish)
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allele frequency: 1.5001500150015e-5
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South Asian
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East Asian
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MQRankSum
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
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allele num: 8652
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66660
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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DP
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FS
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VQSLOD
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InbreedingCoeff
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QD
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66654
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Other
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

ClippingRankSum
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MQ
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SIO_000300: 6.004e1

MQRankSum
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FS
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ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66646
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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QD
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InbreedingCoeff
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SIO_000300: 7.4e-3

MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16502
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
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Other
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66576
num of homozygotes: 0

African
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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MQ
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FS
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 7.446808510638298e-2
allele num: 188
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: NaN
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South Asian
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allele num: 7506
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Latino
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East Asian
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European (Non-Finnish)
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num of homozygotes: 0

QD
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InbreedingCoeff
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FS
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MQRankSum
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ReadPosRankSum
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SIO_000300: 5.35e-1

MQ
type: SiteQuality
SIO_000300: 5.818e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.373e0

VQSLOD
type: SiteQuality
SIO_000300: -3.029e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.45e-1

DP
type: SiteQuality
SIO_000300: 3.29649e5

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
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GenotypeQuality
all individuals: 176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
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GenotypeQuality
all individuals: 370
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 104
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 14
bin: 2.25e1
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GenotypeQuality
all individuals: 179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.67e0

MQ
type: SiteQuality
SIO_000300: 5.724e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.82e-2

QD
type: SiteQuality
SIO_000300: 1.285e1

DP
type: SiteQuality
SIO_000300: 3.29493e5

FS
type: SiteQuality
SIO_000300: 1.9865e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 179
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.673769287288758e-4
allele num: 2722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 8.474576271186441e-3
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.027e-1

QD
type: SiteQuality
SIO_000300: 1.047e1

FS
type: SiteQuality
SIO_000300: 1.118e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

DP
type: SiteQuality
SIO_000300: 3.29113e5

MQ
type: SiteQuality
SIO_000300: 5.89e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

GenotypeQuality
all individuals: 927
bin: 2.5e0
variant carriers: 42

GenotypeQuality
all individuals: 1157
bin: 9.75e1
variant carriers: 436

GenotypeQuality
all individuals: 153
bin: 6.75e1
variant carriers: 55

GenotypeQuality
all individuals: 190
bin: 5.25e1
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GenotypeQuality
all individuals: 216
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variant carriers: 63

GenotypeQuality
all individuals: 880
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GenotypeQuality
all individuals: 207
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variant carriers: 74

GenotypeQuality
all individuals: 259
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variant carriers: 74

GenotypeQuality
all individuals: 292
bin: 2.25e1
variant carriers: 78

GenotypeQuality
all individuals: 244
bin: 1.75e1
variant carriers: 59

GenotypeQuality
all individuals: 223
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variant carriers: 62

GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 45

GenotypeQuality
all individuals: 145
bin: 7.75e1
variant carriers: 49

GenotypeQuality
all individuals: 247
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variant carriers: 68

GenotypeQuality
all individuals: 112
bin: 9.25e1
variant carriers: 50

GenotypeQuality
all individuals: 131
bin: 8.25e1
variant carriers: 51

South Asian
type: Population
allele count: 932
allele frequency: 1.657183499288762e-1
allele num: 5624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 322
allele frequency: 1.649590163934426e-1
allele num: 1952
num of homozygotes: 0

African
type: Population
allele count: 29
allele frequency: 1.986301369863014e-1
allele num: 146
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 2.051282051282051e-1
allele num: 78
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.442307692307692e-1
allele num: 104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 14
allele frequency: 1.666666666666667e-1
allele num: 84
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQ
type: SiteQuality
SIO_000300: 5.741e1

DP
type: SiteQuality
SIO_000300: 2.21133e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 253
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 190
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 244
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variant carriers: 4

GenotypeQuality
all individuals: 259
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GenotypeQuality
all individuals: 223
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 880
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GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 1157
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variant carriers: 25

GenotypeQuality
all individuals: 136
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GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 216
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variant carriers: 3

GenotypeQuality
all individuals: 207
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 112
bin: 9.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 1.024590163934426e-2
allele num: 1952
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.84931506849315e-3
allele num: 146
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.282051282051282e-2
allele num: 78
num of homozygotes: 0

South Asian
type: Population
allele count: 62
allele frequency: 1.102418207681366e-2
allele num: 5624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 9.615384615384616e-3
allele num: 104
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.19047619047619e-2
allele num: 84
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 2.21133e5

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.741e1

GenotypeQuality
all individuals: 880
bin: 7.5e0
variant carriers: 124

GenotypeQuality
all individuals: 216
bin: 3.75e1
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GenotypeQuality
all individuals: 247
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variant carriers: 131

GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 253
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 223
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variant carriers: 125

GenotypeQuality
all individuals: 197
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GenotypeQuality
all individuals: 153
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GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 112
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GenotypeQuality
all individuals: 131
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variant carriers: 70

GenotypeQuality
all individuals: 1157
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variant carriers: 613

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 79

East Asian
type: Population
allele count: 32
allele frequency: 3.076923076923077e-1
allele num: 104
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 2.261904761904762e-1
allele num: 84
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 2.602739726027397e-1
allele num: 146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 531
allele frequency: 2.720286885245902e-1
allele num: 1952
num of homozygotes: 0

South Asian
type: Population
allele count: 1480
allele frequency: 2.631578947368421e-1
allele num: 5624
num of homozygotes: 0

Latino
type: Population
allele count: 18
allele frequency: 2.307692307692308e-1
allele num: 78
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.741e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

FS
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

DP
type: SiteQuality
SIO_000300: 2.21133e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 927
bin: 2.5e0
variant carriers: 36

GenotypeQuality
all individuals: 1157
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 112
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GenotypeQuality
all individuals: 207
bin: 4.75e1
variant carriers: 16

GenotypeQuality
all individuals: 259
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variant carriers: 21

GenotypeQuality
all individuals: 247
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variant carriers: 13

GenotypeQuality
all individuals: 253
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variant carriers: 22

GenotypeQuality
all individuals: 223
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variant carriers: 11

GenotypeQuality
all individuals: 145
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 153
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 131
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variant carriers: 9

GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 152
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variant carriers: 6

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 14

GenotypeQuality
all individuals: 190
bin: 6.25e1
variant carriers: 9

East Asian
type: Population
allele count: 2
allele frequency: 1.923076923076923e-2
allele num: 104
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.571428571428571e-2
allele num: 84
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 134
allele frequency: 2.382645803698435e-2
allele num: 5624
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.054794520547945e-2
allele num: 146
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.282051282051282e-2
allele num: 78
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 2.305327868852459e-2
allele num: 1952
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.741e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.34e0

QD
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

DP
type: SiteQuality
SIO_000300: 2.21133e5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

South Asian
type: Population
allele count: 16
allele frequency: 2.844950213371266e-3
allele num: 5624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.536885245901639e-3
allele num: 1952
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.741e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 2.21133e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

FS
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.75e0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 3.073770491803279e-3
allele num: 1952
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.282051282051282e-2
allele num: 78
num of homozygotes: 0

South Asian
type: Population
allele count: 56
allele frequency: 9.957325746799431e-3
allele num: 5624
num of homozygotes: 2

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

QD
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

MQ
type: SiteQuality
SIO_000300: 5.741e1

DP
type: SiteQuality
SIO_000300: 2.21133e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 253
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 2.5e0
variant carriers: 9

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 9.25e1
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GenotypeQuality
all individuals: 67
bin: 4.75e1
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GenotypeQuality
all individuals: 680
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GenotypeQuality
all individuals: 167
bin: 8.25e1
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GenotypeQuality
all individuals: 20
bin: 1.75e1
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GenotypeQuality
all individuals: 526
bin: 9.75e1
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GenotypeQuality
all individuals: 2429
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.901140684410646e-3
allele num: 2630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 1.099807533681606e-3
allele num: 7274
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.288e1

DP
type: SiteQuality
SIO_000300: 2.28861e5

VQSLOD
type: SiteQuality
SIO_000300: -3.321e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e0

FS
type: SiteQuality
SIO_000300: 2.077e0

MQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.052e0

GenotypeQuality
all individuals: 3501
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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African
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East Asian
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MQ
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VQSLOD
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DP
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MQRankSum
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 8.010680907877169e-4
allele num: 7490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.825e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.641e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

FS
type: SiteQuality
SIO_000300: 1.308e0

DP
type: SiteQuality
SIO_000300: 1.84411e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.76e0

QD
type: SiteQuality
SIO_000300: 1.276e1

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 44

GenotypeQuality
all individuals: 178
bin: 6.75e1
variant carriers: 48

GenotypeQuality
all individuals: 803
bin: 7.5e0
variant carriers: 37

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 37

GenotypeQuality
all individuals: 200
bin: 2.25e1
variant carriers: 39

GenotypeQuality
all individuals: 142
bin: 7.75e1
variant carriers: 49

GenotypeQuality
all individuals: 183
bin: 1.25e1
variant carriers: 37

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 35

GenotypeQuality
all individuals: 741
bin: 9.75e1
variant carriers: 355

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 42

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 38

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 34

GenotypeQuality
all individuals: 121
bin: 8.25e1
variant carriers: 39

GenotypeQuality
all individuals: 139
bin: 7.25e1
variant carriers: 36

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 39

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 46

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 42

Latino
type: Population
allele count: 4
allele frequency: 7.142857142857142e-2
allele num: 56
num of homozygotes: 0

East Asian
type: Population
allele count: 23
allele frequency: 2.090909090909091e-1
allele num: 110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 318
allele frequency: 2.064935064935065e-1
allele num: 1540
num of homozygotes: 2

African
type: Population
allele count: 32
allele frequency: 2.461538461538462e-1
allele num: 130
num of homozygotes: 1

South Asian
type: Population
allele count: 503
allele frequency: 1.153669724770642e-1
allele num: 4360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 15
allele frequency: 1.973684210526316e-1
allele num: 76
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.113e-1

MQ
type: SiteQuality
SIO_000300: 5.773e1

FS
type: SiteQuality
SIO_000300: 1.015e0

DP
type: SiteQuality
SIO_000300: 1.16846e5

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

QD
type: SiteQuality
SIO_000300: 3.85e0

GenotypeQuality
all individuals: 803
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 121
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1965
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 1

South Asian
type: Population
allele count: 6
allele frequency: 1.376146788990826e-3
allele num: 4360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 9.09090909090909e-3
allele num: 110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.31578947368421e-2
allele num: 76
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.85e0

FS
type: SiteQuality
SIO_000300: 1.015e0

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.773e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

DP
type: SiteQuality
SIO_000300: 1.16846e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.113e-1

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 68

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 127

GenotypeQuality
all individuals: 178
bin: 6.75e1
variant carriers: 119

GenotypeQuality
all individuals: 142
bin: 7.75e1
variant carriers: 88

GenotypeQuality
all individuals: 1965
bin: 2.5e0
variant carriers: 34

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 120

GenotypeQuality
all individuals: 189
bin: 1.75e1
variant carriers: 87

GenotypeQuality
all individuals: 121
bin: 8.25e1
variant carriers: 75

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 138

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 67

GenotypeQuality
all individuals: 803
bin: 7.5e0
variant carriers: 59

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 109

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 143

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 137

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 129

GenotypeQuality
all individuals: 741
bin: 9.75e1
variant carriers: 374

GenotypeQuality
all individuals: 139
bin: 7.25e1
variant carriers: 89

African
type: Population
allele count: 23
allele frequency: 1.769230769230769e-1
allele num: 130
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 2.636363636363636e-1
allele num: 110
num of homozygotes: 0

South Asian
type: Population
allele count: 1440
allele frequency: 3.302752293577982e-1
allele num: 4360
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 3.75e-1
allele num: 56
num of homozygotes: 0

Other
type: Population
allele count: 21
allele frequency: 2.763157894736842e-1
allele num: 76
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 397
allele frequency: 2.577922077922078e-1
allele num: 1540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

QD
type: SiteQuality
SIO_000300: 3.85e0

DP
type: SiteQuality
SIO_000300: 1.16846e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
SIO_000300: 1.015e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.113e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

MQ
type: SiteQuality
SIO_000300: 5.773e1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

GenotypeQuality
all individuals: 139
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 202
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 142
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 8

GenotypeQuality
all individuals: 178
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1965
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 139
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 803
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 189
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 200
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 4