10-123952240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123952240
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123952240
    reference: chr 10
allele count: 1
allele frequency: 8.188666885031116e-5
allele num: 12212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.47G>A
  hgvsp: ENSP00000420967.1:p.Arg16Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-2315G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-2315G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg16Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

10-123952252-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123952252
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123952252
    reference: chr 10
allele count: 1
allele frequency: 8.194034742707309e-5
allele num: 12204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.59C>T
  hgvsp: ENSP00000420967.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-2303C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-2303C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr20Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-123952268-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123952268
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123952268
    reference: chr 10
allele count: 1
allele frequency: 8.21962847279303e-5
allele num: 12166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.75T>C
  hgvsp: ENST00000514539.1:c.75T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-2287T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-2287T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser25Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

10-123952279-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123952279
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123952279
    reference: chr 10
allele count: 1
allele frequency: 8.265829062654984e-5
allele num: 12098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.86G>C
  hgvsp: ENSP00000420967.1:p.Ser29Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-2276G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-2276G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser29Thr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

10-123952317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123952317
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123952317
    reference: chr 10
allele count: 3
allele frequency: 2.57201646090535e-4
allele num: 11664
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.119+5G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-2238G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-2238G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.119+5G>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

10-123954506-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954506
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954506
    reference: chr 10
allele count: 1
allele frequency: 8.924905842243364e-6
allele num: 112046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.120-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-49A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-49A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7040
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

10-123954521-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954521
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954519
    reference: chr 10
allele count: 1
allele frequency: 8.904402336515173e-6
allele num: 112304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-33_5700-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-33_-1054-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-33_336-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-33_-1150-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-33_5847-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.120-33_120-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-33_273-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-33_5847-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-33_273-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-33_175-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-33_5835-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-33_69-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-33_5835-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-33_69-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-33_69-32delCT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-33_69-32delCT
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: CCT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

10-123954522-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954522
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954521
    reference: chr 10
allele count: 3
allele frequency: 2.670036846508482e-5
allele num: 112358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.120-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-32delT
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-32delT
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: CT
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-123954547-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954547
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954547
    reference: chr 10
allele count: 1
allele frequency: 8.736981896973509e-6
allele num: 114456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.120-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-8C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-8C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20412
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.5835-8C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

10-123954548-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954548
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954548
    reference: chr 10
allele count: 1
allele frequency: 8.722197993894462e-6
allele num: 114650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5847-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.120-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1150-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.69-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.273-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.69-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.273-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5835-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1054-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5700-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5835-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5847-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.69-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.175-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.336-7T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.69-7T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.5835-7T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

10-123954561-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954561
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954561
    reference: chr 10
allele count: 1
allele frequency: 8.563256777817739e-6
allele num: 116778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.75C>T
  hgvsp: ENST00000368999.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.75C>T
  hgvsp: ENST00000360561.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.279C>T
  hgvsp: ENST00000513429.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1048C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1144C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.279C>T
  hgvsp: ENST00000358010.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5853C>T
  hgvsp: ENST00000453444.2:c.5853C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5853C>T
  hgvsp: ENST00000515273.1:c.5853C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.181C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.75C>T
  hgvsp: ENST00000260733.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5841C>T
  hgvsp: ENST00000369005.1:c.5841C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.126C>T
  hgvsp: ENST00000514539.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.75C>T
  hgvsp: ENST00000369004.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.342C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5841C>T
  hgvsp: ENST00000334433.3:c.5841C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5706C>T
  hgvsp: ENST00000515603.1:c.5706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1947Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-123954582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954582
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954582
    reference: chr 10
allele count: 1
allele frequency: 8.380543729677181e-6
allele num: 119324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.96G>A
  hgvsp: ENST00000369004.3:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.202G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.96G>A
  hgvsp: ENST00000360561.3:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5874G>A
  hgvsp: ENST00000453444.2:c.5874G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5862G>A
  hgvsp: ENST00000334433.3:c.5862G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1123G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.363G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5874G>A
  hgvsp: ENST00000515273.1:c.5874G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.147G>A
  hgvsp: ENST00000514539.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5727G>A
  hgvsp: ENST00000515603.1:c.5727G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.300G>A
  hgvsp: ENST00000513429.1:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.96G>A
  hgvsp: ENST00000260733.3:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1027G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.300G>A
  hgvsp: ENST00000358010.1:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.96G>A
  hgvsp: ENST00000368999.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5862G>A
  hgvsp: ENST00000369005.1:c.5862G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7039
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1954Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

10-123954588-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954588
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954588
    reference: chr 10
allele count: 1
allele frequency: 8.343902276216541e-6
allele num: 119848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.102G>A
  hgvsp: ENST00000368999.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5733G>A
  hgvsp: ENST00000515603.1:c.5733G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.306G>A
  hgvsp: ENST00000513429.1:c.306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5868G>A
  hgvsp: ENST00000369005.1:c.5868G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.102G>A
  hgvsp: ENST00000360561.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.306G>A
  hgvsp: ENST00000358010.1:c.306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5880G>A
  hgvsp: ENST00000453444.2:c.5880G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.153G>A
  hgvsp: ENST00000514539.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1021G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5880G>A
  hgvsp: ENST00000515273.1:c.5880G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.102G>A
  hgvsp: ENST00000369004.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.102G>A
  hgvsp: ENST00000260733.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1117G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5868G>A
  hgvsp: ENST00000334433.3:c.5868G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.208G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.369G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1956Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

10-123954600-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954600
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954600
    reference: chr 10
allele count: 1
allele frequency: 8.32251406504877e-6
allele num: 120156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5880C>T
  hgvsp: ENST00000334433.3:c.5880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.381C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5745C>T
  hgvsp: ENST00000515603.1:c.5745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-1009C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.318C>T
  hgvsp: ENST00000513429.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.114C>T
  hgvsp: ENST00000368999.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.114C>T
  hgvsp: ENST00000260733.3:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5892C>T
  hgvsp: ENST00000515273.1:c.5892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5892C>T
  hgvsp: ENST00000453444.2:c.5892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.114C>T
  hgvsp: ENST00000360561.3:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.114C>T
  hgvsp: ENST00000369004.3:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5880C>T
  hgvsp: ENST00000369005.1:c.5880C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.165C>T
  hgvsp: ENST00000514539.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.220C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.318C>T
  hgvsp: ENST00000358010.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1105C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr1960Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

10-123954614-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954614
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954614
    reference: chr 10
allele count: 20
allele frequency: 1.665722757104308e-4
allele num: 120068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-995C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5906C>T
  hgvsp: ENSP00000395048.2:p.Pro1969Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5894C>T
  hgvsp: ENSP00000334280.2:p.Pro1965Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5894C>T
  hgvsp: ENSP00000358001.1:p.Pro1965Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.179C>T
  hgvsp: ENSP00000420967.1:p.Pro60Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5906C>T
  hgvsp: ENSP00000424467.1:p.Pro1969Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.128C>T
  hgvsp: ENSP00000357995.1:p.Pro43Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.234C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.332C>T
  hgvsp: ENSP00000425062.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5759C>T
  hgvsp: ENSP00000427618.1:p.Pro1920Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.332C>T
  hgvsp: ENSP00000350701.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1091C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.128C>T
  hgvsp: ENSP00000353763.3:p.Pro43Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.395C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.128C>T
  hgvsp: ENSP00000260733.3:p.Pro43Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.128C>T
  hgvsp: ENSP00000422815.1:p.Pro43Leu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Pro1965Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

10-123954615-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954615
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954615
    reference: chr 10
allele count: 2
allele frequency: 1.66602802259134e-5
allele num: 120046
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5895G>A
  hgvsp: ENST00000369005.1:c.5895G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.333G>A
  hgvsp: ENST00000358010.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.396G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5760G>A
  hgvsp: ENST00000515603.1:c.5760G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.129G>A
  hgvsp: ENST00000260733.3:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.180G>A
  hgvsp: ENST00000514539.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.129G>A
  hgvsp: ENST00000360561.3:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.235G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.129G>A
  hgvsp: ENST00000368999.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5895G>A
  hgvsp: ENST00000334433.3:c.5895G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5907G>A
  hgvsp: ENST00000453444.2:c.5907G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.333G>A
  hgvsp: ENST00000513429.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-994G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5907G>A
  hgvsp: ENST00000515273.1:c.5907G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.129G>A
  hgvsp: ENST00000369004.3:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1090G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1965Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

10-123954621-T-TCCACCCCCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954621
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954630
    reference: chr 10
allele count: 1
allele frequency: 8.339727124128499e-6
allele num: 119908
alternate allele: TCCACCCCCA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsp: ENSP00000424467.1:p.Pro1975_Pro1977dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.348_356dupACCACCCCC
  hgvsp: ENSP00000350701.1:p.Pro117_Pro119dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsp: ENSP00000395048.2:p.Pro1975_Pro1977dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsp: ENSP00000358001.1:p.Pro1971_Pro1973dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsp: ENSP00000334280.2:p.Pro1971_Pro1973dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.348_356dupACCACCCCC
  hgvsp: ENSP00000425062.1:p.Pro117_Pro119dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.195_203dupACCACCCCC
  hgvsp: ENSP00000420967.1:p.Pro66_Pro68dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.144_152dupACCACCCCC
  hgvsp: ENSP00000357995.1:p.Pro49_Pro51dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.144_152dupACCACCCCC
  hgvsp: ENSP00000353763.3:p.Pro49_Pro51dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsp: ENSP00000427618.1:p.Pro1926_Pro1928dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.250_258dupACCACCCCC
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.144_152dupACCACCCCC
  hgvsp: ENSP00000260733.3:p.Pro49_Pro51dup
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.411_419dupACCACCCCC
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.144_152dupACCACCCCC
  hgvsp: ENSP00000422815.1:p.Pro49_Pro51dup
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1971_Pro1973dup
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

10-123954629-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954629
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954629
    reference: chr 10
allele count: 1
allele frequency: 8.358688020328329e-6
allele num: 119636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.194C>T
  hgvsp: ENSP00000420967.1:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.143C>T
  hgvsp: ENSP00000353763.3:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.347C>T
  hgvsp: ENSP00000350701.1:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.249C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.143C>T
  hgvsp: ENSP00000357995.1:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.143C>T
  hgvsp: ENSP00000260733.3:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5921C>T
  hgvsp: ENSP00000424467.1:p.Pro1974Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1076C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5909C>T
  hgvsp: ENSP00000358001.1:p.Pro1970Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5774C>T
  hgvsp: ENSP00000427618.1:p.Pro1925Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5921C>T
  hgvsp: ENSP00000395048.2:p.Pro1974Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5909C>T
  hgvsp: ENSP00000334280.2:p.Pro1970Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.347C>T
  hgvsp: ENSP00000425062.1:p.Pro116Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.143C>T
  hgvsp: ENSP00000422815.1:p.Pro48Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-980C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.410C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1970Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

10-123954630-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954630
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954630
    reference: chr 10
allele count: 2
allele frequency: 1.672576436743159e-5
allele num: 119576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.250A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.348A>T
  hgvsp: ENST00000513429.1:c.348A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5922A>T
  hgvsp: ENST00000453444.2:c.5922A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.144A>T
  hgvsp: ENST00000260733.3:c.144A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5922A>T
  hgvsp: ENST00000515273.1:c.5922A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5775A>T
  hgvsp: ENST00000515603.1:c.5775A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.144A>T
  hgvsp: ENST00000360561.3:c.144A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-979A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5910A>T
  hgvsp: ENST00000334433.3:c.5910A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.144A>T
  hgvsp: ENST00000368999.1:c.144A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.144A>T
  hgvsp: ENST00000369004.3:c.144A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.195A>T
  hgvsp: ENST00000514539.1:c.195A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1075A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.348A>T
  hgvsp: ENST00000358010.1:c.348A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.411A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5910A>T
  hgvsp: ENST00000369005.1:c.5910A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1970Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/10-123954633-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954633
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954633
    reference: chr 10
allele count: 1
allele frequency: 8.374507997655138e-6
allele num: 119410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5778A>C
  hgvsp: ENST00000515603.1:c.5778A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.351A>C
  hgvsp: ENST00000358010.1:c.351A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5925A>C
  hgvsp: ENST00000453444.2:c.5925A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.147A>C
  hgvsp: ENST00000260733.3:c.147A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.351A>C
  hgvsp: ENST00000513429.1:c.351A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5913A>C
  hgvsp: ENST00000369005.1:c.5913A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.147A>C
  hgvsp: ENST00000368999.1:c.147A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.147A>C
  hgvsp: ENST00000360561.3:c.147A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.147A>C
  hgvsp: ENST00000369004.3:c.147A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-976A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.414A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5913A>C
  hgvsp: ENST00000334433.3:c.5913A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.198A>C
  hgvsp: ENST00000514539.1:c.198A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.253A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5925A>C
  hgvsp: ENST00000515273.1:c.5925A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1072A>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21026
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1971Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

10-123954633-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954633
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954633
    reference: chr 10
allele count: 4
allele frequency: 3.349803199062055e-5
allele num: 119410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5913A>G
  hgvsp: ENST00000334433.3:c.5913A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.198A>G
  hgvsp: ENST00000514539.1:c.198A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.351A>G
  hgvsp: ENST00000513429.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-976A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5925A>G
  hgvsp: ENST00000453444.2:c.5925A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5925A>G
  hgvsp: ENST00000515273.1:c.5925A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.147A>G
  hgvsp: ENST00000360561.3:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.147A>G
  hgvsp: ENST00000369004.3:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.414A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5913A>G
  hgvsp: ENST00000369005.1:c.5913A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.147A>G
  hgvsp: ENST00000368999.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.253A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.147A>G
  hgvsp: ENST00000260733.3:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.351A>G
  hgvsp: ENST00000358010.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5778A>G
  hgvsp: ENST00000515603.1:c.5778A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1072A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1971Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

10-123954634-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954634
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954634
    reference: chr 10
allele count: 1
allele frequency: 8.372404554588077e-6
allele num: 119440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.352C>G
  hgvsp: ENSP00000425062.1:p.Pro118Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.199C>G
  hgvsp: ENSP00000420967.1:p.Pro67Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1071C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.352C>G
  hgvsp: ENSP00000350701.1:p.Pro118Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5914C>G
  hgvsp: ENSP00000358001.1:p.Pro1972Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.148C>G
  hgvsp: ENSP00000357995.1:p.Pro50Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5926C>G
  hgvsp: ENSP00000395048.2:p.Pro1976Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.148C>G
  hgvsp: ENSP00000353763.3:p.Pro50Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.148C>G
  hgvsp: ENSP00000422815.1:p.Pro50Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5926C>G
  hgvsp: ENSP00000424467.1:p.Pro1976Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5914C>G
  hgvsp: ENSP00000334280.2:p.Pro1972Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.415C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.148C>G
  hgvsp: ENSP00000260733.3:p.Pro50Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-975C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5779C>G
  hgvsp: ENSP00000427618.1:p.Pro1927Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.254C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1972Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

10-123954634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954634
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954634
    reference: chr 10
allele count: 1
allele frequency: 8.372404554588077e-6
allele num: 119440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.148C>T
  hgvsp: ENSP00000353763.3:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.254C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-975C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.199C>T
  hgvsp: ENSP00000420967.1:p.Pro67Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5926C>T
  hgvsp: ENSP00000395048.2:p.Pro1976Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5779C>T
  hgvsp: ENSP00000427618.1:p.Pro1927Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.148C>T
  hgvsp: ENSP00000260733.3:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.148C>T
  hgvsp: ENSP00000357995.1:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.352C>T
  hgvsp: ENSP00000425062.1:p.Pro118Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5926C>T
  hgvsp: ENSP00000424467.1:p.Pro1976Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5914C>T
  hgvsp: ENSP00000358001.1:p.Pro1972Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5914C>T
  hgvsp: ENSP00000334280.2:p.Pro1972Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.352C>T
  hgvsp: ENSP00000350701.1:p.Pro118Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1071C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.415C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.148C>T
  hgvsp: ENSP00000422815.1:p.Pro50Ser
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1972Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

10-123954635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954635
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954635
    reference: chr 10
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5780C>T
  hgvsp: ENSP00000427618.1:p.Pro1927Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5927C>T
  hgvsp: ENSP00000395048.2:p.Pro1976Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.200C>T
  hgvsp: ENSP00000420967.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.353C>T
  hgvsp: ENSP00000350701.1:p.Pro118Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.149C>T
  hgvsp: ENSP00000260733.3:p.Pro50Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5927C>T
  hgvsp: ENSP00000424467.1:p.Pro1976Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-974C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5915C>T
  hgvsp: ENSP00000358001.1:p.Pro1972Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.255C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.149C>T
  hgvsp: ENSP00000357995.1:p.Pro50Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.149C>T
  hgvsp: ENSP00000422815.1:p.Pro50Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.353C>T
  hgvsp: ENSP00000425062.1:p.Pro118Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.149C>T
  hgvsp: ENSP00000353763.3:p.Pro50Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1070C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.416C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5915C>T
  hgvsp: ENSP00000334280.2:p.Pro1972Leu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1972Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/10-123954637-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954637
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954637
    reference: chr 10
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.151C>A
  hgvsp: ENSP00000260733.3:p.Pro51Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.151C>A
  hgvsp: ENSP00000422815.1:p.Pro51Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.355C>A
  hgvsp: ENSP00000425062.1:p.Pro119Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5929C>A
  hgvsp: ENSP00000424467.1:p.Pro1977Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.355C>A
  hgvsp: ENSP00000350701.1:p.Pro119Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.418C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5917C>A
  hgvsp: ENSP00000334280.2:p.Pro1973Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1068C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.151C>A
  hgvsp: ENSP00000357995.1:p.Pro51Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-972C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5929C>A
  hgvsp: ENSP00000395048.2:p.Pro1977Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.151C>A
  hgvsp: ENSP00000353763.3:p.Pro51Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.202C>A
  hgvsp: ENSP00000420967.1:p.Pro68Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.257C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5782C>A
  hgvsp: ENSP00000427618.1:p.Pro1928Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5917C>A
  hgvsp: ENSP00000358001.1:p.Pro1973Thr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1973Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

10-123954637-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954637
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954637
    reference: chr 10
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5917C>G
  hgvsp: ENSP00000334280.2:p.Pro1973Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5782C>G
  hgvsp: ENSP00000427618.1:p.Pro1928Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.355C>G
  hgvsp: ENSP00000350701.1:p.Pro119Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5917C>G
  hgvsp: ENSP00000358001.1:p.Pro1973Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.355C>G
  hgvsp: ENSP00000425062.1:p.Pro119Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.202C>G
  hgvsp: ENSP00000420967.1:p.Pro68Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.151C>G
  hgvsp: ENSP00000357995.1:p.Pro51Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5929C>G
  hgvsp: ENSP00000424467.1:p.Pro1977Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5929C>G
  hgvsp: ENSP00000395048.2:p.Pro1977Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.151C>G
  hgvsp: ENSP00000260733.3:p.Pro51Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.151C>G
  hgvsp: ENSP00000422815.1:p.Pro51Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.418C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-972C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1068C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.151C>G
  hgvsp: ENSP00000353763.3:p.Pro51Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.257C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1973Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-123954638-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954638
    reference: chr 10
allele count: 78
allele frequency: 6.5302568567697e-4
allele num: 119444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.419C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5918C>A
  hgvsp: ENSP00000358001.1:p.Pro1973His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.152C>A
  hgvsp: ENSP00000260733.3:p.Pro51His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5783C>A
  hgvsp: ENSP00000427618.1:p.Pro1928His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.356C>A
  hgvsp: ENSP00000425062.1:p.Pro119His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.356C>A
  hgvsp: ENSP00000350701.1:p.Pro119His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-971C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.258C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5918C>A
  hgvsp: ENSP00000334280.2:p.Pro1973His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5930C>A
  hgvsp: ENSP00000424467.1:p.Pro1977His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.152C>A
  hgvsp: ENSP00000357995.1:p.Pro51His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.152C>A
  hgvsp: ENSP00000353763.3:p.Pro51His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.152C>A
  hgvsp: ENSP00000422815.1:p.Pro51His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5930C>A
  hgvsp: ENSP00000395048.2:p.Pro1977His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1067C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.203C>A
  hgvsp: ENSP00000420967.1:p.Pro68His
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15209
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Pro1973His
num of homozygotes: 1
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

10-123954638-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954638
    reference: chr 10
allele count: 1
allele frequency: 8.372124175345769e-6
allele num: 119444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.203C>G
  hgvsp: ENSP00000420967.1:p.Pro68Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5930C>G
  hgvsp: ENSP00000395048.2:p.Pro1977Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5783C>G
  hgvsp: ENSP00000427618.1:p.Pro1928Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.152C>G
  hgvsp: ENSP00000357995.1:p.Pro51Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.356C>G
  hgvsp: ENSP00000350701.1:p.Pro119Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.258C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-971C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.152C>G
  hgvsp: ENSP00000353763.3:p.Pro51Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.356C>G
  hgvsp: ENSP00000425062.1:p.Pro119Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5918C>G
  hgvsp: ENSP00000358001.1:p.Pro1973Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5930C>G
  hgvsp: ENSP00000424467.1:p.Pro1977Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.152C>G
  hgvsp: ENSP00000260733.3:p.Pro51Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1067C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.419C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5918C>G
  hgvsp: ENSP00000334280.2:p.Pro1973Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.152C>G
  hgvsp: ENSP00000422815.1:p.Pro51Arg
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1973Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

10-123954638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954638
    reference: chr 10
allele count: 1
allele frequency: 8.372124175345769e-6
allele num: 119444
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5918C>T
  hgvsp: ENSP00000358001.1:p.Pro1973Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1067C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5930C>T
  hgvsp: ENSP00000424467.1:p.Pro1977Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.152C>T
  hgvsp: ENSP00000422815.1:p.Pro51Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.203C>T
  hgvsp: ENSP00000420967.1:p.Pro68Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.258C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.356C>T
  hgvsp: ENSP00000350701.1:p.Pro119Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5930C>T
  hgvsp: ENSP00000395048.2:p.Pro1977Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.152C>T
  hgvsp: ENSP00000357995.1:p.Pro51Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.152C>T
  hgvsp: ENSP00000260733.3:p.Pro51Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.152C>T
  hgvsp: ENSP00000353763.3:p.Pro51Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.356C>T
  hgvsp: ENSP00000425062.1:p.Pro119Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5918C>T
  hgvsp: ENSP00000334280.2:p.Pro1973Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5783C>T
  hgvsp: ENSP00000427618.1:p.Pro1928Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-971C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.419C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1973Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

10-123954640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954640
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954640
    reference: chr 10
allele count: 1
allele frequency: 8.381527114240214e-6
allele num: 119310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5932G>A
  hgvsp: ENSP00000395048.2:p.Glu1978Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5932G>A
  hgvsp: ENSP00000424467.1:p.Glu1978Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.358G>A
  hgvsp: ENSP00000350701.1:p.Glu120Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.154G>A
  hgvsp: ENSP00000353763.3:p.Glu52Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.358G>A
  hgvsp: ENSP00000425062.1:p.Glu120Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.154G>A
  hgvsp: ENSP00000260733.3:p.Glu52Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.421G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.260G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5920G>A
  hgvsp: ENSP00000334280.2:p.Glu1974Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1065G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5785G>A
  hgvsp: ENSP00000427618.1:p.Glu1929Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.154G>A
  hgvsp: ENSP00000357995.1:p.Glu52Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.154G>A
  hgvsp: ENSP00000422815.1:p.Glu52Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-969G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.205G>A
  hgvsp: ENSP00000420967.1:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5920G>A
  hgvsp: ENSP00000358001.1:p.Glu1974Lys
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1974Lys
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-123954642-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954642
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954642
    reference: chr 10
allele count: 1
allele frequency: 8.378156470450242e-6
allele num: 119358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.360A>C
  hgvsp: ENSP00000350701.1:p.Glu120Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5934A>C
  hgvsp: ENSP00000395048.2:p.Glu1978Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.156A>C
  hgvsp: ENSP00000357995.1:p.Glu52Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5934A>C
  hgvsp: ENSP00000424467.1:p.Glu1978Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.207A>C
  hgvsp: ENSP00000420967.1:p.Glu69Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.423A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.156A>C
  hgvsp: ENSP00000422815.1:p.Glu52Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.360A>C
  hgvsp: ENSP00000425062.1:p.Glu120Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.156A>C
  hgvsp: ENSP00000260733.3:p.Glu52Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-967A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.262A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.156A>C
  hgvsp: ENSP00000353763.3:p.Glu52Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5922A>C
  hgvsp: ENSP00000358001.1:p.Glu1974Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1063A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5922A>C
  hgvsp: ENSP00000334280.2:p.Glu1974Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5787A>C
  hgvsp: ENSP00000427618.1:p.Glu1929Asp
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21121
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1974Asp
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

10-123954642-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954642
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954642
    reference: chr 10
allele count: 1
allele frequency: 8.378156470450242e-6
allele num: 119358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5934A>G
  hgvsp: ENST00000453444.2:c.5934A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1063A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.262A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5922A>G
  hgvsp: ENST00000369005.1:c.5922A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.156A>G
  hgvsp: ENST00000260733.3:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.207A>G
  hgvsp: ENST00000514539.1:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.360A>G
  hgvsp: ENST00000358010.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-967A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.360A>G
  hgvsp: ENST00000513429.1:c.360A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.156A>G
  hgvsp: ENST00000368999.1:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5922A>G
  hgvsp: ENST00000334433.3:c.5922A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.156A>G
  hgvsp: ENST00000360561.3:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5787A>G
  hgvsp: ENST00000515603.1:c.5787A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5934A>G
  hgvsp: ENST00000515273.1:c.5934A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.423A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.156A>G
  hgvsp: ENST00000369004.3:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1974Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-123954654-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954654
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954654
    reference: chr 10
allele count: 1
allele frequency: 8.415949908266146e-6
allele num: 118822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.219A>T
  hgvsp: ENSP00000420967.1:p.Glu73Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5946A>T
  hgvsp: ENSP00000424467.1:p.Glu1982Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.168A>T
  hgvsp: ENSP00000422815.1:p.Glu56Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5799A>T
  hgvsp: ENSP00000427618.1:p.Glu1933Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.168A>T
  hgvsp: ENSP00000260733.3:p.Glu56Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5934A>T
  hgvsp: ENSP00000334280.2:p.Glu1978Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.168A>T
  hgvsp: ENSP00000353763.3:p.Glu56Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.435A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1051A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.168A>T
  hgvsp: ENSP00000357995.1:p.Glu56Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5934A>T
  hgvsp: ENSP00000358001.1:p.Glu1978Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.372A>T
  hgvsp: ENSP00000425062.1:p.Glu124Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.372A>T
  hgvsp: ENSP00000350701.1:p.Glu124Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5946A>T
  hgvsp: ENSP00000395048.2:p.Glu1982Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-955A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.274A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1978Asp
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

10-123954657-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954657
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954657
    reference: chr 10
allele count: 1
allele frequency: 8.425025696328374e-6
allele num: 118694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.375C>G
  hgvsp: ENST00000358010.1:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5802C>G
  hgvsp: ENST00000515603.1:c.5802C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.222C>G
  hgvsp: ENST00000514539.1:c.222C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.171C>G
  hgvsp: ENST00000368999.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5949C>G
  hgvsp: ENST00000453444.2:c.5949C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5949C>G
  hgvsp: ENST00000515273.1:c.5949C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-952C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.171C>G
  hgvsp: ENST00000360561.3:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.277C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5937C>G
  hgvsp: ENST00000369005.1:c.5937C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.171C>G
  hgvsp: ENST00000260733.3:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1048C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5937C>G
  hgvsp: ENST00000334433.3:c.5937C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.375C>G
  hgvsp: ENST00000513429.1:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.171C>G
  hgvsp: ENST00000369004.3:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.438C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1979Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

10-123954657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954657
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954657
    reference: chr 10
allele count: 47
allele frequency: 3.959762077274336e-4
allele num: 118694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5802C>T
  hgvsp: ENST00000515603.1:c.5802C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.171C>T
  hgvsp: ENST00000369004.3:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.171C>T
  hgvsp: ENST00000360561.3:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.375C>T
  hgvsp: ENST00000358010.1:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5949C>T
  hgvsp: ENST00000453444.2:c.5949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5949C>T
  hgvsp: ENST00000515273.1:c.5949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.171C>T
  hgvsp: ENST00000368999.1:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5937C>T
  hgvsp: ENST00000369005.1:c.5937C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.375C>T
  hgvsp: ENST00000513429.1:c.375C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.171C>T
  hgvsp: ENST00000260733.3:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5937C>T
  hgvsp: ENST00000334433.3:c.5937C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.438C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1048C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.222C>T
  hgvsp: ENST00000514539.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.277C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-952C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21006
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1979Pro
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-123954658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954658
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954658
    reference: chr 10
allele count: 218
allele frequency: 1.837801382566178e-3
allele num: 118620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.172G>A
  hgvsp: ENSP00000357995.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.223G>A
  hgvsp: ENSP00000420967.1:p.Glu75Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.439G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5950G>A
  hgvsp: ENSP00000424467.1:p.Glu1984Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5938G>A
  hgvsp: ENSP00000334280.2:p.Glu1980Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5803G>A
  hgvsp: ENSP00000427618.1:p.Glu1935Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1047G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5950G>A
  hgvsp: ENSP00000395048.2:p.Glu1984Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.172G>A
  hgvsp: ENSP00000353763.3:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.278G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.172G>A
  hgvsp: ENSP00000260733.3:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.376G>A
  hgvsp: ENSP00000350701.1:p.Glu126Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-951G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5938G>A
  hgvsp: ENSP00000358001.1:p.Glu1980Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.376G>A
  hgvsp: ENSP00000425062.1:p.Glu126Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.172G>A
  hgvsp: ENSP00000422815.1:p.Glu58Lys
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
hgvs: p.Glu1980Lys
num of homozygotes: 2
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

10-123954665-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954665
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954665
    reference: chr 10
allele count: 1
allele frequency: 8.464676903282601e-6
allele num: 118138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-944G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.285G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.446G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5810G>C
  hgvsp: ENSP00000427618.1:p.Ser1937Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.383G>C
  hgvsp: ENSP00000350701.1:p.Ser128Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.179G>C
  hgvsp: ENSP00000357995.1:p.Ser60Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.179G>C
  hgvsp: ENSP00000260733.3:p.Ser60Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5957G>C
  hgvsp: ENSP00000395048.2:p.Ser1986Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.179G>C
  hgvsp: ENSP00000422815.1:p.Ser60Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5957G>C
  hgvsp: ENSP00000424467.1:p.Ser1986Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5945G>C
  hgvsp: ENSP00000334280.2:p.Ser1982Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.230G>C
  hgvsp: ENSP00000420967.1:p.Ser77Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.179G>C
  hgvsp: ENSP00000353763.3:p.Ser60Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.383G>C
  hgvsp: ENSP00000425062.1:p.Ser128Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5945G>C
  hgvsp: ENSP00000358001.1:p.Ser1982Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1040G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20966
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser1982Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

10-123954672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954672
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954672
    reference: chr 10
allele count: 1
allele frequency: 8.518177791406862e-6
allele num: 117396
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5952G>A
  hgvsp: ENST00000369005.1:c.5952G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1033G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.237G>A
  hgvsp: ENST00000514539.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.186G>A
  hgvsp: ENST00000368999.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-937G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.390G>A
  hgvsp: ENST00000358010.1:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5964G>A
  hgvsp: ENST00000515273.1:c.5964G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5952G>A
  hgvsp: ENST00000334433.3:c.5952G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.186G>A
  hgvsp: ENST00000260733.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.390G>A
  hgvsp: ENST00000513429.1:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5817G>A
  hgvsp: ENST00000515603.1:c.5817G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.186G>A
  hgvsp: ENST00000369004.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.186G>A
  hgvsp: ENST00000360561.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.453G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.292G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5964G>A
  hgvsp: ENST00000453444.2:c.5964G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln1984Gln
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-123954673-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954673
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954673
    reference: chr 10
allele count: 1
allele frequency: 8.525439912699495e-6
allele num: 117296
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5953C>T
  hgvsp: ENSP00000358001.1:p.Pro1985Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-936C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.187C>T
  hgvsp: ENSP00000422815.1:p.Pro63Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.187C>T
  hgvsp: ENSP00000357995.1:p.Pro63Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.238C>T
  hgvsp: ENSP00000420967.1:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5965C>T
  hgvsp: ENSP00000395048.2:p.Pro1989Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.187C>T
  hgvsp: ENSP00000260733.3:p.Pro63Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.187C>T
  hgvsp: ENSP00000353763.3:p.Pro63Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.391C>T
  hgvsp: ENSP00000425062.1:p.Pro131Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5965C>T
  hgvsp: ENSP00000424467.1:p.Pro1989Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1032C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.391C>T
  hgvsp: ENSP00000350701.1:p.Pro131Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5953C>T
  hgvsp: ENSP00000334280.2:p.Pro1985Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.293C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.454C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5818C>T
  hgvsp: ENSP00000427618.1:p.Pro1940Ser
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1985Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

10-123954680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954680
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954680
    reference: chr 10
allele count: 9
allele frequency: 7.720285479000824e-5
allele num: 116576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-929C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5825C>T
  hgvsp: ENSP00000427618.1:p.Pro1942Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5960C>T
  hgvsp: ENSP00000358001.1:p.Pro1987Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5972C>T
  hgvsp: ENSP00000395048.2:p.Pro1991Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.194C>T
  hgvsp: ENSP00000353763.3:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.194C>T
  hgvsp: ENSP00000357995.1:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.245C>T
  hgvsp: ENSP00000420967.1:p.Pro82Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5960C>T
  hgvsp: ENSP00000334280.2:p.Pro1987Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1025C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.398C>T
  hgvsp: ENSP00000425062.1:p.Pro133Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.194C>T
  hgvsp: ENSP00000260733.3:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.194C>T
  hgvsp: ENSP00000422815.1:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.461C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.398C>T
  hgvsp: ENSP00000350701.1:p.Pro133Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5972C>T
  hgvsp: ENSP00000424467.1:p.Pro1991Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.300C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1987Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

10-123954681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954681
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954681
    reference: chr 10
allele count: 10
allele frequency: 8.603926832206219e-5
allele num: 116226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5826G>A
  hgvsp: ENST00000515603.1:c.5826G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5961G>A
  hgvsp: ENST00000334433.3:c.5961G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5973G>A
  hgvsp: ENST00000453444.2:c.5973G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5961G>A
  hgvsp: ENST00000369005.1:c.5961G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.246G>A
  hgvsp: ENST00000514539.1:c.246G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.399G>A
  hgvsp: ENST00000358010.1:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.195G>A
  hgvsp: ENST00000368999.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.195G>A
  hgvsp: ENST00000260733.3:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.195G>A
  hgvsp: ENST00000369004.3:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-928G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1024G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5973G>A
  hgvsp: ENST00000515273.1:c.5973G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.195G>A
  hgvsp: ENST00000360561.3:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.399G>A
  hgvsp: ENST00000513429.1:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.301G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.462G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1987Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

10-123954698-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954698
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954698
    reference: chr 10
allele count: 1
allele frequency: 8.754267705506434e-6
allele num: 114230
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+7A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+7A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14638
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.5971+7A>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

10-123954700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954700
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954700
    reference: chr 10
allele count: 6
allele frequency: 5.267778753292362e-5
allele num: 113900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+9G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+9G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

10-123954710-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954710
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954710
    reference: chr 10
allele count: 1
allele frequency: 8.889362988248262e-6
allele num: 112494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+19G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+19G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-123954715-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954715
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954714
    reference: chr 10
allele count: 20
allele frequency: 1.788556813507181e-4
allele num: 111822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+25delA
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+25delA
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13736
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18463
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: CA
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-123954718-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954718
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954718
    reference: chr 10
allele count: 3
allele frequency: 2.692321499084611e-5
allele num: 111428
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+27A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+27A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6445
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

10-123954721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954721
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954721
    reference: chr 10
allele count: 1
allele frequency: 9.007386056566384e-6
allele num: 111020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+30G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+30G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

10-123954725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954725
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954725
    reference: chr 10
allele count: 13
allele frequency: 1.177024482109228e-4
allele num: 110448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+34T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+34T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

10-123954727-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954727
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954727
    reference: chr 10
allele count: 2
allele frequency: 1.811823963183737e-5
allele num: 110386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+36T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+36T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

10-123954730-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954730
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954730
    reference: chr 10
allele count: 1
allele frequency: 9.079518422342878e-6
allele num: 110138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+39A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+39A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

10-123954737-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954737
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954737
    reference: chr 10
allele count: 5
allele frequency: 4.576407703009446e-5
allele num: 109256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+46A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+46A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12530
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

10-123954737-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954737
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954737
    reference: chr 10
allele count: 1
allele frequency: 9.152815406018891e-6
allele num: 109256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+46A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+46A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

10-123954738-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954738
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954738
    reference: chr 10
allele count: 1306
allele frequency: 1.196891381648887e-2
allele num: 109116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+47G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+47G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 4.25e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6289
  bin: 1.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 12231
  bin: 2.75e1
  variant carriers: 229
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 3.75e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 1.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 88
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS

10-123954743-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123954743
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123954743
    reference: chr 10
allele count: 1
allele frequency: 9.206068640447784e-6
allele num: 108624
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5971+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-918+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.472+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.205+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5983+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5983+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.205+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5836+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.311+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5971+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-1014+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.205+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.409+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.205+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.256+52G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.409+52G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11898
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

10-123969788-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969788
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969788
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 17020
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.232G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-124G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-124G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23457
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-123969789-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969789
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969789
    reference: chr 10
allele count: 2
allele frequency: 1.185536455245999e-4
allele num: 16870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.233C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-123C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-123C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-123969790-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969790
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969790
    reference: chr 10
allele count: 132
allele frequency: 7.731053063136933e-3
allele num: 17074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.234G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-122G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-122G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26642
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 23660
  bin: 7.5e0
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 3
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

10-123969792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969792
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969792
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 17216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.236G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-120G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-120G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 23889
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

10-123969793-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969793
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969793
    reference: chr 10
allele count: 1
allele frequency: 5.785697755149271e-5
allele num: 17284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.237G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-119G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-119G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP

10-123969803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969803
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969803
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 18286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.247G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-109G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-109G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27439
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

10-123969805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969805
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969805
    reference: chr 10
allele count: 9
allele frequency: 4.823151125401929e-4
allele num: 18660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.249C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-107C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-107C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

10-123969806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969806
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969806
    reference: chr 10
allele count: 1
allele frequency: 5.239991616013414e-5
allele num: 19084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.250G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-106G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-106G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30025
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-123969813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969813
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969813
    reference: chr 10
allele count: 1
allele frequency: 4.807230074031343e-5
allele num: 20802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.5972-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000420967
  ensembl transcript: ENST00000514539
  gene symbol: TACC2
  hgvsc: ENST00000514539.1:c.257-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.410-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.5984-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000368997
  gene symbol: TACC2
  hgvsc: ENST00000368997.3:n.257G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.410-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357995
  ensembl transcript: ENST00000368999
  gene symbol: TACC2
  hgvsc: ENST00000368999.1:c.206-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357997
  ensembl transcript: ENST00000369001
  gene symbol: TACC2
  hgvsc: ENST00000369001.1:c.-917-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-99G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000357996
  ensembl transcript: ENST00000369000
  gene symbol: TACC2
  hgvsc: ENST00000369000.1:c.-917-99G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33935
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

10-123969814-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123969814
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123969814
    reference: chr 10
allele count: 3
allele frequency: 1.421127427759356e-4
allele num: 21110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000353763
  ensembl transcript: ENST00000360561
  gene symbol: TACC2
  hgvsc: ENST00000360561.3:c.206-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000493951
  gene symbol: TACC2
  hgvsc: ENST00000493951.1:n.473-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.5984-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.5837-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl transcript: ENST00000492237
  gene symbol: TACC2
  hgvsc: ENST00000492237.1:n.312-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.5972-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000260733
  ensembl transcript: ENST00000260733
  gene symbol: TACC2
  hgvsc: ENST00000260733.3:c.206-98T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000422815
  ensembl transcript: ENST00000369004
  gene symbol: TACC2
  hgvsc: ENST00000369004.3:c.206-98T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: false
consequence: non coding transcript exon
filter: PASS
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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Latino
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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South Asian
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Latino
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East Asian
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DP
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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QD
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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MQRankSum
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FS
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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Latino
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QD
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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GenotypeDepth
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European (Non-Finnish)
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East Asian
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African
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DP
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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MQ
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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East Asian
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ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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MQ
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DP
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QD
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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QD
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FS
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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Other
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Latino
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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ClippingRankSum
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FS
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MQRankSum
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MQ
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DP
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QD
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VQSLOD
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ReadPosRankSum
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European (Finnish)
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.510209012927389e-5
allele num: 66216
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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VQSLOD
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QD
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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allele num: 8562
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Other
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European (Non-Finnish)
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allele count: 11
allele frequency: 1.660226998309587e-4
allele num: 66256
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African
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allele count: 0
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num of homozygotes: 0

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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QD
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Latino
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allele num: 11522
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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East Asian
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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BaseQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11520
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11504
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African
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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BaseQRankSum
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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FS
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QD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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African
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Other
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European (Non-Finnish)
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allele frequency: 3.029017992366875e-5
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South Asian
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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African
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ReadPosRankSum
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VQSLOD
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DP
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FS
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Non-Finnish)
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allele num: 65950
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Latino
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South Asian
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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East Asian
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South Asian
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VQSLOD
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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DP
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InbreedingCoeff
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QD
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FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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African
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European (Non-Finnish)
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DP
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FS
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QD
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MQ
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VQSLOD
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African
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European (Non-Finnish)
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FS
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MQRankSum
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VQSLOD
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DP
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MQ
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Latino
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East Asian
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South Asian
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African
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European (Non-Finnish)
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MQ
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BaseQRankSum
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MQRankSum
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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African
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East Asian
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South Asian
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Latino
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
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VQSLOD
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DP
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QD
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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Latino
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQ
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DP
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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Other
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QD
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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East Asian
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FS
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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South Asian
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FS
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VQSLOD
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QD
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DP
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ClippingRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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SIO_000300: 4.71e-1

InbreedingCoeff
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SIO_000300: 1.0e-4

BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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allele frequency: 9.140489320861644e-5
allele num: 65642
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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European (Finnish)
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DP
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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European (Finnish)
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African
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65204
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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DP
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

South Asian
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European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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MQ
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ReadPosRankSum
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FS
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DP
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQRankSum
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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African
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Latino
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BaseQRankSum
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MQ
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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Other
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South Asian
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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Latino
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QD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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BaseQRankSum
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FS
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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South Asian
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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DP
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.19047619047619e-4
allele num: 8400
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.061758980711379e-3
allele num: 11302
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.259445843828715e-3
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.3e-3

VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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MQ
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SIO_000300: 5.932e1

ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62940
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10950
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.099958000839983e-4
allele num: 9524
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 3.38e0

VQSLOD
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SIO_000300: 1.19e0

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -1.9e-3

MQRankSum
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FS
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SIO_000300: 1.358e0

ReadPosRankSum
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SIO_000300: -9.27e-1

QD
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SIO_000300: 1.425e1

ClippingRankSum
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DP
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SIO_000300: 1.670687e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.591089896579157e-5
allele num: 62850
num of homozygotes: 0

South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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DP
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SIO_000300: 1.655082e6

MQ
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ClippingRankSum
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QD
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
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African
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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BaseQRankSum
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 3

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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variant carriers: 12

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 1144

GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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bin: 8.25e1
variant carriers: 20

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10442
num of homozygotes: 0

African
type: Population
allele count: 1249
allele frequency: 1.328440757285684e-1
allele num: 9402
num of homozygotes: 88

Latino
type: Population
allele count: 46
allele frequency: 4.085257548845471e-3
allele num: 11260
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.544529262086514e-3
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.442122804768619e-4
allele num: 62408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.611037e6

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.64e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.877e0

QD
type: SiteQuality
SIO_000300: 1.475e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

FS
type: SiteQuality
SIO_000300: 7.37e-1

GenotypeDepth
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4214
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 1591
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5631
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variant carriers: 0

GenotypeQuality
all individuals: 1906
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.699321047526673e-5
allele num: 10310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

DP
type: SiteQuality
SIO_000300: 1.597978e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

GenotypeDepth
all individuals: 309
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 282
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variant carriers: 0

GenotypeDepth
all individuals: 578
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 118
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GenotypeDepth
all individuals: 547
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GenotypeDepth
all individuals: 179
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GenotypeDepth
all individuals: 193
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GenotypeQuality
all individuals: 406
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 507
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 201
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variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.23e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.216e0

DP
type: SiteQuality
SIO_000300: 5.16156e5

MQ
type: SiteQuality
SIO_000300: 5.728e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

QD
type: SiteQuality
SIO_000300: 6.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeDepth
all individuals: 580
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26889
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variant carriers: 1

GenotypeDepth
all individuals: 77
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variant carriers: 0

GenotypeDepth
all individuals: 245
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GenotypeDepth
all individuals: 604
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variant carriers: 0

GenotypeDepth
all individuals: 132
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GenotypeDepth
all individuals: 91
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variant carriers: 0

GenotypeDepth
all individuals: 282
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variant carriers: 0

GenotypeDepth
all individuals: 312
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variant carriers: 0

GenotypeDepth
all individuals: 547
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variant carriers: 0

GenotypeDepth
all individuals: 552
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variant carriers: 0

GenotypeDepth
all individuals: 118
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GenotypeQuality
all individuals: 9783
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GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 1050
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 149
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2106
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 200
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variant carriers: 0

GenotypeQuality
all individuals: 401
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GenotypeQuality
all individuals: 129
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GenotypeQuality
all individuals: 256
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.510574018126888e-3
allele num: 1324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 5.17408e5

QD
type: SiteQuality
SIO_000300: 1.271e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.072e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeDepth
all individuals: 912
bin: 2.75e1
variant carriers: 7

GenotypeDepth
all individuals: 282
bin: 4.75e1
variant carriers: 4

GenotypeDepth
all individuals: 522
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variant carriers: 15

GenotypeDepth
all individuals: 3402
bin: 1.25e1
variant carriers: 37

GenotypeDepth
all individuals: 310
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variant carriers: 5

GenotypeDepth
all individuals: 192
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variant carriers: 6

GenotypeDepth
all individuals: 178
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
all individuals: 549
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 131

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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bin: 2.5e0
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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bin: 2.25e1
variant carriers: 15

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 14

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

African
type: Population
allele count: 128
allele frequency: 4.007514088916719e-2
allele num: 3194
num of homozygotes: 3

Other
type: Population
allele count: 1
allele frequency: 6.666666666666667e-3
allele num: 150
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.253796095444685e-3
allele num: 922
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.74e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.23867e5

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

VQSLOD
type: SiteQuality
SIO_000300: 5.31e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.563e1

GenotypeDepth
all individuals: 932
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variant carriers: 0

GenotypeDepth
all individuals: 313
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variant carriers: 0

GenotypeDepth
all individuals: 115
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 177
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GenotypeDepth
all individuals: 279
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 259
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GenotypeQuality
all individuals: 215
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.06e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.744e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.01e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.965000000000001e-1

FS
type: SiteQuality
SIO_000300: 7.499e0

DP
type: SiteQuality
SIO_000300: 5.263e5

GenotypeDepth
all individuals: 101
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 3408
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 313
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10492
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

African
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allele count: 1
allele frequency: 3.095975232198143e-4
allele num: 3230
num of homozygotes: 0

QD
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SIO_000300: 1.105e1

BaseQRankSum
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SIO_000300: -2.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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SIO_000300: -3.94e-2

MQ
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SIO_000300: 5.787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.27999e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11010
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
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SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.55e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 8.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.60409e5

VQSLOD
type: SiteQuality
SIO_000300: -1.19e0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.203473945409429e-4
allele num: 1612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 7.150518412584912e-4
allele num: 11188
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
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SIO_000300: 5.71609e5

InbreedingCoeff
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SIO_000300: -3.43e-2

BaseQRankSum
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SIO_000300: -6.889999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.464e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
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SIO_000300: -3.61e-1

FS
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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SIO_000300: -3.25e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

DP
type: SiteQuality
SIO_000300: 5.81463e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12370
num of homozygotes: 0

African
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allele count: 1
allele frequency: 2.801120448179272e-4
allele num: 3570
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 200
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ReadPosRankSum
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SIO_000300: 6.76e-1

BaseQRankSum
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ClippingRankSum
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MQRankSum
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SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 6.14861e5

InbreedingCoeff
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SIO_000300: -2.72e-2

VQSLOD
type: SiteQuality
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QD
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MQ
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