http://identifiers.org/exac.variant/10-124009110-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009110
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009110
    reference: chr 10
allele count: 2
allele frequency: 1.682227268904029e-5
allele num: 118890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8493C>A
  hgvsp: ENST00000515273.1:c.8493C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+501C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2865C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8712C>A
  hgvsp: ENST00000369005.1:c.8712C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1581C>A
  hgvsp: ENST00000369000.1:c.1581C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2490C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3150C>A
  hgvsp: ENST00000358010.1:c.3150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2982C>A
  hgvsp: ENST00000368999.1:c.2982C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8712C>A
  hgvsp: ENST00000334433.3:c.8712C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1593C>A
  hgvsp: ENST00000369001.1:c.1593C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2946C>A
  hgvsp: ENST00000260733.3:c.2946C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3150C>A
  hgvsp: ENST00000513429.1:c.3150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8346C>A
  hgvsp: ENST00000515603.1:c.8346C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8493C>A
  hgvsp: ENST00000453444.2:c.8493C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2856C>A
  hgvsp: ENST00000360561.3:c.2856C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2892C>A
  hgvsp: ENST00000369004.3:c.2892C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2904Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

10-124009110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009110
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009110
    reference: chr 10
allele count: 1
allele frequency: 8.411136344520145e-6
allele num: 118890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1593C>T
  hgvsp: ENST00000369001.1:c.1593C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2856C>T
  hgvsp: ENST00000360561.3:c.2856C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3150C>T
  hgvsp: ENST00000513429.1:c.3150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8712C>T
  hgvsp: ENST00000369005.1:c.8712C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3150C>T
  hgvsp: ENST00000358010.1:c.3150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8493C>T
  hgvsp: ENST00000453444.2:c.8493C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2982C>T
  hgvsp: ENST00000368999.1:c.2982C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+501C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8493C>T
  hgvsp: ENST00000515273.1:c.8493C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8712C>T
  hgvsp: ENST00000334433.3:c.8712C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2892C>T
  hgvsp: ENST00000369004.3:c.2892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8346C>T
  hgvsp: ENST00000515603.1:c.8346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2946C>T
  hgvsp: ENST00000260733.3:c.2946C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2865C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2490C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1581C>T
  hgvsp: ENST00000369000.1:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2904Ala
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP

10-124009111-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009111
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009111
    reference: chr 10
allele count: 3
allele frequency: 2.527678074920378e-5
allele num: 118686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2857G>A
  hgvsp: ENSP00000353763.3:p.Ala953Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8347G>A
  hgvsp: ENSP00000427618.1:p.Ala2783Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3151G>A
  hgvsp: ENSP00000350701.1:p.Ala1051Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8713G>A
  hgvsp: ENSP00000358001.1:p.Ala2905Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8713G>A
  hgvsp: ENSP00000334280.2:p.Ala2905Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+502G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2866G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8494G>A
  hgvsp: ENSP00000395048.2:p.Ala2832Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2893G>A
  hgvsp: ENSP00000422815.1:p.Ala965Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8494G>A
  hgvsp: ENSP00000424467.1:p.Ala2832Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2983G>A
  hgvsp: ENSP00000357995.1:p.Ala995Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1594G>A
  hgvsp: ENSP00000357997.1:p.Ala532Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2947G>A
  hgvsp: ENSP00000260733.3:p.Ala983Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3151G>A
  hgvsp: ENSP00000425062.1:p.Ala1051Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1582G>A
  hgvsp: ENSP00000357996.1:p.Ala528Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2491G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2905Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

10-124009111-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009111
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009111
    reference: chr 10
allele count: 1
allele frequency: 8.425593583067927e-6
allele num: 118686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8713G>T
  hgvsp: ENSP00000334280.2:p.Ala2905Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1582G>T
  hgvsp: ENSP00000357996.1:p.Ala528Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2947G>T
  hgvsp: ENSP00000260733.3:p.Ala983Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+502G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2983G>T
  hgvsp: ENSP00000357995.1:p.Ala995Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1594G>T
  hgvsp: ENSP00000357997.1:p.Ala532Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8347G>T
  hgvsp: ENSP00000427618.1:p.Ala2783Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8713G>T
  hgvsp: ENSP00000358001.1:p.Ala2905Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8494G>T
  hgvsp: ENSP00000395048.2:p.Ala2832Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3151G>T
  hgvsp: ENSP00000350701.1:p.Ala1051Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3151G>T
  hgvsp: ENSP00000425062.1:p.Ala1051Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2857G>T
  hgvsp: ENSP00000353763.3:p.Ala953Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8494G>T
  hgvsp: ENSP00000424467.1:p.Ala2832Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2893G>T
  hgvsp: ENSP00000422815.1:p.Ala965Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2866G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2491G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2905Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-124009114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009114
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009114
    reference: chr 10
allele count: 1
allele frequency: 8.420627168311495e-6
allele num: 118756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8497C>T
  hgvsp: ENSP00000424467.1:p.His2833Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1597C>T
  hgvsp: ENSP00000357997.1:p.His533Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8716C>T
  hgvsp: ENSP00000334280.2:p.His2906Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8497C>T
  hgvsp: ENSP00000395048.2:p.His2833Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2950C>T
  hgvsp: ENSP00000260733.3:p.His984Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2860C>T
  hgvsp: ENSP00000353763.3:p.His954Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3154C>T
  hgvsp: ENSP00000350701.1:p.His1052Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2494C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2896C>T
  hgvsp: ENSP00000422815.1:p.His966Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2869C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1585C>T
  hgvsp: ENSP00000357996.1:p.His529Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8716C>T
  hgvsp: ENSP00000358001.1:p.His2906Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3154C>T
  hgvsp: ENSP00000425062.1:p.His1052Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2986C>T
  hgvsp: ENSP00000357995.1:p.His996Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+505C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8350C>T
  hgvsp: ENSP00000427618.1:p.His2784Tyr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His2906Tyr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-124009122-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009122
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009122
    reference: chr 10
allele count: 1
allele frequency: 8.441810599537389e-6
allele num: 118458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2502C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8724C>A
  hgvsp: ENST00000369005.1:c.8724C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3162C>A
  hgvsp: ENST00000358010.1:c.3162C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8505C>A
  hgvsp: ENST00000515273.1:c.8505C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+513C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8358C>A
  hgvsp: ENST00000515603.1:c.8358C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1605C>A
  hgvsp: ENST00000369001.1:c.1605C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3162C>A
  hgvsp: ENST00000513429.1:c.3162C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2868C>A
  hgvsp: ENST00000360561.3:c.2868C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8505C>A
  hgvsp: ENST00000453444.2:c.8505C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8724C>A
  hgvsp: ENST00000334433.3:c.8724C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2994C>A
  hgvsp: ENST00000368999.1:c.2994C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2958C>A
  hgvsp: ENST00000260733.3:c.2958C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1593C>A
  hgvsp: ENST00000369000.1:c.1593C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2904C>A
  hgvsp: ENST00000369004.3:c.2904C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2877C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2908Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

10-124009124-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009124
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009124
    reference: chr 10
allele count: 6270
allele frequency: 5.298561698243954e-2
allele num: 118334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2870G>C
  hgvsp: ENSP00000353763.3:p.Ser957Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3164G>C
  hgvsp: ENSP00000350701.1:p.Ser1055Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8360G>C
  hgvsp: ENSP00000427618.1:p.Ser2787Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8507G>C
  hgvsp: ENSP00000395048.2:p.Ser2836Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.2996G>C
  hgvsp: ENSP00000357995.1:p.Ser999Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8726G>C
  hgvsp: ENSP00000334280.2:p.Ser2909Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8507G>C
  hgvsp: ENSP00000424467.1:p.Ser2836Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8726G>C
  hgvsp: ENSP00000358001.1:p.Ser2909Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2906G>C
  hgvsp: ENSP00000422815.1:p.Ser969Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1607G>C
  hgvsp: ENSP00000357997.1:p.Ser536Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2960G>C
  hgvsp: ENSP00000260733.3:p.Ser987Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3164G>C
  hgvsp: ENSP00000425062.1:p.Ser1055Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1595G>C
  hgvsp: ENSP00000357996.1:p.Ser532Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2504G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2879G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+515G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 722
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 1.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 2.25e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.75e1
  variant carriers: 925
genotype quality: GenotypeQuality
hgvs: p.Ser2909Thr
num of homozygotes: 228
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum

10-124009131-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009131
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009131
    reference: chr 10
allele count: 1
allele frequency: 8.481188723411473e-6
allele num: 117908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2913G>A
  hgvsp: ENST00000369004.3:c.2913G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3003G>A
  hgvsp: ENST00000368999.1:c.3003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2877G>A
  hgvsp: ENST00000360561.3:c.2877G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8514G>A
  hgvsp: ENST00000515273.1:c.8514G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2967G>A
  hgvsp: ENST00000260733.3:c.2967G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8514G>A
  hgvsp: ENST00000453444.2:c.8514G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1614G>A
  hgvsp: ENST00000369001.1:c.1614G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3171G>A
  hgvsp: ENST00000358010.1:c.3171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1602G>A
  hgvsp: ENST00000369000.1:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3171G>A
  hgvsp: ENST00000513429.1:c.3171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2511G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8733G>A
  hgvsp: ENST00000369005.1:c.8733G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8733G>A
  hgvsp: ENST00000334433.3:c.8733G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+522G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2886G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8367G>A
  hgvsp: ENST00000515603.1:c.8367G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2911Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

10-124009145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009145
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009145
    reference: chr 10
allele count: 1
allele frequency: 8.551247627028784e-6
allele num: 116942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2981G>A
  hgvsp: ENSP00000260733.3:p.Arg994Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8528G>A
  hgvsp: ENSP00000424467.1:p.Arg2843Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8381G>A
  hgvsp: ENSP00000427618.1:p.Arg2794Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1616G>A
  hgvsp: ENSP00000357996.1:p.Arg539Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1628G>A
  hgvsp: ENSP00000357997.1:p.Arg543Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8528G>A
  hgvsp: ENSP00000395048.2:p.Arg2843Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8747G>A
  hgvsp: ENSP00000358001.1:p.Arg2916Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2891G>A
  hgvsp: ENSP00000353763.3:p.Arg964Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3185G>A
  hgvsp: ENSP00000350701.1:p.Arg1062Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8747G>A
  hgvsp: ENSP00000334280.2:p.Arg2916Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3017G>A
  hgvsp: ENSP00000357995.1:p.Arg1006Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3185G>A
  hgvsp: ENSP00000425062.1:p.Arg1062Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2927G>A
  hgvsp: ENSP00000422815.1:p.Arg976Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2525G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2900G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+536G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2916Gln
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-124009150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009150
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009150
    reference: chr 10
allele count: 1
allele frequency: 8.587966541282354e-6
allele num: 116442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3190G>A
  hgvsp: ENSP00000350701.1:p.Asp1064Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2905G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3022G>A
  hgvsp: ENSP00000357995.1:p.Asp1008Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2986G>A
  hgvsp: ENSP00000260733.3:p.Asp996Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+541G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8533G>A
  hgvsp: ENSP00000424467.1:p.Asp2845Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1633G>A
  hgvsp: ENSP00000357997.1:p.Asp545Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8533G>A
  hgvsp: ENSP00000395048.2:p.Asp2845Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3190G>A
  hgvsp: ENSP00000425062.1:p.Asp1064Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8752G>A
  hgvsp: ENSP00000358001.1:p.Asp2918Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2896G>A
  hgvsp: ENSP00000353763.3:p.Asp966Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8386G>A
  hgvsp: ENSP00000427618.1:p.Asp2796Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2932G>A
  hgvsp: ENSP00000422815.1:p.Asp978Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1621G>A
  hgvsp: ENSP00000357996.1:p.Asp541Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2530G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8752G>A
  hgvsp: ENSP00000334280.2:p.Asp2918Asn
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18498
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp2918Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

10-124009152-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009152
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009152
    reference: chr 10
allele count: 1
allele frequency: 8.597565169543985e-6
allele num: 116312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8535C>G
  hgvsp: ENSP00000395048.2:p.Asp2845Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2532C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3024C>G
  hgvsp: ENSP00000357995.1:p.Asp1008Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1635C>G
  hgvsp: ENSP00000357997.1:p.Asp545Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1623C>G
  hgvsp: ENSP00000357996.1:p.Asp541Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8754C>G
  hgvsp: ENSP00000358001.1:p.Asp2918Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8754C>G
  hgvsp: ENSP00000334280.2:p.Asp2918Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3192C>G
  hgvsp: ENSP00000425062.1:p.Asp1064Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2907C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3192C>G
  hgvsp: ENSP00000350701.1:p.Asp1064Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8388C>G
  hgvsp: ENSP00000427618.1:p.Asp2796Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+543C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8535C>G
  hgvsp: ENSP00000424467.1:p.Asp2845Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2898C>G
  hgvsp: ENSP00000353763.3:p.Asp966Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2988C>G
  hgvsp: ENSP00000260733.3:p.Asp996Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2934C>G
  hgvsp: ENSP00000422815.1:p.Asp978Glu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp2918Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

10-124009153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009153
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009153
    reference: chr 10
allele count: 1
allele frequency: 8.606444505645828e-6
allele num: 116192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3025G>A
  hgvsp: ENSP00000357995.1:p.Ala1009Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8755G>A
  hgvsp: ENSP00000334280.2:p.Ala2919Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1636G>A
  hgvsp: ENSP00000357997.1:p.Ala546Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3193G>A
  hgvsp: ENSP00000350701.1:p.Ala1065Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8536G>A
  hgvsp: ENSP00000424467.1:p.Ala2846Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1624G>A
  hgvsp: ENSP00000357996.1:p.Ala542Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2899G>A
  hgvsp: ENSP00000353763.3:p.Ala967Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8389G>A
  hgvsp: ENSP00000427618.1:p.Ala2797Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2989G>A
  hgvsp: ENSP00000260733.3:p.Ala997Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8536G>A
  hgvsp: ENSP00000395048.2:p.Ala2846Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2935G>A
  hgvsp: ENSP00000422815.1:p.Ala979Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2533G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8755G>A
  hgvsp: ENSP00000358001.1:p.Ala2919Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+544G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2908G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3193G>A
  hgvsp: ENSP00000425062.1:p.Ala1065Thr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2919Thr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

10-124009158-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009158
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009158
    reference: chr 10
allele count: 1
allele frequency: 8.653513326410523e-6
allele num: 115560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3030G>A
  hgvsp: ENST00000368999.1:c.3030G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8760G>A
  hgvsp: ENST00000369005.1:c.8760G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2538G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.2994G>A
  hgvsp: ENST00000260733.3:c.2994G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1641G>A
  hgvsp: ENST00000369001.1:c.1641G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3198G>A
  hgvsp: ENST00000358010.1:c.3198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2904G>A
  hgvsp: ENST00000360561.3:c.2904G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3198G>A
  hgvsp: ENST00000513429.1:c.3198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8541G>A
  hgvsp: ENST00000515273.1:c.8541G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8394G>A
  hgvsp: ENST00000515603.1:c.8394G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2940G>A
  hgvsp: ENST00000369004.3:c.2940G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1629G>A
  hgvsp: ENST00000369000.1:c.1629G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8541G>A
  hgvsp: ENST00000453444.2:c.8541G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8760G>A
  hgvsp: ENST00000334433.3:c.8760G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+549G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2913G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu2920Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS

10-124009165-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009165
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009165
    reference: chr 10
allele count: 1
allele frequency: 8.737439930100481e-6
allele num: 114450
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8767A>G
  hgvsp: ENSP00000358001.1:p.Thr2923Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3037A>G
  hgvsp: ENSP00000357995.1:p.Thr1013Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8401A>G
  hgvsp: ENSP00000427618.1:p.Thr2801Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3001A>G
  hgvsp: ENSP00000260733.3:p.Thr1001Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2947A>G
  hgvsp: ENSP00000422815.1:p.Thr983Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8548A>G
  hgvsp: ENSP00000424467.1:p.Thr2850Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3205A>G
  hgvsp: ENSP00000350701.1:p.Thr1069Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1648A>G
  hgvsp: ENSP00000357997.1:p.Thr550Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1636A>G
  hgvsp: ENSP00000357996.1:p.Thr546Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3205A>G
  hgvsp: ENSP00000425062.1:p.Thr1069Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8767A>G
  hgvsp: ENSP00000334280.2:p.Thr2923Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2920A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2911A>G
  hgvsp: ENSP00000353763.3:p.Thr971Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+556A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8548A>G
  hgvsp: ENSP00000395048.2:p.Thr2850Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2545A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2923Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

10-124009166-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009166
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009166
    reference: chr 10
allele count: 1
allele frequency: 8.743551630672379e-6
allele num: 114370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3002C>T
  hgvsp: ENSP00000260733.3:p.Thr1001Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2912C>T
  hgvsp: ENSP00000353763.3:p.Thr971Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2948C>T
  hgvsp: ENSP00000422815.1:p.Thr983Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8549C>T
  hgvsp: ENSP00000395048.2:p.Thr2850Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3206C>T
  hgvsp: ENSP00000350701.1:p.Thr1069Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1649C>T
  hgvsp: ENSP00000357997.1:p.Thr550Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8768C>T
  hgvsp: ENSP00000358001.1:p.Thr2923Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8549C>T
  hgvsp: ENSP00000424467.1:p.Thr2850Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2921C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2546C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+557C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3206C>T
  hgvsp: ENSP00000425062.1:p.Thr1069Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8402C>T
  hgvsp: ENSP00000427618.1:p.Thr2801Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3038C>T
  hgvsp: ENSP00000357995.1:p.Thr1013Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1637C>T
  hgvsp: ENSP00000357996.1:p.Thr546Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8768C>T
  hgvsp: ENSP00000334280.2:p.Thr2923Met
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2923Met
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

10-124009167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009167
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009167
    reference: chr 10
allele count: 2
allele frequency: 1.751558887409795e-5
allele num: 114184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2913G>A
  hgvsp: ENST00000360561.3:c.2913G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2949G>A
  hgvsp: ENST00000369004.3:c.2949G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8550G>A
  hgvsp: ENST00000515273.1:c.8550G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1650G>A
  hgvsp: ENST00000369001.1:c.1650G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3039G>A
  hgvsp: ENST00000368999.1:c.3039G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3207G>A
  hgvsp: ENST00000358010.1:c.3207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+558G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2922G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2547G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8769G>A
  hgvsp: ENST00000334433.3:c.8769G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3003G>A
  hgvsp: ENST00000260733.3:c.3003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3207G>A
  hgvsp: ENST00000513429.1:c.3207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8403G>A
  hgvsp: ENST00000515603.1:c.8403G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8550G>A
  hgvsp: ENST00000453444.2:c.8550G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1638G>A
  hgvsp: ENST00000369000.1:c.1638G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8769G>A
  hgvsp: ENST00000369005.1:c.8769G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23208
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5436
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2923Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

10-124009184-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009184
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009183
    reference: chr 10
allele count: 1
allele frequency: 9.01648212933242e-6
allele num: 110908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+576delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+6delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+6delA
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5437
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.8781+6delA
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: TA
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

10-124009191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009191
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009191
    reference: chr 10
allele count: 1
allele frequency: 9.152312789441891e-6
allele num: 109262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+582G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+12G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+12G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-124009193-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009193
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009193
    reference: chr 10
allele count: 4
allele frequency: 3.681275193727107e-5
allele num: 108658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+584G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+14G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+14G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18081
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-124009196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009196
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009196
    reference: chr 10
allele count: 9
allele frequency: 8.358874338255782e-5
allele num: 107670
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+587G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+17G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+17G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14808
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16671
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10490
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

10-124009203-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009203
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009203
    reference: chr 10
allele count: 1
allele frequency: 9.464498665505687e-6
allele num: 105658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+594C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+24C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+24C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

10-124009207-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009207
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009207
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 104738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+598G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+28G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+28G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

10-124009209-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009209
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009209
    reference: chr 10
allele count: 2
allele frequency: 1.93191916850199e-5
allele num: 103524
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+600G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+30G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+30G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10346
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

10-124009213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009213
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009213
    reference: chr 10
allele count: 87
allele frequency: 8.6135202566235e-4
allele num: 101004
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+604C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+34C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+34C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12690
  bin: 1.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

10-124009214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009214
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009214
    reference: chr 10
allele count: 4
allele frequency: 3.964792641344857e-5
allele num: 100888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+605G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+35G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+35G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12571
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

10-124009229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009229
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009229
    reference: chr 10
allele count: 2
allele frequency: 2.098547804918996e-5
allele num: 95304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+620G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+50G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+50G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14895
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

10-124009229-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124009229
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124009229
    reference: chr 10
allele count: 2
allele frequency: 2.098547804918996e-5
allele num: 95304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2559+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8562+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2925+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3015+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8781+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3219+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.329+620G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2961+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8415+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8562+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2934+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1662+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1650+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3219+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8781+50G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3051+50G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

10-124013461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013461
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013461
    reference: chr 10
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-181C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-45C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-45C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

10-124013462-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013462
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013462
    reference: chr 10
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-180C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-44C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-44C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

10-124013464-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013464
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013464
    reference: chr 10
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-178G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-42G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-42G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

10-124013464-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013464
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013464
    reference: chr 10
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-178G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-42G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-42G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

10-124013481-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013481
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013481
    reference: chr 10
allele count: 1
allele frequency: 8.256411103221652e-6
allele num: 121118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-161A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-25A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-25A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

10-124013484-TCTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013484
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013480
    reference: chr 10
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-18_3016-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-18_8563-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-18_8782-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-18_2935-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-18_3220-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-18_1663-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-154_330-151delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-18_8782-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-18_3052-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-18_2560-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-18_8563-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-18_2926-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-18_2962-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-18_1651-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-18_8416-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-18_3220-15delCCTT
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: TCTTC
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

10-124013485-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013485
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013485
    reference: chr 10
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-21C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-157C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-21C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-124013486-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013486
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013486
    reference: chr 10
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-156T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-20T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-20T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

10-124013491-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013491
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013491
    reference: chr 10
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2962-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3016-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3220-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8563-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8416-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3220-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8782-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2935-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8563-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1663-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2560-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-151T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1651-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8782-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3052-15T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2926-15T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

10-124013528-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013528
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013528
    reference: chr 10
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1685C>G
  hgvsp: ENSP00000357997.1:p.Thr562Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8804C>G
  hgvsp: ENSP00000334280.2:p.Thr2935Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2984C>G
  hgvsp: ENSP00000422815.1:p.Thr995Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3038C>G
  hgvsp: ENSP00000260733.3:p.Thr1013Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8438C>G
  hgvsp: ENSP00000427618.1:p.Thr2813Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2582C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2948C>G
  hgvsp: ENSP00000353763.3:p.Thr983Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3242C>G
  hgvsp: ENSP00000350701.1:p.Thr1081Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1673C>G
  hgvsp: ENSP00000357996.1:p.Thr558Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8804C>G
  hgvsp: ENSP00000358001.1:p.Thr2935Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2957C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8585C>G
  hgvsp: ENSP00000424467.1:p.Thr2862Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8585C>G
  hgvsp: ENSP00000395048.2:p.Thr2862Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3074C>G
  hgvsp: ENSP00000357995.1:p.Thr1025Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-114C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3242C>G
  hgvsp: ENSP00000425062.1:p.Thr1081Ser
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2935Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-124013541-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013541
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013541
    reference: chr 10
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3051C>T
  hgvsp: ENST00000260733.3:c.3051C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2970C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2961C>T
  hgvsp: ENST00000360561.3:c.2961C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1698C>T
  hgvsp: ENST00000369001.1:c.1698C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8451C>T
  hgvsp: ENST00000515603.1:c.8451C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8598C>T
  hgvsp: ENST00000515273.1:c.8598C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8817C>T
  hgvsp: ENST00000369005.1:c.8817C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2595C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3087C>T
  hgvsp: ENST00000368999.1:c.3087C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3255C>T
  hgvsp: ENST00000358010.1:c.3255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1686C>T
  hgvsp: ENST00000369000.1:c.1686C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8817C>T
  hgvsp: ENST00000334433.3:c.8817C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3255C>T
  hgvsp: ENST00000513429.1:c.3255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8598C>T
  hgvsp: ENST00000453444.2:c.8598C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-101C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.2997C>T
  hgvsp: ENST00000369004.3:c.2997C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp2939Asp
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

10-124013544-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013544
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013544
    reference: chr 10
allele count: 5
allele frequency: 4.119226903494752e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3054A>G
  hgvsp: ENST00000260733.3:c.3054A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8820A>G
  hgvsp: ENST00000334433.3:c.8820A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1701A>G
  hgvsp: ENST00000369001.1:c.1701A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8601A>G
  hgvsp: ENST00000453444.2:c.8601A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8820A>G
  hgvsp: ENST00000369005.1:c.8820A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8454A>G
  hgvsp: ENST00000515603.1:c.8454A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8601A>G
  hgvsp: ENST00000515273.1:c.8601A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2973A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2964A>G
  hgvsp: ENST00000360561.3:c.2964A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3258A>G
  hgvsp: ENST00000358010.1:c.3258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3090A>G
  hgvsp: ENST00000368999.1:c.3090A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3258A>G
  hgvsp: ENST00000513429.1:c.3258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.3000A>G
  hgvsp: ENST00000369004.3:c.3000A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1689A>G
  hgvsp: ENST00000369000.1:c.1689A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-98A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2598A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu2940Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

10-124013547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013547
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013547
    reference: chr 10
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3261G>A
  hgvsp: ENST00000513429.1:c.3261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-95G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2967G>A
  hgvsp: ENST00000360561.3:c.2967G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8604G>A
  hgvsp: ENST00000515273.1:c.8604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8823G>A
  hgvsp: ENST00000369005.1:c.8823G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3057G>A
  hgvsp: ENST00000260733.3:c.3057G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3261G>A
  hgvsp: ENST00000358010.1:c.3261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8457G>A
  hgvsp: ENST00000515603.1:c.8457G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8823G>A
  hgvsp: ENST00000334433.3:c.8823G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.3003G>A
  hgvsp: ENST00000369004.3:c.3003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8604G>A
  hgvsp: ENST00000453444.2:c.8604G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1704G>A
  hgvsp: ENST00000369001.1:c.1704G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2976G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1692G>A
  hgvsp: ENST00000369000.1:c.1692G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2601G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3093G>A
  hgvsp: ENST00000368999.1:c.3093G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu2941Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-124013554-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013554
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013554
    reference: chr 10
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8830A>C
  hgvsp: ENSP00000358001.1:p.Lys2944Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2974A>C
  hgvsp: ENSP00000353763.3:p.Lys992Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2983A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-88A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3064A>C
  hgvsp: ENSP00000260733.3:p.Lys1022Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1699A>C
  hgvsp: ENSP00000357996.1:p.Lys567Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.3010A>C
  hgvsp: ENSP00000422815.1:p.Lys1004Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8611A>C
  hgvsp: ENSP00000395048.2:p.Lys2871Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8830A>C
  hgvsp: ENSP00000334280.2:p.Lys2944Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8611A>C
  hgvsp: ENSP00000424467.1:p.Lys2871Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2608A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3100A>C
  hgvsp: ENSP00000357995.1:p.Lys1034Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3268A>C
  hgvsp: ENSP00000350701.1:p.Lys1090Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8464A>C
  hgvsp: ENSP00000427618.1:p.Lys2822Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3268A>C
  hgvsp: ENSP00000425062.1:p.Lys1090Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1711A>C
  hgvsp: ENSP00000357997.1:p.Lys571Gln
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys2944Gln
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

10-124013554-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013554
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013554
    reference: chr 10
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2974A>G
  hgvsp: ENSP00000353763.3:p.Lys992Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3268A>G
  hgvsp: ENSP00000350701.1:p.Lys1090Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1699A>G
  hgvsp: ENSP00000357996.1:p.Lys567Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8611A>G
  hgvsp: ENSP00000395048.2:p.Lys2871Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.3010A>G
  hgvsp: ENSP00000422815.1:p.Lys1004Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1711A>G
  hgvsp: ENSP00000357997.1:p.Lys571Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3064A>G
  hgvsp: ENSP00000260733.3:p.Lys1022Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8611A>G
  hgvsp: ENSP00000424467.1:p.Lys2871Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3100A>G
  hgvsp: ENSP00000357995.1:p.Lys1034Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-88A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8830A>G
  hgvsp: ENSP00000358001.1:p.Lys2944Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3268A>G
  hgvsp: ENSP00000425062.1:p.Lys1090Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2983A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8830A>G
  hgvsp: ENSP00000334280.2:p.Lys2944Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8464A>G
  hgvsp: ENSP00000427618.1:p.Lys2822Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2608A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys2944Glu
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-124013570-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013570
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013570
    reference: chr 10
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.1727A>C
  hgvsp: ENSP00000357997.1:p.Ter576SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.2999A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.8846A>C
  hgvsp: ENSP00000358001.1:p.Ter2949SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.8627A>C
  hgvsp: ENSP00000395048.2:p.Ter2876SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.3116A>C
  hgvsp: ENSP00000357995.1:p.Ter1039SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2624A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.3026A>C
  hgvsp: ENSP00000422815.1:p.Ter1009SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.8627A>C
  hgvsp: ENSP00000424467.1:p.Ter2876SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.8846A>C
  hgvsp: ENSP00000334280.2:p.Ter2949SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.8480A>C
  hgvsp: ENSP00000427618.1:p.Ter2827SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.2990A>C
  hgvsp: ENSP00000353763.3:p.Ter997SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.3284A>C
  hgvsp: ENSP00000350701.1:p.Ter1095SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.3080A>C
  hgvsp: ENSP00000260733.3:p.Ter1027SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.3284A>C
  hgvsp: ENSP00000425062.1:p.Ter1095SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.1715A>C
  hgvsp: ENSP00000357996.1:p.Ter572SerextTer2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-72A>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ter2949SerextTer2
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

10-124013574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013574
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013574
    reference: chr 10
allele count: 8
allele frequency: 6.59098024353672e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2628C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-68C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3003C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*3C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

10-124013580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013580
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013580
    reference: chr 10
allele count: 15
allele frequency: 1.235849522962084e-4
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2634C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3009C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-62C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-124013581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013581
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013581
    reference: chr 10
allele count: 9
allele frequency: 7.415097137772504e-5
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2635G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3010G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

10-124013595-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013595
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013595
    reference: chr 10
allele count: 2
allele frequency: 1.648261084555794e-5
allele num: 121340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2649T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*24T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3024T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-47T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-124013596-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013596
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013596
    reference: chr 10
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3025A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2650A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*25A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-46A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-124013604-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013604
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013604
    reference: chr 10
allele count: 32690
allele frequency: 2.698530625722305e-1
allele num: 121140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2658C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*33C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3033C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-38C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16755
  bin: 2.75e1
  variant carriers: 591
genotype depth: GenotypeDepth
  all individuals: 10261
  bin: 2.25e1
  variant carriers: 212
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 1340
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 6.25e1
  variant carriers: 2555
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 5.25e1
  variant carriers: 2661
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 4.75e1
  variant carriers: 2405
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 4500
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

10-124013605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013605
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013605
    reference: chr 10
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3034G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-37G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2659G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-124013610-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013610
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013610
    reference: chr 10
allele count: 2
allele frequency: 1.656369569178275e-5
allele num: 120746
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3039A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2664A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-32A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11359
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

10-124013617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013617
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013617
    reference: chr 10
allele count: 7
allele frequency: 5.830418124271198e-5
allele num: 120060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-25C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3046C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2671C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*46C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

10-124013620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013620
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013620
    reference: chr 10
allele count: 2
allele frequency: 1.670480931460167e-5
allele num: 119726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3049C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-22C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2674C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*49C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

10-124013623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013623
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013623
    reference: chr 10
allele count: 1
allele frequency: 8.371283150281276e-6
allele num: 119456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-19C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3052C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2677C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*52C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

10-124013625-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013625
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013625
    reference: chr 10
allele count: 9
allele frequency: 7.555660028879412e-5
allele num: 119116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-17C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2679C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3054C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10688
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-124013631-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013631
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013631
    reference: chr 10
allele count: 1
allele frequency: 8.468691248454463e-6
allele num: 118082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2685T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3060T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-11T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*60T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ

10-124013632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013632
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013632
    reference: chr 10
allele count: 1
allele frequency: 8.559005785887911e-6
allele num: 116836
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3061G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-10G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2686G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*61G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

10-124013638-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013638
    reference: chr 10
allele count: 1
allele frequency: 8.626192571122958e-6
allele num: 115926
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3067C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2692C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.330-4C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*67C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.330-4C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

10-124013654-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013654
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013654
    reference: chr 10
allele count: 1
allele frequency: 9.643015563827121e-6
allele num: 103702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.342G>A
  hgvsp: ENSP00000423764.1:p.Val115Ile
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2708G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3083G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val115Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-124013657-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013657
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013657
    reference: chr 10
allele count: 1
allele frequency: 9.97406742469579e-6
allele num: 100260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3086C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.345C>A
  hgvsp: ENSP00000423764.1:p.Leu116Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2711C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*86C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu116Met
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

10-124013657-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013657
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013657
    reference: chr 10
allele count: 3
allele frequency: 2.992220227408737e-5
allele num: 100260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.345C>G
  hgvsp: ENSP00000423764.1:p.Leu116Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3086C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2711C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*86C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu116Val
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

10-124013660-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013660
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013660
    reference: chr 10
allele count: 1
allele frequency: 1.075245693640997e-5
allele num: 93002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2714T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3089T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.348T>C
  hgvsp: ENSP00000423764.1:p.Phe117Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*89T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe117Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

10-124013662-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013662
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013662
    reference: chr 10
allele count: 1
allele frequency: 1.076101928374656e-5
allele num: 92928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.350T>C
  hgvsp: ENST00000490979.1:c.350T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2716T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3091T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*91T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe117Phe
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

10-124013665-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124013665
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 124013665
    reference: chr 10
allele count: 2
allele frequency: 2.256266780984183e-5
allele num: 88642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000423764
  ensembl transcript: ENST00000490979
  gene symbol: TACC2
  hgvsc: ENST00000490979.1:c.353A>G
  hgvsp: ENST00000490979.1:c.353A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000465600
  gene symbol: TACC2
  hgvsc: ENST00000465600.1:n.2719A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.3094A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.*94A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser118Ser
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 107
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1813
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1151
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25409
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16706
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1981
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 280
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35653
bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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QD
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InbreedingCoeff
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FS
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MQ
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DP
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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East Asian
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Latino
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DP
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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African
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East Asian
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Other
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VQSLOD
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BaseQRankSum
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MQ
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FS
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MQRankSum
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InbreedingCoeff
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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FS
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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East Asian
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BaseQRankSum
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MQ
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ReadPosRankSum
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QD
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FS
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.104e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

DP
type: SiteQuality
SIO_000300: 1.644568e6

GenotypeDepth
all individuals: 71
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variant carriers: 29

GenotypeDepth
all individuals: 48
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variant carriers: 0

GenotypeDepth
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variant carriers: 200

GenotypeDepth
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variant carriers: 557

GenotypeDepth
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variant carriers: 244

GenotypeDepth
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variant carriers: 904

GenotypeDepth
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variant carriers: 143

GenotypeDepth
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variant carriers: 65

GenotypeDepth
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variant carriers: 713

GenotypeDepth
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variant carriers: 32

GenotypeDepth
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variant carriers: 67

GenotypeDepth
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variant carriers: 286

GenotypeDepth
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variant carriers: 434

GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5915

GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 19

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 23

GenotypeQuality
all individuals: 525
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GenotypeQuality
all individuals: 1880
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variant carriers: 12

Latino
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allele count: 291
allele frequency: 2.555321390937829e-2
allele num: 11388
num of homozygotes: 2

African
type: Population
allele count: 102
allele frequency: 1.018370607028754e-2
allele num: 10016
num of homozygotes: 1

Other
type: Population
allele count: 54
allele frequency: 6.25e-2
allele num: 864
num of homozygotes: 4

South Asian
type: Population
allele count: 735
allele frequency: 4.532560434139122e-2
allele num: 16216
num of homozygotes: 26

European (Non-Finnish)
type: Population
allele count: 4827
allele frequency: 7.409965920604218e-2
allele num: 65142
num of homozygotes: 188

European (Finnish)
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allele count: 255
allele frequency: 4.13290113452188e-2
allele num: 6170
num of homozygotes: 7

East Asian
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allele count: 6
allele frequency: 7.027406886858749e-4
allele num: 8538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

DP
type: SiteQuality
SIO_000300: 1.692935e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 1.455e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.079e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540025256414205e-5
allele num: 64934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.64e0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.801e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.374e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.831e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.589579e6

FS
type: SiteQuality
SIO_000300: 1.264e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.62e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.236746912810279e-5
allele num: 16034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
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SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.28e-1

VQSLOD
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SIO_000300: -6.407e-1

MQ
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SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.564809e6

QD
type: SiteQuality
SIO_000300: 1.051e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37972
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.869966294128082e-5
allele num: 11274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.551527e6

MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
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QD
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MQ
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SIO_000300: 5.884e1

InbreedingCoeff
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SIO_000300: -1.1e-3

FS
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SIO_000300: 2.301e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.282196255811031e-5
allele num: 15918
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64168
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.1e-3

BaseQRankSum
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DP
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ClippingRankSum
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QD
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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QD
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MQRankSum
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VQSLOD
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MQ
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DP
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South Asian
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European (Finnish)
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African
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InbreedingCoeff
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VQSLOD
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MQ
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QD
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DP
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FS
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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MQRankSum
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VQSLOD
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DP
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QD
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ReadPosRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeQuality
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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VQSLOD
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DP
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European (Non-Finnish)
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60998
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.304056568663938e-5
allele num: 10748
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.443e0

MQRankSum
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SIO_000300: 5.73e-1

MQ
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ClippingRankSum
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SIO_000300: 6.7e-1

BaseQRankSum
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SIO_000300: -1.203e0

DP
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VQSLOD
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SIO_000300: -1.752e0

InbreedingCoeff
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SIO_000300: -2.6e-3

QD
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ReadPosRankSum
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SIO_000300: -1.203e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.589134517181169e-5
allele num: 60706
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 1.5e-1

MQ
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SIO_000300: 6.0e1

VQSLOD
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InbreedingCoeff
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SIO_000300: -2.9e-3

FS
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SIO_000300: 2.205e0

MQRankSum
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SIO_000300: -2.78e-1

QD
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DP
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ReadPosRankSum
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SIO_000300: 2.98e-1

BaseQRankSum
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SIO_000300: -1.155e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.492569614774203e-4
allele num: 13862
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60210
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

BaseQRankSum
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SIO_000300: -1.299e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

FS
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SIO_000300: 0.0e0

QD
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SIO_000300: 1.194e1

ClippingRankSum
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SIO_000300: -4.28e-1

VQSLOD
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SIO_000300: 2.55e0

DP
type: SiteQuality
SIO_000300: 1.288461e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.685658418178141e-5
allele num: 59324
num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
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VQSLOD
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MQ
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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East Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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DP
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MQ
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FS
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.924557351809084e-4
allele num: 10392
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East Asian
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European (Finnish)
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African
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Other
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South Asian
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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FS
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 24

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 50
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 9.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 78

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 677
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 5590
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.150895140664962e-3
allele num: 7820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4722
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.943485086342229e-4
allele num: 10192
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.20598166907863e-4
allele num: 8292
num of homozygotes: 0

South Asian
type: Population
allele count: 72
allele frequency: 6.002000666888963e-3
allele num: 11996
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.490766921492652e-5
allele num: 57294
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.096983e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

QD
type: SiteQuality
SIO_000300: 1.162e1

FS
type: SiteQuality
SIO_000300: 6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

GenotypeDepth
all individuals: 79
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 228
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variant carriers: 0

GenotypeDepth
all individuals: 5742
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 8008
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1886
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 666
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12018
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.748618591312863e-5
allele num: 57188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4732
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.852080123266564e-4
allele num: 7788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.231e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.045e1

DP
type: SiteQuality
SIO_000300: 1.094226e6

FS
type: SiteQuality
SIO_000300: 4.866e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 17734
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 79
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variant carriers: 0

GenotypeDepth
all individuals: 125
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 134
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GenotypeQuality
all individuals: 5663
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 469
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GenotypeQuality
all individuals: 6855
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3370
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 1718
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variant carriers: 0

GenotypeQuality
all individuals: 2798
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variant carriers: 0

GenotypeQuality
all individuals: 564
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4062
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variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.281394156842645e-4
allele num: 7804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.8327102118613e-5
allele num: 54564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10730
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 1.018845e6

FS
type: SiteQuality
SIO_000300: 6.995e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.255e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

QD
type: SiteQuality
SIO_000300: 9.24e0

GenotypeDepth
all individuals: 515
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1643
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 306
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variant carriers: 0

GenotypeDepth
all individuals: 17734
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variant carriers: 2

GenotypeDepth
all individuals: 50
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GenotypeDepth
all individuals: 271
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GenotypeDepth
all individuals: 1441
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GenotypeDepth
all individuals: 79
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variant carriers: 0

GenotypeDepth
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 564
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variant carriers: 0

GenotypeQuality
all individuals: 5663
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3370
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8589
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variant carriers: 0

GenotypeQuality
all individuals: 1718
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variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
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variant carriers: 0

GenotypeQuality
all individuals: 2954
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6855
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variant carriers: 0

GenotypeQuality
all individuals: 134
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variant carriers: 1

GenotypeQuality
all individuals: 4062
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4439
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 2
allele frequency: 2.56278831368529e-4
allele num: 7804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.255e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 6.995e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 1.018845e6

QD
type: SiteQuality
SIO_000300: 9.24e0

GenotypeDepth
all individuals: 247
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 162
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variant carriers: 0

GenotypeDepth
all individuals: 944
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variant carriers: 0

GenotypeDepth
all individuals: 348
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variant carriers: 0

GenotypeDepth
all individuals: 2849
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variant carriers: 0

GenotypeDepth
all individuals: 12
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GenotypeDepth
all individuals: 124
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GenotypeDepth
all individuals: 4468
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GenotypeDepth
all individuals: 202
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GenotypeDepth
all individuals: 344
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GenotypeQuality
all individuals: 1263
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GenotypeQuality
all individuals: 10381
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GenotypeQuality
all individuals: 397
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 31
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2253
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variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0960741282614e-5
allele num: 16404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.105e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

QD
type: SiteQuality
SIO_000300: 6.78e0

DP
type: SiteQuality
SIO_000300: 1.813732e6

VQSLOD
type: SiteQuality
SIO_000300: -7.917999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

GenotypeDepth
all individuals: 259
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 558
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variant carriers: 0

GenotypeDepth
all individuals: 348
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variant carriers: 0

GenotypeDepth
all individuals: 344
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GenotypeDepth
all individuals: 247
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GenotypeDepth
all individuals: 13717
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variant carriers: 0

GenotypeDepth
all individuals: 1634
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variant carriers: 0

GenotypeDepth
all individuals: 124
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GenotypeDepth
all individuals: 106
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GenotypeDepth
all individuals: 9940
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 2935
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GenotypeQuality
all individuals: 27886
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GenotypeQuality
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GenotypeQuality
all individuals: 314
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1206
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variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.123e0

QD
type: SiteQuality
SIO_000300: 1.487e1

DP
type: SiteQuality
SIO_000300: 1.816614e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.907e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeDepth
all individuals: 8
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variant carriers: 0

GenotypeDepth
all individuals: 14213
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variant carriers: 0

GenotypeDepth
all individuals: 2047
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GenotypeDepth
all individuals: 1326
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GenotypeDepth
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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QD
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MQ
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FS
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DP
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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East Asian
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South Asian
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European (Non-Finnish)
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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QD
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DP
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FS
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MQ
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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Latino
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European (Non-Finnish)
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VQSLOD
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MQ
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ClippingRankSum
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FS
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DP
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MQRankSum
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QD
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East Asian
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Latino
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African
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MQ
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ClippingRankSum
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FS
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DP
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66636
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

East Asian
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South Asian
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele num: 10406
num of homozygotes: 0

Other
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Other
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African
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East Asian
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Latino
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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African
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European (Finnish)
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Latino
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Other
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South Asian
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InbreedingCoeff
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FS
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QD
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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DP
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MQRankSum
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QD
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MQ
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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MQRankSum
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MQ
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.727712508638562e-4
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num of homozygotes: 0

QD
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SIO_000300: 1.605e1

InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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FS
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SIO_000300: 5.81e-1

ClippingRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66722
num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66718
num of homozygotes: 0

Latino
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allele num: 11576
num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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African
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Other
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MQRankSum
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FS
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BaseQRankSum
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MQ
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VQSLOD
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DP
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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Other
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European (Finnish)
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Latino
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South Asian
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.517e0

VQSLOD
type: SiteQuality
SIO_000300: -4.62e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.407e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

DP
type: SiteQuality
SIO_000300: 1.861659e6

GenotypeDepth
all individuals: 2882
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1647
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 249
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10486
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 345
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 206
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 560
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6707
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10496
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31830
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

DP
type: SiteQuality
SIO_000300: 1.861609e6

QD
type: SiteQuality
SIO_000300: 1.315e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 6.591e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.03e-1

GenotypeDepth
all individuals: 2040
bin: 7.25e1
variant carriers: 2030

GenotypeDepth
all individuals: 6076
bin: 3.25e1
variant carriers: 1019

GenotypeDepth
all individuals: 957
bin: 8.75e1
variant carriers: 954

GenotypeDepth
all individuals: 2804
bin: 5.75e1
variant carriers: 2774

GenotypeDepth
all individuals: 2410
bin: 6.75e1
variant carriers: 2398

GenotypeDepth
all individuals: 2198
bin: 3.75e1
variant carriers: 1545

GenotypeDepth
all individuals: 763
bin: 9.25e1
variant carriers: 760

GenotypeDepth
all individuals: 1676
bin: 7.75e1
variant carriers: 1671

GenotypeDepth
all individuals: 2288
bin: 4.25e1
variant carriers: 2108

GenotypeDepth
all individuals: 3109
bin: 9.75e1
variant carriers: 3107

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 26231
bin: 6.25e1
variant carriers: 17

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 139
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 8

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 56

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 39

GenotypeQuality
all individuals: 123
bin: 9.25e1
variant carriers: 77

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 671
bin: 7.75e1
variant carriers: 38

GenotypeQuality
all individuals: 795
bin: 7.25e1
variant carriers: 17

GenotypeQuality
all individuals: 27928
bin: 9.75e1
variant carriers: 27857

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4018
bin: 6.75e1
variant carriers: 26

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 19

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 9

East Asian
type: Population
allele count: 2312
allele frequency: 2.680268954324136e-1
allele num: 8626
num of homozygotes: 278

Other
type: Population
allele count: 213
allele frequency: 2.361419068736142e-1
allele num: 902
num of homozygotes: 24

Latino
type: Population
allele count: 3308
allele frequency: 2.861096696073344e-1
allele num: 11562
num of homozygotes: 487

African
type: Population
allele count: 2625
allele frequency: 2.525495478160477e-1
allele num: 10394
num of homozygotes: 316

European (Non-Finnish)
type: Population
allele count: 16656
allele frequency: 2.50165214779213e-1
allele num: 66580
num of homozygotes: 2096

European (Finnish)
type: Population
allele count: 1923
allele frequency: 2.917172330097088e-1
allele num: 6592
num of homozygotes: 287

South Asian
type: Population
allele count: 5653
allele frequency: 3.429386071341907e-1
allele num: 16484
num of homozygotes: 1012

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

QD
type: SiteQuality
SIO_000300: 1.785e1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 2.724527e6

GenotypeDepth
all individuals: 181
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
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variant carriers: 0

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 11436
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variant carriers: 0

GenotypeDepth
all individuals: 370
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variant carriers: 0

GenotypeDepth
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 8118
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 1654
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 273
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.552e0

QD
type: SiteQuality
SIO_000300: 3.124e1

DP
type: SiteQuality
SIO_000300: 1.639425e6

VQSLOD
type: SiteQuality
SIO_000300: -3.635e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.76e-1

GenotypeDepth
all individuals: 328
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeDepth
all individuals: 360
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variant carriers: 1

GenotypeDepth
all individuals: 31755
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variant carriers: 0

GenotypeDepth
all individuals: 6
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variant carriers: 0

GenotypeDepth
all individuals: 111
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variant carriers: 0

GenotypeDepth
all individuals: 14644
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variant carriers: 0

GenotypeDepth
all individuals: 2
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variant carriers: 1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 47574
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variant carriers: 0

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 565
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GenotypeQuality
all individuals: 135
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 515
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GenotypeQuality
all individuals: 1412
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 8046
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variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.317497103128621e-4
allele num: 8630
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.471e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.632595e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.391e1

GenotypeDepth
all individuals: 416
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 11132
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 345
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variant carriers: 1

GenotypeDepth
all individuals: 5
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variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 234
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GenotypeQuality
all individuals: 46463
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variant carriers: 0

GenotypeQuality
all individuals: 1375
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 288
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 187
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GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 129
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 1619
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GenotypeQuality
all individuals: 487
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GenotypeQuality
all individuals: 1185
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variant carriers: 0

GenotypeQuality
all individuals: 7910
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GenotypeQuality
all individuals: 155
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variant carriers: 7

GenotypeQuality
all individuals: 98
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GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.905287623474724e-4
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.552213893356803e-5
allele num: 65902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 9.45e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.617982e6

GenotypeDepth
all individuals: 5
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 98
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GenotypeDepth
all individuals: 31225
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GenotypeDepth
all individuals: 331
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GenotypeDepth
all individuals: 14404
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GenotypeDepth
all individuals: 36
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GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 0
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GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1595
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variant carriers: 0

GenotypeQuality
all individuals: 7814
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variant carriers: 0

GenotypeQuality
all individuals: 127
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GenotypeQuality
all individuals: 137
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variant carriers: 2

GenotypeQuality
all individuals: 305
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 46202
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variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
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GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.521190179196203e-5
allele num: 65738
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.49e-1

ClippingRankSum
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FS
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SIO_000300: 4.475e0

MQRankSum
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SIO_000300: 6.08e-1

QD
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SIO_000300: 1.413e1

ReadPosRankSum
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SIO_000300: 1.02e0

BaseQRankSum
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SIO_000300: 4.49e0

InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 1.6093e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65588
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.166044776119403e-4
allele num: 8576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -3.0e-4

VQSLOD
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MQ
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SIO_000300: 5.849e1

ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 3.11e-1

QD
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

East Asian
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allele frequency: 1.052631578947368e-3
allele num: 8550
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65416
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -5.0e-4

MQ
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SIO_000300: 5.965e1

MQRankSum
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SIO_000300: -6.6e-2

DP
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QD
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BaseQRankSum
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SIO_000300: -3.464e0

VQSLOD
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SIO_000300: 2.02e0

FS
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SIO_000300: 1.264e0

ReadPosRankSum
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SIO_000300: 3.98e-1

ClippingRankSum
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SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.807468733485996e-5
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64834
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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BaseQRankSum
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SIO_000300: -4.038e0

MQRankSum
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SIO_000300: -1.93e-1

InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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QD
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SIO_000300: 1.21e1

FS
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SIO_000300: 0.0e0

MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.55860349127182e-5
allele num: 64160
num of homozygotes: 0

East Asian
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Other
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BaseQRankSum
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FS
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MQRankSum
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QD
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DP
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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Other
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Latino
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European (Finnish)
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African
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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MQ
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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FS
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MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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Latino
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Other
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European (Non-Finnish)
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allele num: 55128
num of homozygotes: 0

East Asian
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European (Finnish)
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MQRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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Other
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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DP
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QD
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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East Asian
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African
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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QD
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VQSLOD
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ReadPosRankSum
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