14-53326377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326377
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326377
    reference: chr 14
allele count: 4
allele frequency: 3.299132328197684e-5
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1804C>T
  hgvsp: ENSP00000342858.4:p.Arg602Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1663C>T
  hgvsp: ENSP00000450741.1:p.Arg555Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.302C>T
  hgvsp: ENSP00000451134.1:p.Arg102Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1783C>T
  hgvsp: ENSP00000340391.3:p.Arg595Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1783C>T
  hgvsp: ENSP00000378993.2:p.Arg595Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1804C>T
  hgvsp: ENSP00000451084.1:p.Arg602Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.705C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.1019C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1804C>T
  hgvsp: ENSP00000382243.3:p.Arg602Trp
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3613C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg602Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

14-53326403-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326403
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326403
    reference: chr 14
allele count: 9
allele frequency: 7.462439056747704e-5
allele num: 120604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1757T>C
  hgvsp: ENSP00000378993.2:p.Ile586Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.993T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1778T>C
  hgvsp: ENSP00000451084.1:p.Ile593Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3587T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1637T>C
  hgvsp: ENSP00000450741.1:p.Ile546Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.276T>C
  hgvsp: ENSP00000451134.1:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1757T>C
  hgvsp: ENSP00000340391.3:p.Ile586Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1778T>C
  hgvsp: ENSP00000382243.3:p.Ile593Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1778T>C
  hgvsp: ENSP00000342858.4:p.Ile593Thr
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.679T>C
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12011
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile593Thr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

14-53326407-GTTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326407
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326404
    reference: chr 14
allele count: 1
allele frequency: 8.312690152787244e-6
allele num: 120298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.269_271delGAA
  hgvsp: ENSP00000451134.1:p.Glu91del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1771_1773delGAA
  hgvsp: ENSP00000342858.4:p.Glu591del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1771_1773delGAA
  hgvsp: ENSP00000451084.1:p.Glu591del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1771_1773delGAA
  hgvsp: ENSP00000382243.3:p.Glu591del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1750_1752delGAA
  hgvsp: ENSP00000378993.2:p.Glu584del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3580_3582delGAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1630_1632delGAA
  hgvsp: ENSP00000450741.1:p.Glu544del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1750_1752delGAA
  hgvsp: ENSP00000340391.3:p.Glu584del
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.672_674delGAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.986_988delGAA
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11890
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu591del
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: GTTC
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

14-53326409-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326409
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326409
    reference: chr 14
allele count: 1
allele frequency: 8.330001332800213e-6
allele num: 120048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.987A>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3581A>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1772A>T
  hgvsp: ENSP00000342858.4:p.Glu591Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.270A>T
  hgvsp: ENSP00000451134.1:p.Glu91Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1751A>T
  hgvsp: ENSP00000378993.2:p.Glu584Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1631A>T
  hgvsp: ENSP00000450741.1:p.Glu544Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1772A>T
  hgvsp: ENSP00000451084.1:p.Glu591Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.673A>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1751A>T
  hgvsp: ENSP00000340391.3:p.Glu584Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1772A>T
  hgvsp: ENSP00000382243.3:p.Glu591Val
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu591Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-53326421-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326421
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326421
    reference: chr 14
allele count: 1
allele frequency: 8.409863087428936e-6
allele num: 118908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1760G>T
  hgvsp: ENSP00000451084.1:p.Gly587Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.258G>T
  hgvsp: ENSP00000451134.1:p.Gly87Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3569G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1619G>T
  hgvsp: ENSP00000450741.1:p.Gly540Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1739G>T
  hgvsp: ENSP00000340391.3:p.Gly580Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1760G>T
  hgvsp: ENSP00000342858.4:p.Gly587Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1760G>T
  hgvsp: ENSP00000382243.3:p.Gly587Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.975G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.661G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1739G>T
  hgvsp: ENSP00000378993.2:p.Gly580Val
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10789
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly587Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-53326429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326429
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326429
    reference: chr 14
allele count: 1
allele frequency: 8.457660949287865e-6
allele num: 118236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1731C>T
  hgvsp: ENST00000341590.3:c.1731C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.967C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.653C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.250C>T
  hgvsp: ENST00000553663.1:c.250C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1752C>T
  hgvsp: ENST00000399304.3:c.1752C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3561C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1752C>T
  hgvsp: ENST00000553373.1:c.1752C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1611C>T
  hgvsp: ENST00000554152.1:c.1611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1731C>T
  hgvsp: ENST00000395631.2:c.1731C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1752C>T
  hgvsp: ENST00000343279.4:c.1752C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe584Phe
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

14-53326429-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326429
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326429
    reference: chr 14
allele count: 1
allele frequency: 8.457660949287865e-6
allele num: 118236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1731C>G
  hgvsp: ENSP00000378993.2:p.Phe577Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.653C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1752C>G
  hgvsp: ENSP00000342858.4:p.Phe584Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1611C>G
  hgvsp: ENSP00000450741.1:p.Phe537Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1752C>G
  hgvsp: ENSP00000451084.1:p.Phe584Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1731C>G
  hgvsp: ENSP00000340391.3:p.Phe577Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3561C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.250C>G
  hgvsp: ENSP00000451134.1:p.Phe84Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1752C>G
  hgvsp: ENSP00000382243.3:p.Phe584Leu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.967C>G
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe584Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

14-53326434-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326434
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326433
    reference: chr 14
allele count: 1
allele frequency: 8.501088139281828e-6
allele num: 117632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3555delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-3delT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-3delT
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1749-3delT
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: TA
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

14-53326435-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326435
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326435
    reference: chr 14
allele count: 2
allele frequency: 1.701374710766299e-5
allele num: 117552
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3555T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-3T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-3T>C
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10782
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10924
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1749-3T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ

14-53326436-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326436
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326436
    reference: chr 14
allele count: 4
allele frequency: 3.40506673930809e-5
allele num: 117472
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3554A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-4A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-4A>C
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1749-4A>C
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

14-53326436-TAAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326436
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326433
    reference: chr 14
allele count: 1
allele frequency: 8.512666848270226e-6
allele num: 117472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-7_1728-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-7_964-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-7_1728-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-7_1608-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-7_650-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3551_3553delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-7_1749-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-7_247-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-7_1749-5delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-7_1749-5delGTT
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1749-7_1749-5delGTT
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: TAAC
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-53326440-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326440
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326440
    reference: chr 14
allele count: 2
allele frequency: 1.713590486145621e-5
allele num: 116714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-8T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3550T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-8T>C
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1749-8T>C
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/14-53326454-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326454
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326454
    reference: chr 14
allele count: 95099
allele frequency: 8.358294222081597e-1
allele num: 113778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-22G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3536G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 6.75e1
  variant carriers: 352
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 482
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 275
genotype depth: GenotypeDepth
  all individuals: 7380
  bin: 2.75e1
  variant carriers: 6838
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 3.25e1
  variant carriers: 3205
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.75e1
  variant carriers: 439
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 7.5e0
  variant carriers: 2647
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 857
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 2.25e1
  variant carriers: 12051
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 9.75e1
  variant carriers: 2780
genotype depth: GenotypeDepth
  all individuals: 14719
  bin: 1.75e1
  variant carriers: 14426
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 1487
genotype depth: GenotypeDepth
  all individuals: 10589
  bin: 1.25e1
  variant carriers: 9849
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 260
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 618
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 199
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.75e1
  variant carriers: 791
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 7.5e0
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 4466
  bin: 4.75e1
  variant carriers: 4420
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 202
num of homozygotes: 40631
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

14-53326455-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326455
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326455
    reference: chr 14
allele count: 2
allele frequency: 2.05833316180557e-5
allele num: 97166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-23C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3535C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-23C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22891
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21728
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

14-53326457-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326457
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326457
    reference: chr 14
allele count: 1
allele frequency: 1.037021673752982e-5
allele num: 96430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3533A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-25A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-25A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6876
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4759
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-53326461-AAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326461
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326458
    reference: chr 14
allele count: 2
allele frequency: 2.115148694953255e-5
allele num: 94556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-32_247-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-32_1749-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-32_1728-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-32_1749-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-32_650-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-32_964-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3526_3528delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-32_1608-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-32_1749-30delGTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-32_1728-30delGTT
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23772
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21507
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: AAAC
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

14-53326466-T-TTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326466
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326468
    reference: chr 14
allele count: 2
allele frequency: 2.178032365560952e-5
allele num: 91826
alternate allele: TTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-35_650-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-35_1749-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-35_1608-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-35_1749-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3523_3524insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-35_1749-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-35_1728-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-35_247-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-35_964-34insCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-35_1728-34insCA
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23252
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

14-53326469-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326469
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326469
    reference: chr 14
allele count: 2
allele frequency: 2.215968267334412e-5
allele num: 90254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3521A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-37A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-37A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12705
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4735
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

14-53326470-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326470
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326470
    reference: chr 14
allele count: 3
allele frequency: 3.357883190436749e-5
allele num: 89342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3520C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-38C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-38C>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22461
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

14-53326470-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326470
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326469
    reference: chr 14
allele count: 2
allele frequency: 2.238588793624499e-5
allele num: 89342
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3519delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-39delA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-39delA
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22461
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4759
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5952
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: GT
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

14-53326480-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326480
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326480
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 83326
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3510T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-48T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-48T>C
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 20172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15813
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5759
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4754
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4660
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

14-53326481-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326481
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326481
    reference: chr 14
allele count: 2
allele frequency: 2.417561164297457e-5
allele num: 82728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3509A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-49A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-49A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10075
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2975
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5271
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-53326481-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326481
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326481
    reference: chr 14
allele count: 1
allele frequency: 1.208780582148728e-5
allele num: 82728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1749-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1728-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.650-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1749-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.3509A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.247-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1608-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.964-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1749-49A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1728-49A>C
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20022
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7962
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5271
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS

14-53326483-T-TTGGACTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53326483
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53326491
    reference: chr 14
allele count: 3
allele frequency: 3.731621762818121e-5
allele num: 80394
alternate allele: TTGGACTGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19784
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16234
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7909
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-53327008-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327008
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327008
    reference: chr 14
allele count: 1
allele frequency: 8.462527926342156e-6
allele num: 118168
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2982A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+51A>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+51A>C
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13476
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-53327020-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327020
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327020
    reference: chr 14
allele count: 36
allele frequency: 3.046149159770523e-4
allele num: 118182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2970G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+39G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+39G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17606
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19476
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-53327028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327028
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327028
    reference: chr 14
allele count: 1
allele frequency: 8.431561019207096e-6
allele num: 118602
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2962C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+31C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+31C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6070
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

14-53327038-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327038
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327038
    reference: chr 14
allele count: 1
allele frequency: 8.380262805041566e-6
allele num: 119328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2952A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+21A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+21A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/14-53327041-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327041
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327041
    reference: chr 14
allele count: 1
allele frequency: 8.365960579593749e-6
allele num: 119532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+18T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2949T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+18T>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

14-53327046-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327046
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327046
    reference: chr 14
allele count: 1
allele frequency: 8.340700952508049e-6
allele num: 119894
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2944A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+13A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+13A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

14-53327048-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327048
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327048
    reference: chr 14
allele count: 1
allele frequency: 8.3301401129567e-6
allele num: 120046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2942C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+11C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+11C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7314
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/14-53327051-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327051
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327051
    reference: chr 14
allele count: 1
allele frequency: 8.320575118152166e-6
allele num: 120184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2939G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+8G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+8G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1748+8G>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-53327052-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327052
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327052
    reference: chr 14
allele count: 1
allele frequency: 8.314625426124552e-6
allele num: 120270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.246+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.649+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1727+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1748+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1748+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.963+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1607+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1748+7G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2938G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1727+7G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1748+7G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/14-53327064-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327064
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327064
    reference: chr 14
allele count: 73
allele frequency: 6.043446585866614e-4
allele num: 120792
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1722T>G
  hgvsp: ENSP00000378993.2:p.Ile574Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.644T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2926T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1602T>G
  hgvsp: ENSP00000450741.1:p.Ile534Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1743T>G
  hgvsp: ENSP00000342858.4:p.Ile581Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1722T>G
  hgvsp: ENSP00000340391.3:p.Ile574Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.241T>G
  hgvsp: ENSP00000451134.1:p.Ile81Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.958T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1743T>G
  hgvsp: ENSP00000451084.1:p.Ile581Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1743T>G
  hgvsp: ENSP00000382243.3:p.Ile581Met
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21823
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22535
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile581Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

14-53327091-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327091
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327091
    reference: chr 14
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1695A>G
  hgvsp: ENST00000341590.3:c.1695A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1716A>G
  hgvsp: ENST00000343279.4:c.1716A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1695A>G
  hgvsp: ENST00000395631.2:c.1695A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.214A>G
  hgvsp: ENST00000553663.1:c.214A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1575A>G
  hgvsp: ENST00000554152.1:c.1575A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.617A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1716A>G
  hgvsp: ENST00000553373.1:c.1716A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1716A>G
  hgvsp: ENST00000399304.3:c.1716A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2899A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.931A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu572Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-53327097-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327097
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327097
    reference: chr 14
allele count: 2
allele frequency: 1.65144584083365e-5
allele num: 121106
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1710G>A
  hgvsp: ENST00000343279.4:c.1710G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1710G>A
  hgvsp: ENST00000553373.1:c.1710G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.611G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1710G>A
  hgvsp: ENST00000399304.3:c.1710G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1569G>A
  hgvsp: ENST00000554152.1:c.1569G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1689G>A
  hgvsp: ENST00000395631.2:c.1689G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1689G>A
  hgvsp: ENST00000341590.3:c.1689G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.208G>A
  hgvsp: ENST00000553663.1:c.208G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2893G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.925G>A
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln570Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

14-53327106-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327106
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327106
    reference: chr 14
allele count: 3
allele frequency: 2.476637057094739e-5
allele num: 121132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2884A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1680A>G
  hgvsp: ENST00000341590.3:c.1680A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1701A>G
  hgvsp: ENST00000399304.3:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1560A>G
  hgvsp: ENST00000554152.1:c.1560A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1701A>G
  hgvsp: ENST00000553373.1:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1680A>G
  hgvsp: ENST00000395631.2:c.1680A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.199A>G
  hgvsp: ENST00000553663.1:c.199A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.602A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1701A>G
  hgvsp: ENST00000343279.4:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.916A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln567Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-53327118-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327118
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327118
    reference: chr 14
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1689G>T
  hgvsp: ENSP00000451084.1:p.Met563Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1689G>T
  hgvsp: ENSP00000382243.3:p.Met563Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.904G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1668G>T
  hgvsp: ENSP00000378993.2:p.Met556Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1668G>T
  hgvsp: ENSP00000340391.3:p.Met556Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.590G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2872G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.187G>T
  hgvsp: ENSP00000451134.1:p.Met63Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1548G>T
  hgvsp: ENSP00000450741.1:p.Met516Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1689G>T
  hgvsp: ENSP00000342858.4:p.Met563Ile
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6055
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met563Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-53327131-A-AGATGAGCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327131
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327139
    reference: chr 14
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: AGATGAGCT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsp: ENSP00000378993.2:p.Ile552LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.576_577insAGCTCATC
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsp: ENSP00000450741.1:p.Ile512LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsp: ENSP00000382243.3:p.Ile559LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsp: ENSP00000342858.4:p.Ile559LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.890_891insAGCTCATC
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsp: ENSP00000340391.3:p.Ile552LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsp: ENSP00000451084.1:p.Ile559LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.173_174insAGCTCATC
  hgvsp: ENSP00000451134.1:p.Ile59LysfsTer8
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 21654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7408
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile559LysfsTer8
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: A
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

14-53327132-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327132
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327132
    reference: chr 14
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.890A>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1534A>T
  hgvsp: ENSP00000450741.1:p.Ile512Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.173A>T
  hgvsp: ENSP00000451134.1:p.Ile59Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1654A>T
  hgvsp: ENSP00000340391.3:p.Ile552Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1654A>T
  hgvsp: ENSP00000378993.2:p.Ile552Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1675A>T
  hgvsp: ENSP00000451084.1:p.Ile559Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2858A>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1675A>T
  hgvsp: ENSP00000382243.3:p.Ile559Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1675A>T
  hgvsp: ENSP00000342858.4:p.Ile559Phe
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.576A>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile559Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-53327134-A-ATTCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327134
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327138
    reference: chr 14
allele count: 1
allele frequency: 8.261049153242462e-6
allele num: 121050
alternate allele: ATTCT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1672_1673insAGAA
  hgvsp: ENSP00000382243.3:p.Leu558GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1651_1652insAGAA
  hgvsp: ENSP00000378993.2:p.Leu551GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2855_2856insAGAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1672_1673insAGAA
  hgvsp: ENSP00000451084.1:p.Leu558GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1672_1673insAGAA
  hgvsp: ENSP00000342858.4:p.Leu558GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1651_1652insAGAA
  hgvsp: ENSP00000340391.3:p.Leu551GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.573_574insAGAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.170_171insAGAA
  hgvsp: ENSP00000451134.1:p.Leu58GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1531_1532insAGAA
  hgvsp: ENSP00000450741.1:p.Leu511GlnfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.887_888insAGAA
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 7262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu558GlnfsTer4
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

14-53327136-A-ATGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327136
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327139
    reference: chr 14
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: ATGG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1649_1650insCCA
  hgvsp: ENSP00000340391.3:p.Ser550_Leu551insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1529_1530insCCA
  hgvsp: ENSP00000450741.1:p.Ser510_Leu511insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.885_886insCCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1670_1671insCCA
  hgvsp: ENSP00000382243.3:p.Ser557_Leu558insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1670_1671insCCA
  hgvsp: ENSP00000342858.4:p.Ser557_Leu558insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1670_1671insCCA
  hgvsp: ENSP00000451084.1:p.Ser557_Leu558insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1649_1650insCCA
  hgvsp: ENSP00000378993.2:p.Ser550_Leu551insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.571_572insCCA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.168_169insCCA
  hgvsp: ENSP00000451134.1:p.Ser57_Leu58insHis
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2853_2854insCCA
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser557_Leu558insHis
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

14-53327136-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327136
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327136
    reference: chr 14
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2854T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1650T>C
  hgvsp: ENST00000395631.2:c.1650T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1671T>C
  hgvsp: ENST00000399304.3:c.1671T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1530T>C
  hgvsp: ENST00000554152.1:c.1530T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.169T>C
  hgvsp: ENST00000553663.1:c.169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.886T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.572T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1671T>C
  hgvsp: ENST00000343279.4:c.1671T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1671T>C
  hgvsp: ENST00000553373.1:c.1671T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1650T>C
  hgvsp: ENST00000341590.3:c.1650T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser557Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

14-53327136-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327136
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327136
    reference: chr 14
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1530T>A
  hgvsp: ENSP00000450741.1:p.Ser510Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1671T>A
  hgvsp: ENSP00000451084.1:p.Ser557Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.886T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1650T>A
  hgvsp: ENSP00000340391.3:p.Ser550Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1671T>A
  hgvsp: ENSP00000342858.4:p.Ser557Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1671T>A
  hgvsp: ENSP00000382243.3:p.Ser557Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1650T>A
  hgvsp: ENSP00000378993.2:p.Ser550Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.169T>A
  hgvsp: ENSP00000451134.1:p.Ser57Arg
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2854T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.572T>A
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22626
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser557Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

14-53327137-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327137
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327138
    reference: chr 14
allele count: 1
allele frequency: 8.263506701703935e-6
allele num: 121014
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.884dupA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2852dupA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1669dupA
  hgvsp: ENSP00000451084.1:p.Ser557LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1528dupA
  hgvsp: ENSP00000450741.1:p.Ser510LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.167dupA
  hgvsp: ENSP00000451134.1:p.Ser57LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1669dupA
  hgvsp: ENSP00000342858.4:p.Ser557LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1648dupA
  hgvsp: ENSP00000340391.3:p.Ser550LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1648dupA
  hgvsp: ENSP00000378993.2:p.Ser550LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1669dupA
  hgvsp: ENSP00000382243.3:p.Ser557LysfsTer4
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.570dupA
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser557LysfsTer4
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum

14-53327139-C-CAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327139
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327142
    reference: chr 14
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: CAAG
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1646_1647insCTT
  hgvsp: ENSP00000340391.3:p.Met549delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1667_1668insCTT
  hgvsp: ENSP00000451084.1:p.Met556delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1667_1668insCTT
  hgvsp: ENSP00000382243.3:p.Met556delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1646_1647insCTT
  hgvsp: ENSP00000378993.2:p.Met549delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.568_569insCTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.165_166insCTT
  hgvsp: ENSP00000451134.1:p.Met56delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2850_2851insCTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1526_1527insCTT
  hgvsp: ENSP00000450741.1:p.Met509delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.882_883insCTT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: protein_altering_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1667_1668insCTT
  hgvsp: ENSP00000342858.4:p.Met556delinsIleLeu
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: protein altering
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met556delinsIleLeu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

14-53327163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327163
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327163
    reference: chr 14
allele count: 1
allele frequency: 8.303027283747654e-6
allele num: 120438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.859G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1644G>A
  hgvsp: ENST00000399304.3:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1644G>A
  hgvsp: ENST00000553373.1:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1623G>A
  hgvsp: ENST00000395631.2:c.1623G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2827G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.142G>A
  hgvsp: ENST00000553663.1:c.142G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1644G>A
  hgvsp: ENST00000343279.4:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1623G>A
  hgvsp: ENST00000341590.3:c.1623G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.545G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1503G>A
  hgvsp: ENST00000554152.1:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu548Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

14-53327168-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327168
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327168
    reference: chr 14
allele count: 38
allele frequency: 3.158139689505003e-4
allele num: 120324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.854T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1639T>C
  hgvsp: ENST00000399304.3:c.1639T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.137T>C
  hgvsp: ENST00000553663.1:c.137T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1498T>C
  hgvsp: ENST00000554152.1:c.1498T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.540T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1618T>C
  hgvsp: ENST00000341590.3:c.1618T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2822T>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1618T>C
  hgvsp: ENST00000395631.2:c.1618T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1639T>C
  hgvsp: ENST00000553373.1:c.1639T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1639T>C
  hgvsp: ENST00000343279.4:c.1639T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20603
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7152
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22748
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu547Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

14-53327169-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327169
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327169
    reference: chr 14
allele count: 3
allele frequency: 2.495923325235449e-5
allele num: 120196
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1617C>G
  hgvsp: ENSP00000340391.3:p.Ile539Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.853C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1617C>G
  hgvsp: ENSP00000378993.2:p.Ile539Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1497C>G
  hgvsp: ENSP00000450741.1:p.Ile499Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.539C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.136C>G
  hgvsp: ENSP00000451134.1:p.Ile46Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1638C>G
  hgvsp: ENSP00000342858.4:p.Ile546Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2821C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1638C>G
  hgvsp: ENSP00000382243.3:p.Ile546Met
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1638C>G
  hgvsp: ENSP00000451084.1:p.Ile546Met
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile546Met
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

14-53327175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327175
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327175
    reference: chr 14
allele count: 24
allele frequency: 2.003807233744114e-4
allele num: 119772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2815G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1491G>A
  hgvsp: ENST00000554152.1:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1632G>A
  hgvsp: ENST00000343279.4:c.1632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.533G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1611G>A
  hgvsp: ENST00000395631.2:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1632G>A
  hgvsp: ENST00000399304.3:c.1632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.847G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.130G>A
  hgvsp: ENST00000553663.1:c.130G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1632G>A
  hgvsp: ENST00000553373.1:c.1632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1611G>A
  hgvsp: ENST00000341590.3:c.1611G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7120
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22419
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala544Ala
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

14-53327176-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327176
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327176
    reference: chr 14
allele count: 4
allele frequency: 3.341073486911344e-5
allele num: 119722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2814C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1631C>T
  hgvsp: ENSP00000382243.3:p.Ala544Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.532C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1631C>T
  hgvsp: ENSP00000342858.4:p.Ala544Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1610C>T
  hgvsp: ENSP00000378993.2:p.Ala537Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1610C>T
  hgvsp: ENSP00000340391.3:p.Ala537Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.129C>T
  hgvsp: ENSP00000451134.1:p.Ala44Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1490C>T
  hgvsp: ENSP00000450741.1:p.Ala497Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1631C>T
  hgvsp: ENSP00000451084.1:p.Ala544Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.846C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22405
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19811
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala544Val
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

14-53327179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327179
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327179
    reference: chr 14
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1607C>T
  hgvsp: ENSP00000378993.2:p.Thr536Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1628C>T
  hgvsp: ENSP00000382243.3:p.Thr543Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1487C>T
  hgvsp: ENSP00000450741.1:p.Thr496Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1607C>T
  hgvsp: ENSP00000340391.3:p.Thr536Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.843C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.529C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.126C>T
  hgvsp: ENSP00000451134.1:p.Thr43Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1628C>T
  hgvsp: ENSP00000342858.4:p.Thr543Ile
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2811C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1628C>T
  hgvsp: ENSP00000451084.1:p.Thr543Ile
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35573
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6032
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr543Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

14-53327183-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327183
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327183
    reference: chr 14
allele count: 5
allele frequency: 4.196250230793762e-5
allele num: 119154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603A>G
  hgvsp: ENSP00000378993.2:p.Ile535Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624A>G
  hgvsp: ENSP00000382243.3:p.Ile542Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483A>G
  hgvsp: ENSP00000450741.1:p.Ile495Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2807A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624A>G
  hgvsp: ENSP00000451084.1:p.Ile542Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624A>G
  hgvsp: ENSP00000342858.4:p.Ile542Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603A>G
  hgvsp: ENSP00000340391.3:p.Ile535Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.839A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122A>G
  hgvsp: ENSP00000451134.1:p.Ile42Val
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18962
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile542Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/14-53327189-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327189
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327189
    reference: chr 14
allele count: 1
allele frequency: 8.44409166905916e-6
allele num: 118426
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.833G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-6G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2801G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21180
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6031
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1624-6G>T
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

14-53327192-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327192
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327192
    reference: chr 14
allele count: 1
allele frequency: 8.443521286117163e-6
allele num: 118434
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2798C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.830C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-9C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ

14-53327199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327199
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327199
    reference: chr 14
allele count: 14
allele frequency: 1.187265727030648e-4
allele num: 117918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2791G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.823G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-16G>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-16G>A
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6468
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20001
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/14-53327202-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327202
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327202
    reference: chr 14
allele count: 1
allele frequency: 8.497620666213461e-6
allele num: 117680
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2788G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.820G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-19G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-19G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19327
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5732
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

14-53327205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327205
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327205
    reference: chr 14
allele count: 6
allele frequency: 5.109078833086395e-5
allele num: 117438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.817G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2785G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-22G>C
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-22G>C
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18811
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2198
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

14-53327213-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327213
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327213
    reference: chr 14
allele count: 11
allele frequency: 9.408786095524839e-5
allele num: 116912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2777A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-30A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.809A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-30A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12766
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7039
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15800
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5713
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/14-53327219-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327219
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327219
    reference: chr 14
allele count: 1
allele frequency: 8.582806921175501e-6
allele num: 116512
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.803T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2771T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-36T>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-36T>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

14-53327231-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327231
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327231
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 114468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1624-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1483-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1624-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.525-48A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2759A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.791A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1624-48A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9186
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2976
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5574
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

14-53327688-TTTTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327688
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327684
    reference: chr 14
allele count: 1
allele frequency: 5.011024253357386e-5
allele num: 19956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.524+40_524+43delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1623+40_1623+43delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1623+40_1623+43delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-509_1603-506delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2298_2301delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-509_122-506delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.330_333delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1482+40_1482+43delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-509_1603-506delTAAA
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1623+40_1623+43delTAAA
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5019
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: TTTTA
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

14-53327716-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327716
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327716
    reference: chr 14
allele count: 5
allele frequency: 2.511048613901165e-4
allele num: 19912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2274T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1623+16T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-533T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.524+16T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.306T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1623+16T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-533T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-533T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1623+16T>A
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1482+16T>A
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/14-53327731-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327731
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327731
    reference: chr 14
allele count: 1
allele frequency: 5.025125628140704e-5
allele num: 19900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-548G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1623+1G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1482+1G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1623+1G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-548G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1623+1G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2259G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.291G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-548G>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.524+1G>T
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1623+1G>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

14-53327743-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327743
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327743
    reference: chr 14
allele count: 9
allele frequency: 4.532178467116527e-4
allele num: 19858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-560A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1612A>G
  hgvsp: ENSP00000342858.4:p.Ile538Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.279A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2247A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1471A>G
  hgvsp: ENSP00000450741.1:p.Ile491Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.513A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1612A>G
  hgvsp: ENSP00000382243.3:p.Ile538Val
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-560A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-560A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1612A>G
  hgvsp: ENSP00000451084.1:p.Ile538Val
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5016
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile538Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

14-53327750-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327750
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327750
    reference: chr 14
allele count: 6
allele frequency: 3.027245206861756e-4
allele num: 19820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.506A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1605A>G
  hgvsp: ENST00000399304.3:c.1605A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1464A>G
  hgvsp: ENST00000554152.1:c.1464A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1605A>G
  hgvsp: ENST00000343279.4:c.1605A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2240A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.272A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1605A>G
  hgvsp: ENST00000553373.1:c.1605A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-567A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-567A>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-567A>G
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1605A>G
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

14-53327756-T-TAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327756
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327759
    reference: chr 14
allele count: 8
allele frequency: 4.040812203252854e-4
allele num: 19798
alternate allele: TAGA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1462-7_1462-5dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.263_265dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1603-7_1603-5dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-576_1603-574dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1603-7_1603-5dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.504-7_504-5dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2231_2233dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1603-7_1603-5dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-576_1603-574dupTCT
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-576_122-574dupTCT
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 8.25e1
  variant carriers: 0
hgvs: c.1603-7_1603-5dupTCT
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

14-53327758-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327758
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327758
    reference: chr 14
allele count: 1
allele frequency: 5.051525560719337e-5
allele num: 19796
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.504-6C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1603-6C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1462-6C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1603-6C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2232C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-575C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-575C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.264C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1603-6C>G
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-575C>G
  variant of: http://identifiers.org/hgnc/15767
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1603-6C>G
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

14-53327761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 53327761
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 53327761
    reference: chr 14
allele count: 1
allele frequency: 5.057657293141817e-5
allele num: 19772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000340391
  ensembl transcript: ENST00000341590
  gene symbol: FERMT2
  hgvsc: ENST00000341590.3:c.1603-578C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000555546
  gene symbol: FERMT2
  hgvsc: ENST00000555546.1:n.261C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000450741
  ensembl transcript: ENST00000554152
  gene symbol: FERMT2
  hgvsc: ENST00000554152.1:c.1462-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451134
  ensembl transcript: ENST00000553663
  gene symbol: FERMT2
  hgvsc: ENST00000553663.1:c.122-578C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000557255
  gene symbol: FERMT2
  hgvsc: ENST00000557255.1:n.2229C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl transcript: ENST00000553768
  gene symbol: FERMT2
  hgvsc: ENST00000553768.1:n.504-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000378993
  ensembl transcript: ENST00000395631
  gene symbol: FERMT2
  hgvsc: ENST00000395631.2:c.1603-578C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000382243
  ensembl transcript: ENST00000399304
  gene symbol: FERMT2
  hgvsc: ENST00000399304.3:c.1603-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000342858
  ensembl transcript: ENST00000343279
  gene symbol: FERMT2
  hgvsc: ENST00000343279.4:c.1603-9C>T
  variant of: http://identifiers.org/hgnc/15767
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000073712
  ensembl protein: ENSP00000451084
  ensembl transcript: ENST00000553373
  gene symbol: FERMT2
  hgvsc: ENST00000553373.1:c.1603-9C>T
  variant of: http://identifiers.org/hgnc/15767
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6289
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39844
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821493624772313e-4
allele num: 16470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.66e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.085e0

FS
type: SiteQuality
SIO_000300: 7.988e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 2.00975e6

GenotypeQuality
all individuals: 7971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6276
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1926
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38785
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224289911851126e-4
allele num: 16336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.526798647996137e-5
allele num: 66272
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.93050193050193e-4
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

QD
type: SiteQuality
SIO_000300: 1.458e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

DP
type: SiteQuality
SIO_000300: 1.989527e6

FS
type: SiteQuality
SIO_000300: 6.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6267
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512767759893501e-5
allele num: 66104
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.977775e6

MQ
type: SiteQuality
SIO_000300: 5.997e1

FS
type: SiteQuality
SIO_000300: 1.0212e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.17e-1

QD
type: SiteQuality
SIO_000300: 1.643e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.141e0

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

GenotypeQuality
all individuals: 1052
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37180
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6267
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1896
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7670
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516162290011523e-5
allele num: 65956
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8542
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QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

FS
type: SiteQuality
SIO_000300: 5.304e0

DP
type: SiteQuality
SIO_000300: 1.966519e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -2.748e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.765e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65362
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.756567425569177e-5
allele num: 11420
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15964
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

DP
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FS
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BaseQRankSum
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SIO_000300: -1.83e0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

ClippingRankSum
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SIO_000300: 5.7e-2

MQ
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SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.53955106690889e-5
allele num: 64954
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8344
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 3.949e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
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SIO_000300: -2.082e0

QD
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SIO_000300: 1.012e1

DP
type: SiteQuality
SIO_000300: 1.797814e6

VQSLOD
type: SiteQuality
SIO_000300: -3.146e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53955106690889e-5
allele num: 64954
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

FS
type: SiteQuality
SIO_000300: 3.949e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

QD
type: SiteQuality
SIO_000300: 1.012e1

BaseQRankSum
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SIO_000300: -2.082e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.146e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

DP
type: SiteQuality
SIO_000300: 1.797814e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15806
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.798157946306095e-5
allele num: 10206
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
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SIO_000300: -2.188e0

MQ
type: SiteQuality
SIO_000300: 5.568e1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.286e0

QD
type: SiteQuality
SIO_000300: 8.74e0

MQRankSum
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SIO_000300: -1.937e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.714428e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

South Asian
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allele frequency: 6.333122229259025e-5
allele num: 15790
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64568
num of homozygotes: 0

African
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allele frequency: 9.803921568627451e-5
allele num: 10200
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
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FS
type: SiteQuality
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MQRankSum
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 3.92156862745098e-4
allele num: 10200
num of homozygotes: 0

European (Finnish)
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allele count: 0
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allele num: 6540
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64510
num of homozygotes: 0

Latino
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Other
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East Asian
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South Asian
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MQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Finnish)
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African
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allele count: 1
allele frequency: 9.803921568627451e-5
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64510
num of homozygotes: 0

Latino
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Other
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num of homozygotes: 0

South Asian
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MQ
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FS
type: SiteQuality
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BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8283
bin: 2.25e1
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GenotypeQuality
all individuals: 670
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6182
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 774
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11242
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.215362177929023e-4
allele num: 8228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15616
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.455e0

MQ
type: SiteQuality
SIO_000300: 5.685e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.320000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.427e0

MQRankSum
type: SiteQuality
SIO_000300: -8.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.647427e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.37e-1

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

GenotypeQuality
all individuals: 3520
bin: 3.75e1
variant carriers: 3395

GenotypeQuality
all individuals: 1665
bin: 2.25e1
variant carriers: 1133

GenotypeQuality
all individuals: 2250
bin: 5.75e1
variant carriers: 2214

GenotypeQuality
all individuals: 20798
bin: 9.75e1
variant carriers: 20414

GenotypeQuality
all individuals: 1548
bin: 7.25e1
variant carriers: 1510

GenotypeQuality
all individuals: 2193
bin: 4.25e1
variant carriers: 2148

GenotypeQuality
all individuals: 376
bin: 2.5e0
variant carriers: 117

GenotypeQuality
all individuals: 1122
bin: 2.75e1
variant carriers: 946

GenotypeQuality
all individuals: 2440
bin: 7.75e1
variant carriers: 2389

GenotypeQuality
all individuals: 4555
bin: 5.25e1
variant carriers: 4501

GenotypeQuality
all individuals: 4730
bin: 6.25e1
variant carriers: 4042

GenotypeQuality
all individuals: 3410
bin: 6.75e1
variant carriers: 3274

GenotypeQuality
all individuals: 2830
bin: 3.25e1
variant carriers: 2604

GenotypeQuality
all individuals: 578
bin: 1.75e1
variant carriers: 549

GenotypeQuality
all individuals: 1789
bin: 8.25e1
variant carriers: 1752

GenotypeQuality
all individuals: 1145
bin: 9.25e1
variant carriers: 1120

Other
type: Population
allele count: 743
allele frequency: 8.65967365967366e-1
allele num: 858
num of homozygotes: 319

Latino
type: Population
allele count: 8855
allele frequency: 8.16580597565474e-1
allele num: 10844
num of homozygotes: 3577

European (Non-Finnish)
type: Population
allele count: 56240
allele frequency: 9.016866542679407e-1
allele num: 62372
num of homozygotes: 25341

East Asian
type: Population
allele count: 5938
allele frequency: 7.45605223505776e-1
allele num: 7964
num of homozygotes: 2189

European (Finnish)
type: Population
allele count: 5665
allele frequency: 8.772065655001549e-1
allele num: 6458
num of homozygotes: 2480

South Asian
type: Population
allele count: 13251
allele frequency: 8.6812106918239e-1
allele num: 15264
num of homozygotes: 5762

African
type: Population
allele count: 4407
allele frequency: 4.399081653024556e-1
allele num: 10018
num of homozygotes: 963

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

QD
type: SiteQuality
SIO_000300: 3.073e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e-1

DP
type: SiteQuality
SIO_000300: 1.783367e6

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.352e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 1.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

GenotypeQuality
all individuals: 5171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
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variant carriers: 0

GenotypeQuality
all individuals: 431
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GenotypeQuality
all individuals: 572
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1455
bin: 7.5e0
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GenotypeQuality
all individuals: 298
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 632
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variant carriers: 0

GenotypeQuality
all individuals: 10984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
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variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9018
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.094240837696335e-4
allele num: 9550
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.288e0

DP
type: SiteQuality
SIO_000300: 1.295611e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 752
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
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variant carriers: 0

GenotypeQuality
all individuals: 1486
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variant carriers: 0

GenotypeQuality
all individuals: 417
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variant carriers: 0

GenotypeQuality
all individuals: 821
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variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 633
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variant carriers: 0

GenotypeQuality
all individuals: 5396
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variant carriers: 0

GenotypeQuality
all individuals: 21886
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variant carriers: 0

GenotypeQuality
all individuals: 526
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variant carriers: 0

GenotypeQuality
all individuals: 510
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variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10048
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6593
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.119820828667413e-4
allele num: 8930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6890
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.317e0

MQRankSum
type: SiteQuality
SIO_000300: -1.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

DP
type: SiteQuality
SIO_000300: 1.273972e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

MQ
type: SiteQuality
SIO_000300: 5.844e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

GenotypeQuality
all individuals: 1007
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5729
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
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variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 7662
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7285
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
all individuals: 460
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variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4759
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.917727717923604e-5
allele num: 51050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.678e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.424e0

QD
type: SiteQuality
SIO_000300: 5.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.61e-1

DP
type: SiteQuality
SIO_000300: 1.234128e6

VQSLOD
type: SiteQuality
SIO_000300: 9.360000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeQuality
all individuals: 5943
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4759
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 379
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variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 4.25e1
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GenotypeQuality
all individuals: 1481
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 5576
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GenotypeQuality
all individuals: 474
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variant carriers: 0

GenotypeQuality
all individuals: 167
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GenotypeQuality
all individuals: 20492
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GenotypeQuality
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GenotypeQuality
all individuals: 1105
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.037141703673799e-5
allele num: 49540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.047e0

DP
type: SiteQuality
SIO_000300: 1.199995e6

MQ
type: SiteQuality
SIO_000300: 5.662e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.457e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.89e-1

QD
type: SiteQuality
SIO_000300: 5.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

GenotypeQuality
all individuals: 370
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4758
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5987
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GenotypeQuality
all individuals: 218
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GenotypeQuality
all individuals: 1570
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 167
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 468
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GenotypeQuality
all individuals: 19772
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.109307581672488e-5
allele num: 48670
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.035e1

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.124e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.519e0

DP
type: SiteQuality
SIO_000300: 1.1847e6

GenotypeQuality
all individuals: 289
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 360
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GenotypeQuality
all individuals: 1294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4759
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.226908547469799e-5
allele num: 48178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.59e1

FS
type: SiteQuality
SIO_000300: 5.105e0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.25e-1

DP
type: SiteQuality
SIO_000300: 1.18045e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

GenotypeQuality
all individuals: 7865
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19437
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
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variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 7.5e0
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GenotypeQuality
all individuals: 1294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4492
bin: 6.25e1
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GenotypeQuality
all individuals: 1042
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GenotypeQuality
all individuals: 360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4943
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.151272364979867e-5
allele num: 48178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

DP
type: SiteQuality
SIO_000300: 1.18045e6

FS
type: SiteQuality
SIO_000300: 5.105e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.25e-1

GenotypeQuality
all individuals: 2255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2929
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5552
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.611e0

DP
type: SiteQuality
SIO_000300: 1.146516e6

GenotypeQuality
all individuals: 14868
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4757
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.250123756806624e-5
allele num: 44442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.031778786628147e-4
allele num: 9692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.145299e6

MQ
type: SiteQuality
SIO_000300: 5.808e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.955e0

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.063e1

VQSLOD
type: SiteQuality
SIO_000300: -6.623e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5753
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.250123756806624e-5
allele num: 44442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7314
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.145299e6

VQSLOD
type: SiteQuality
SIO_000300: -6.623e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQ
type: SiteQuality
SIO_000300: 5.808e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.955e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.063e1

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 7633
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43192
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.107252298263534e-4
allele num: 5874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.064e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 1.14349e6

QD
type: SiteQuality
SIO_000300: 6.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQ
type: SiteQuality
SIO_000300: 4.873e1

MQRankSum
type: SiteQuality
SIO_000300: -5.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525320317266626e-5
allele num: 65560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.659e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

DP
type: SiteQuality
SIO_000300: 1.680699e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.653e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
all individuals: 895
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 36

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 3.3921302578019e-3
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 7.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.710155e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.521e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522116350573838e-5
allele num: 65698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.751e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516852228255923e-5
allele num: 65926
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.912e0

DP
type: SiteQuality
SIO_000300: 1.757436e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.88e-1

QD
type: SiteQuality
SIO_000300: 1.432e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 1.463e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2297
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514921981517952e-5
allele num: 66010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.337e0

DP
type: SiteQuality
SIO_000300: 1.763214e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.571e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.814e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

QD
type: SiteQuality
SIO_000300: 1.401e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.366993505666624e-5
allele num: 15706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.489e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.74e-1

FS
type: SiteQuality
SIO_000300: 1.0006e1

DP
type: SiteQuality
SIO_000300: 1.772783e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510619656182966e-5
allele num: 66198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

FS
type: SiteQuality
SIO_000300: 3.549e0

QD
type: SiteQuality
SIO_000300: 1.287e1

DP
type: SiteQuality
SIO_000300: 1.776243e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 6074
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.305170239596469e-5
allele num: 15860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.849e0

QD
type: SiteQuality
SIO_000300: 1.239e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.780586e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 943
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.374e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

QD
type: SiteQuality
SIO_000300: 6.35e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 1.782569e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 73

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 73
allele frequency: 1.098372002046282e-3
allele num: 66462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.369e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.88e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

FS
type: SiteQuality
SIO_000300: 1.142e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 4.41e0

DP
type: SiteQuality
SIO_000300: 1.793875e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.357e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

DP
type: SiteQuality
SIO_000300: 1.798337e6

QD
type: SiteQuality
SIO_000300: 1.413e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7500
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.093102607847916e-5
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Other
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.501726986033939e-5
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European (Finnish)
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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DP
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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FS
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MQRankSum
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MQ
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

South Asian
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African
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.368e0

QD
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SIO_000300: 6.6e0

MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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SIO_000300: 4.66e-1

InbreedingCoeff
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66586
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European (Finnish)
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South Asian
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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Other
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ClippingRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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InbreedingCoeff
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MQ
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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FS
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ReadPosRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

DP
type: SiteQuality
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.92e0

QD
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SIO_000300: 1.563e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
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SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

FS
type: SiteQuality
SIO_000300: 3.171e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
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SIO_000300: -6.21e-1

VQSLOD
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BaseQRankSum
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SIO_000300: -6.840000000000001e-1

MQ
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SIO_000300: 4.872e1

FS
type: SiteQuality
SIO_000300: 1.0583e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.662e1

DP
type: SiteQuality
SIO_000300: 1.798139e6

MQRankSum
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SIO_000300: -5.11e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.94e-1

BaseQRankSum
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SIO_000300: -1.173e0

VQSLOD
type: SiteQuality
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MQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 1.3032e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQ
type: SiteQuality
SIO_000300: 4.906e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.798378e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16086
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.788614e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.82e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.367e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.051e0

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.925e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.859e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2514
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.467929193932632e-4
allele num: 66322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.81653042688465e-3
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740038280842179e-4
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.307e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.785916e6

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.526525439072967e-5
allele num: 66276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15958
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.099e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.75e-1

InbreedingCoeff
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VQSLOD
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BaseQRankSum
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SIO_000300: -1.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

FS
type: SiteQuality
SIO_000300: 1.532e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 1.78172e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.719916288803627e-4
allele num: 11468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.117554527029071e-4
allele num: 66114
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

QD
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MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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DP
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66090
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
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allele count: 0
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African
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allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
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South Asian
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allele frequency: 1.908882667345381e-4
allele num: 15716
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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MQRankSum
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DP
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.413545407901488e-5
allele num: 15592
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.588865616367666e-5
allele num: 65886
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 888
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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allele num: 15096
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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FS
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.525087692542321e-5
allele num: 65570
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.4e-2

BaseQRankSum
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VQSLOD
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QD
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MQRankSum
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MQ
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SIO_000300: 5.957e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.518833535844471e-4
allele num: 6584
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 13
allele frequency: 1.989044952415925e-4
allele num: 65358
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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QD
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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FS
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 9.205560158335634e-5
allele num: 65178
num of homozygotes: 0

Latino
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South Asian
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African
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Other
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.829242450997704e-5
allele num: 11326
num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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Other
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FS
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MQ
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 1.543305142292734e-5
allele num: 64796
num of homozygotes: 0

Other
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 9.52e-1

MQ
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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FS
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BaseQRankSum
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QD
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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DP
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FS
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.017e0

QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 4.807692307692308e-3
allele num: 208
num of homozygotes: 0

FS
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QD
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BaseQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.324310650139134e-4
allele num: 7906
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 404
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

DP
type: SiteQuality
SIO_000300: 5.30456e5

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.16e-2

QD
type: SiteQuality
SIO_000300: 1.078e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.265182186234818e-4
allele num: 7904
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Latino
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Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 250
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East Asian
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allele frequency: 0.0e0
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African
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
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MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.285714285714286e-3
allele num: 2100
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East Asian
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Latino
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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MQ
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SIO_000300: 5.981e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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South Asian
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allele frequency: 7.598784194528875e-4
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European (Non-Finnish)
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Other
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European (Finnish)
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InbreedingCoeff
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QD
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ClippingRankSum
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DP
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FS
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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African
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East Asian
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South Asian
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allele frequency: 1.013427919939194e-3
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European (Non-Finnish)
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European (Finnish)
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Latino
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DP
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 685
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1675
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.200192030724916e-4
allele num: 8332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.681e0

MQ
type: SiteQuality
SIO_000300: 5.51e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.36e-2

QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 5.24884e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0