14-79746865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746865
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746865
    reference: chr 14
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.231C>T
  hgvsp: ENST00000428277.2:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.21C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.231C>T
  hgvsp: ENST00000555387.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186699C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.231C>T
  hgvsp: ENST00000281127.7:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186699C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.231C>T
  hgvsp: ENST00000557594.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186699C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17902
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser77Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

14-79746867-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746867
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746867
    reference: chr 14
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.233T>G
  hgvsp: ENSP00000281127.7:p.Leu78Arg
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.23T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.233T>G
  hgvsp: ENSP00000394426.2:p.Leu78Arg
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.233T>G
  hgvsp: ENSP00000451393.1:p.Leu78Arg
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186697T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.233T>G
  hgvsp: ENSP00000451672.1:p.Leu78Arg
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186697T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186697T>G
  variant of: http://identifiers.org/hgnc/8010
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17901
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51286
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu78Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-79746870-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746870
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746870
    reference: chr 14
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186694G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186694G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.26G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186694G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.236G>T
  hgvsp: ENSP00000281127.7:p.Arg79Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.236G>T
  hgvsp: ENSP00000394426.2:p.Arg79Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.236G>T
  hgvsp: ENSP00000451672.1:p.Arg79Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.236G>T
  hgvsp: ENSP00000451393.1:p.Arg79Leu
  variant of: http://identifiers.org/hgnc/8010
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17901
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg79Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

14-79746880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746880
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746880
    reference: chr 14
allele count: 9
allele frequency: 7.433716032047576e-5
allele num: 121070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.246C>T
  hgvsp: ENST00000557594.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.36C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186684C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.246C>T
  hgvsp: ENST00000555387.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.246C>T
  hgvsp: ENST00000281127.7:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.246C>T
  hgvsp: ENST00000428277.2:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186684C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186684C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17900
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: c.246C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

14-79746893-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746893
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746893
    reference: chr 14
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186671T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.247+12T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.247+12T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.37+12T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.247+12T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186671T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186671T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.247+12T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17898
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51286
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5329
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

14-79746895-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746895
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746895
    reference: chr 14
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.247+14C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186669C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.247+14C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186669C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.247+14C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.37+14C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186669C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.247+14C>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17897
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51286
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

14-79746917-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746917
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746917
    reference: chr 14
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.247+36A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186647A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.247+36A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.37+36A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186647A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186647A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.247+36A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.247+36A>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17898
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

14-79746918-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746918
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746918
    reference: chr 14
allele count: 1
allele frequency: 8.318083513558476e-6
allele num: 120220
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.37+37T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186646T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.247+37T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.247+37T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.247+37T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.247+37T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186646T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186646T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17897
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

14-79746932-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79746932
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79746932
    reference: chr 14
allele count: 3
allele frequency: 2.505135527832056e-5
allele num: 119754
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-186632C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.247+51C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-186632C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.247+51C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.247+51C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-186632C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.37+51C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.247+51C>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17897
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

14-79933515-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933515
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933515
    reference: chr 14
allele count: 1
allele frequency: 8.890785589814717e-6
allele num: 112476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-49T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-49T>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11706
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-79933516-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933516
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933516
    reference: chr 14
allele count: 1
allele frequency: 8.894106764857605e-6
allele num: 112434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-48G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-48G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/14-79933521-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933521
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933521
    reference: chr 14
allele count: 5
allele frequency: 4.444839541292559e-5
allele num: 112490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-43C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-43C>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18146
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5852
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

14-79933522-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933522
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933522
    reference: chr 14
allele count: 1
allele frequency: 8.882888004548038e-6
allele num: 112576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-42A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-42A>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9610
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

14-79933529-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933529
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933529
    reference: chr 14
allele count: 1
allele frequency: 8.872012349841191e-6
allele num: 112714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-35T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-35T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

14-79933531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933531
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933531
    reference: chr 14
allele count: 2
allele frequency: 1.773175402510816e-5
allele num: 112792
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-33C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-33C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18442
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4808
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

14-79933542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933542
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933542
    reference: chr 14
allele count: 1
allele frequency: 8.81849768073511e-6
allele num: 113398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-22C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-22C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-79933543-CCTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933543
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933539
    reference: chr 14
allele count: 1
allele frequency: 8.811193740527967e-6
allele num: 113492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-17_2144-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-17_248-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-17_248-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-17_115-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-17_248-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-17_2144-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-17_214-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-17_248-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-17_3230-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-17_100-14delTCTC
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: CCTCT
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-79933546-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933546
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933546
    reference: chr 14
allele count: 1
allele frequency: 8.789972399486666e-6
allele num: 113766
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-18C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-18C>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9604
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

14-79933549-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933549
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933549
    reference: chr 14
allele count: 4
allele frequency: 3.50594257266066e-5
allele num: 114092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-15T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-15T>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

14-79933554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933554
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933554
    reference: chr 14
allele count: 3
allele frequency: 2.619812770713986e-5
allele num: 114512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-10G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-10G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11896
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS

14-79933560-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933560
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933560
    reference: chr 14
allele count: 1
allele frequency: 8.684475631361379e-6
allele num: 115148
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2144-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.214-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.248-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.248-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2144-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3230-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.248-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.100-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.248-4G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.115-4G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 7.25e1
  variant carriers: 0
hgvs: c.2144-4G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum

14-79933569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933569
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933569
    reference: chr 14
allele count: 3
allele frequency: 2.568801054920966e-5
allele num: 116786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3235G>A
  hgvsp: ENSP00000450683.1:p.Ala1079Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.253G>A
  hgvsp: ENSP00000394426.2:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2149G>A
  hgvsp: ENSP00000338349.5:p.Ala717Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.253G>A
  hgvsp: ENSP00000281127.7:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.253G>A
  hgvsp: ENSP00000451393.1:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.253G>A
  hgvsp: ENSP00000451672.1:p.Ala85Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.219G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.120G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2149G>A
  hgvsp: ENSP00000451648.1:p.Ala717Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.105G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4831
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala717Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

14-79933569-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933569
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933569
    reference: chr 14
allele count: 3
allele frequency: 2.568801054920966e-5
allele num: 116786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3235G>C
  hgvsp: ENSP00000450683.1:p.Ala1079Pro
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.253G>C
  hgvsp: ENSP00000451393.1:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2149G>C
  hgvsp: ENSP00000451648.1:p.Ala717Pro
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.253G>C
  hgvsp: ENSP00000394426.2:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.219G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.253G>C
  hgvsp: ENSP00000281127.7:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.120G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2149G>C
  hgvsp: ENSP00000338349.5:p.Ala717Pro
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.105G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.253G>C
  hgvsp: ENSP00000451672.1:p.Ala85Pro
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala717Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

14-79933573-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933573
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933573
    reference: chr 14
allele count: 1
allele frequency: 8.510348583877996e-6
allele num: 117504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2153C>T
  hgvsp: ENSP00000338349.5:p.Thr718Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.223C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2153C>T
  hgvsp: ENSP00000451648.1:p.Thr718Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.124C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.257C>T
  hgvsp: ENSP00000451672.1:p.Thr86Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.257C>T
  hgvsp: ENSP00000281127.7:p.Thr86Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.257C>T
  hgvsp: ENSP00000394426.2:p.Thr86Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.109C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.257C>T
  hgvsp: ENSP00000451393.1:p.Thr86Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3239C>T
  hgvsp: ENSP00000450683.1:p.Thr1080Met
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4832
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr718Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

14-79933574-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933574
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933574
    reference: chr 14
allele count: 258
allele frequency: 2.18981819416388e-3
allele num: 117818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2154G>A
  hgvsp: ENST00000335750.5:c.2154G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.258G>A
  hgvsp: ENST00000557594.1:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.258G>A
  hgvsp: ENST00000555387.1:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.258G>A
  hgvsp: ENST00000281127.7:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3240G>A
  hgvsp: ENST00000554738.1:c.3240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.125G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.258G>A
  hgvsp: ENST00000428277.2:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.110G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2154G>A
  hgvsp: ENST00000554719.1:c.2154G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.224G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 11891
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 19177
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5840
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 9.25e1
  variant carriers: 2
hgvs: p.Thr718Thr
num of homozygotes: 4
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-79933578-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933578
    reference: chr 14
allele count: 1
allele frequency: 8.43340979624882e-6
allele num: 118576
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.262A>C
  hgvsp: ENSP00000451672.1:p.Ile88Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2158A>C
  hgvsp: ENSP00000338349.5:p.Ile720Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.129A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.262A>C
  hgvsp: ENSP00000281127.7:p.Ile88Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.114A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3244A>C
  hgvsp: ENSP00000450683.1:p.Ile1082Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.262A>C
  hgvsp: ENSP00000394426.2:p.Ile88Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.262A>C
  hgvsp: ENSP00000451393.1:p.Ile88Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.228A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2158A>C
  hgvsp: ENSP00000451648.1:p.Ile720Leu
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile720Leu
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

14-79933591-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933591
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933591
    reference: chr 14
allele count: 1
allele frequency: 8.343623802689983e-6
allele num: 119852
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2171G>A
  hgvsp: ENSP00000451648.1:p.Ser724Asn
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.275G>A
  hgvsp: ENSP00000394426.2:p.Ser92Asn
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.275G>A
  hgvsp: ENSP00000451393.1:p.Ser92Asn
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.142G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.241G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.127G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.275G>A
  hgvsp: ENSP00000281127.7:p.Ser92Asn
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2171G>A
  hgvsp: ENSP00000338349.5:p.Ser724Asn
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.275G>A
  hgvsp: ENSP00000451672.1:p.Ser92Asn
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3257G>A
  hgvsp: ENSP00000450683.1:p.Ser1086Asn
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser724Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-79933591-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933591
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933591
    reference: chr 14
allele count: 1
allele frequency: 8.343623802689983e-6
allele num: 119852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.275G>C
  hgvsp: ENSP00000451672.1:p.Ser92Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.275G>C
  hgvsp: ENSP00000394426.2:p.Ser92Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.275G>C
  hgvsp: ENSP00000451393.1:p.Ser92Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.142G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.275G>C
  hgvsp: ENSP00000281127.7:p.Ser92Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.241G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2171G>C
  hgvsp: ENSP00000338349.5:p.Ser724Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3257G>C
  hgvsp: ENSP00000450683.1:p.Ser1086Thr
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.127G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2171G>C
  hgvsp: ENSP00000451648.1:p.Ser724Thr
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser724Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

14-79933600-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933600
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933600
    reference: chr 14
allele count: 1
allele frequency: 8.301924386072691e-6
allele num: 120454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.136T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.284T>A
  hgvsp: ENSP00000451672.1:p.Leu95His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2180T>A
  hgvsp: ENSP00000451648.1:p.Leu727His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.284T>A
  hgvsp: ENSP00000281127.7:p.Leu95His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.284T>A
  hgvsp: ENSP00000394426.2:p.Leu95His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.250T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3266T>A
  hgvsp: ENSP00000450683.1:p.Leu1089His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.151T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2180T>A
  hgvsp: ENSP00000338349.5:p.Leu727His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.284T>A
  hgvsp: ENSP00000451393.1:p.Leu95His
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu727His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP

14-79933604-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933604
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933604
    reference: chr 14
allele count: 1
allele frequency: 8.288987251537607e-6
allele num: 120642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.288C>G
  hgvsp: ENSP00000281127.7:p.Ile96Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3270C>G
  hgvsp: ENSP00000450683.1:p.Ile1090Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.254C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.288C>G
  hgvsp: ENSP00000394426.2:p.Ile96Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2184C>G
  hgvsp: ENSP00000338349.5:p.Ile728Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.288C>G
  hgvsp: ENSP00000451393.1:p.Ile96Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.155C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.288C>G
  hgvsp: ENSP00000451672.1:p.Ile96Met
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.140C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2184C>G
  hgvsp: ENSP00000451648.1:p.Ile728Met
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile728Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

14-79933606-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933606
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933606
    reference: chr 14
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.290T>A
  hgvsp: ENSP00000451672.1:p.Leu97His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.142T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.290T>A
  hgvsp: ENSP00000451393.1:p.Leu97His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.157T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2186T>A
  hgvsp: ENSP00000338349.5:p.Leu729His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.290T>A
  hgvsp: ENSP00000281127.7:p.Leu97His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.256T>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2186T>A
  hgvsp: ENSP00000451648.1:p.Leu729His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3272T>A
  hgvsp: ENSP00000450683.1:p.Leu1091His
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.290T>A
  hgvsp: ENSP00000394426.2:p.Leu97His
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu729His
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

14-79933607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933607
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933607
    reference: chr 14
allele count: 3
allele frequency: 2.485130635033715e-5
allele num: 120718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.291C>T
  hgvsp: ENST00000555387.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.158C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.291C>T
  hgvsp: ENST00000281127.7:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.143C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3273C>T
  hgvsp: ENST00000554738.1:c.3273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2187C>T
  hgvsp: ENST00000554719.1:c.2187C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.291C>T
  hgvsp: ENST00000557594.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2187C>T
  hgvsp: ENST00000335750.5:c.2187C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.291C>T
  hgvsp: ENST00000428277.2:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.257C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu729Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

14-79933613-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933613
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933613
    reference: chr 14
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.149C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.297C>T
  hgvsp: ENST00000281127.7:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.297C>T
  hgvsp: ENST00000428277.2:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.297C>T
  hgvsp: ENST00000555387.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.263C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.297C>T
  hgvsp: ENST00000557594.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2193C>T
  hgvsp: ENST00000554719.1:c.2193C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2193C>T
  hgvsp: ENST00000335750.5:c.2193C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3279C>T
  hgvsp: ENST00000554738.1:c.3279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.164C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20009
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr731Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-79933640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933640
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933640
    reference: chr 14
allele count: 4
allele frequency: 3.300384494793644e-5
allele num: 121198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.324G>A
  hgvsp: ENST00000281127.7:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.290G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.176G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2220G>A
  hgvsp: ENST00000335750.5:c.2220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2220G>A
  hgvsp: ENST00000554719.1:c.2220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.324G>A
  hgvsp: ENST00000428277.2:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.324G>A
  hgvsp: ENST00000555387.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3306G>A
  hgvsp: ENST00000554738.1:c.3306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.324G>A
  hgvsp: ENST00000557594.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.191G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr740Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

14-79933658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933658
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933658
    reference: chr 14
allele count: 5
allele frequency: 4.124731892426992e-5
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.342C>T
  hgvsp: ENST00000557594.1:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2238C>T
  hgvsp: ENST00000335750.5:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.342C>T
  hgvsp: ENST00000428277.2:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.308C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3324C>T
  hgvsp: ENST00000554738.1:c.3324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2238C>T
  hgvsp: ENST00000554719.1:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.209C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.342C>T
  hgvsp: ENST00000555387.1:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.342C>T
  hgvsp: ENST00000281127.7:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.194C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala746Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

14-79933674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933674
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933674
    reference: chr 14
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.358A>G
  hgvsp: ENSP00000281127.7:p.Thr120Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.358A>G
  hgvsp: ENSP00000451393.1:p.Thr120Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.358A>G
  hgvsp: ENSP00000394426.2:p.Thr120Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2254A>G
  hgvsp: ENSP00000338349.5:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3340A>G
  hgvsp: ENSP00000450683.1:p.Thr1114Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.210A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.225A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2254A>G
  hgvsp: ENSP00000451648.1:p.Thr752Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.358A>G
  hgvsp: ENSP00000451672.1:p.Thr120Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.324A>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr752Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-79933697-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933697
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933697
    reference: chr 14
allele count: 1
allele frequency: 8.264872638312644e-6
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.248C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.233C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.381C>T
  hgvsp: ENST00000281127.7:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2277C>T
  hgvsp: ENST00000335750.5:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2277C>T
  hgvsp: ENST00000554719.1:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.381C>T
  hgvsp: ENST00000555387.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.381C>T
  hgvsp: ENST00000557594.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.347C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3363C>T
  hgvsp: ENST00000554738.1:c.3363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.381C>T
  hgvsp: ENST00000428277.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val759Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

14-79933712-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933712
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933712
    reference: chr 14
allele count: 1
allele frequency: 8.311722853913159e-6
allele num: 120312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3378T>C
  hgvsp: ENST00000554738.1:c.3378T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.396T>C
  hgvsp: ENST00000428277.2:c.396T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.396T>C
  hgvsp: ENST00000281127.7:c.396T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.396T>C
  hgvsp: ENST00000557594.1:c.396T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.362T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.396T>C
  hgvsp: ENST00000555387.1:c.396T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.248T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2292T>C
  hgvsp: ENST00000335750.5:c.2292T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2292T>C
  hgvsp: ENST00000554719.1:c.2292T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.263T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala764Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

14-79933715-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933715
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933715
    reference: chr 14
allele count: 1
allele frequency: 8.32639467110741e-6
allele num: 120100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.399A>G
  hgvsp: ENST00000428277.2:c.399A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.399A>G
  hgvsp: ENST00000557594.1:c.399A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3381A>G
  hgvsp: ENST00000554738.1:c.3381A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.251A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2295A>G
  hgvsp: ENST00000554719.1:c.2295A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2295A>G
  hgvsp: ENST00000335750.5:c.2295A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.399A>G
  hgvsp: ENST00000555387.1:c.399A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.399A>G
  hgvsp: ENST00000281127.7:c.399A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.266A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.365A>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro765Pro
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

14-79933739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933739
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933739
    reference: chr 14
allele count: 1
allele frequency: 8.453799983092399e-6
allele num: 118290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.389T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.423T>C
  hgvsp: ENST00000555387.1:c.423T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2319T>C
  hgvsp: ENST00000554719.1:c.2319T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.423T>C
  hgvsp: ENST00000557594.1:c.423T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.290T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2319T>C
  hgvsp: ENST00000335750.5:c.2319T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.423T>C
  hgvsp: ENST00000281127.7:c.423T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.423T>C
  hgvsp: ENST00000428277.2:c.423T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.275T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3405T>C
  hgvsp: ENST00000554738.1:c.3405T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu773Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/14-79933743-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933743
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933743
    reference: chr 14
allele count: 1
allele frequency: 8.476012883539584e-6
allele num: 117980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.279A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.427A>C
  hgvsp: ENSP00000451393.1:p.Ile143Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2323A>C
  hgvsp: ENSP00000338349.5:p.Ile775Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.294A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3409A>C
  hgvsp: ENSP00000450683.1:p.Ile1137Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.393A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.427A>C
  hgvsp: ENSP00000394426.2:p.Ile143Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2323A>C
  hgvsp: ENSP00000451648.1:p.Ile775Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.427A>C
  hgvsp: ENSP00000281127.7:p.Ile143Leu
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.427A>C
  hgvsp: ENSP00000451672.1:p.Ile143Leu
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile775Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

14-79933747-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933747
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933747
    reference: chr 14
allele count: 80
allele frequency: 6.830251182487236e-4
allele num: 117126
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+2T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+2T>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 3.25e1
  variant carriers: 3
hgvs: c.2325+2T>G
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

14-79933756-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933756
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933756
    reference: chr 14
allele count: 1
allele frequency: 8.578978072132047e-6
allele num: 116564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+11G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+11G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4801
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

14-79933758-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933758
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933758
    reference: chr 14
allele count: 1
allele frequency: 8.598452278589854e-6
allele num: 116300
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+13C>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+13C>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

14-79933762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933762
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933762
    reference: chr 14
allele count: 1
allele frequency: 8.627532180695034e-6
allele num: 115908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+17G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+17G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11892
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20828
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

14-79933767-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933767
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933767
    reference: chr 14
allele count: 1
allele frequency: 8.670770831526923e-6
allele num: 115330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+22G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+22G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9350
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

14-79933767-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933767
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933767
    reference: chr 14
allele count: 3
allele frequency: 2.601231249458077e-5
allele num: 115330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+22G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+22G>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7620
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ

14-79933768-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933768
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933768
    reference: chr 14
allele count: 5
allele frequency: 4.338018393197987e-5
allele num: 115260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+23G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+23G>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18386
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4743
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

14-79933775-TTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933775
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933773
    reference: chr 14
allele count: 5
allele frequency: 4.357982079977687e-5
allele num: 114732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+32_395+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+32_429+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+32_2325+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+32_429+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+32_3411+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+32_2325+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+32_281+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+32_429+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+32_296+33delAT
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+32_429+33delAT
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11249
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17488
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3781
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: TTA
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/14-79933777-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933777
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933777
    reference: chr 14
allele count: 1
allele frequency: 8.732556717955883e-6
allele num: 114514
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+32A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+32A>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-79933778-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933778
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933778
    reference: chr 14
allele count: 1
allele frequency: 8.74630468627005e-6
allele num: 114334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+33T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+33T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

14-79933783-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933783
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933783
    reference: chr 14
allele count: 1
allele frequency: 8.78981787497363e-6
allele num: 113768
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+38C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+38C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15441
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

14-79933784-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933784
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933784
    reference: chr 14
allele count: 3
allele frequency: 2.634675847048285e-5
allele num: 113866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+39T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+39T>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10509
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-79933786-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933786
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933786
    reference: chr 14
allele count: 1
allele frequency: 8.800957544180806e-6
allele num: 113624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+41G>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+41G>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

14-79933789-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933789
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933789
    reference: chr 14
allele count: 1
allele frequency: 8.827839474566994e-6
allele num: 113278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+44G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+44G>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9721
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6307
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

14-79933793-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933793
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933793
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 113032
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+48G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+48G>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 12793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2685
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-79933794-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 79933794
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 79933794
    reference: chr 14
allele count: 12
allele frequency: 1.060857880405955e-4
allele num: 113116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.429+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.429+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.395+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2325+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2325+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.429+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3411+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.429+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.281+49A>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000553803
  gene symbol: NRXN3
  hgvsc: ENST00000553803.1:n.296+49A>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12669
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9509
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

14-80130075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130075
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130075
    reference: chr 14
allele count: 1
allele frequency: 1.258178158027177e-5
allele num: 79480
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1953G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-46C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-46C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20598
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8061
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14798
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

14-80130078-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130078
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130078
    reference: chr 14
allele count: 3
allele frequency: 3.767708228674771e-5
allele num: 79624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1956G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-43C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-43C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20578
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

14-80130083-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130083
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130083
    reference: chr 14
allele count: 1
allele frequency: 1.231072263941893e-5
allele num: 81230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1961A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-38T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-38T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8368
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

14-80130084-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130084
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130084
    reference: chr 14
allele count: 1
allele frequency: 1.228108957826738e-5
allele num: 81426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1962A>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-37T>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-37T>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

14-80130089-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130089
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130089
    reference: chr 14
allele count: 2
allele frequency: 2.411614334635605e-5
allele num: 82932
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1967T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-32A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-32A>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

14-80130093-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130093
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130093
    reference: chr 14
allele count: 1
allele frequency: 1.187056337693787e-5
allele num: 84242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1971G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-28C>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-28C>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15028
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

14-80130095-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130095
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130095
    reference: chr 14
allele count: 5
allele frequency: 5.860565427352431e-5
allele num: 85316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1973T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-26A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-26A>G
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18300
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/14-80130098-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130098
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130098
    reference: chr 14
allele count: 1
allele frequency: 1.150615579334944e-5
allele num: 86910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1976G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-23C>A
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-23C>A
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17338
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP

14-80130104-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130104
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130104
    reference: chr 14
allele count: 1
allele frequency: 1.100715465052284e-5
allele num: 90850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1982C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-17G>T
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-17G>T
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-80130114-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130114
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130114
    reference: chr 14
allele count: 4
allele frequency: 4.083882955914484e-5
allele num: 97946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-7A>G
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1992T>C
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
hgvs: c.2326-7A>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

14-80130118-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130118
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130118
    reference: chr 14
allele count: 1
allele frequency: 9.834582325288644e-6
allele num: 101682
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-1996A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.396-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.430-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.430-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2326-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.282-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2326-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.430-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3412-3T>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.430-3T>C
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2326-3T>C
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-80130137-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 80130137
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 80130137
    reference: chr 14
allele count: 1
allele frequency: 8.875634607874463e-6
allele num: 112668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000556003
  gene symbol: NRXN3
  hgvsc: ENST00000556003.1:n.298G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021645
  ensembl transcript: ENST00000555073
  gene symbol: NRXN3
  hgvsc: ENST00000555073.1:n.412G>C
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000338349
  ensembl transcript: ENST00000335750
  gene symbol: NRXN3
  hgvsc: ENST00000335750.5:c.2342G>C
  hgvsp: ENSP00000338349.5:p.Gly781Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000450683
  ensembl transcript: ENST00000554738
  gene symbol: NRXN3
  hgvsc: ENST00000554738.1:c.3428G>C
  hgvsp: ENSP00000450683.1:p.Gly1143Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451648
  ensembl transcript: ENST00000554719
  gene symbol: NRXN3
  hgvsc: ENST00000554719.1:c.2342G>C
  hgvsp: ENSP00000451648.1:p.Gly781Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258637
  ensembl transcript: ENST00000553322
  gene symbol: RP11-242P2.1
  hgvsc: ENST00000553322.1:n.281-2015C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000394426
  ensembl transcript: ENST00000428277
  gene symbol: NRXN3
  hgvsc: ENST00000428277.2:c.446G>C
  hgvsp: ENSP00000394426.2:p.Gly149Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000281127
  ensembl transcript: ENST00000281127
  gene symbol: NRXN3
  hgvsc: ENST00000281127.7:c.446G>C
  hgvsp: ENSP00000281127.7:p.Gly149Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451393
  ensembl transcript: ENST00000555387
  gene symbol: NRXN3
  hgvsc: ENST00000555387.1:c.446G>C
  hgvsp: ENSP00000451393.1:p.Gly149Ala
  variant of: http://identifiers.org/hgnc/8010
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021645
  ensembl protein: ENSP00000451672
  ensembl transcript: ENST00000557594
  gene symbol: NRXN3
  hgvsc: ENST00000557594.1:c.446G>C
  hgvsp: ENSP00000451672.1:p.Gly149Ala
  variant of: http://identifiers.org/hgnc/8010
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly781Ala
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 222
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.314e1

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 5.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

DP
type: SiteQuality
SIO_000300: 4.881405e6

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.647e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.024e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6598
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.3e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: -6.221e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.401e1

FS
type: SiteQuality
SIO_000300: 2.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 4.881094e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.399999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
all individuals: 51286
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.51e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.446e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 3.707e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 7.68e-1

DP
type: SiteQuality
SIO_000300: 4.88048e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51288
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.05143721633888e-4
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.102770657878677e-5
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505316273202379e-5
allele num: 66588
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.213e1

DP
type: SiteQuality
SIO_000300: 4.876385e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 2.587e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

GenotypeQuality
all individuals: 336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.681e0

VQSLOD
type: SiteQuality
SIO_000300: -8.119e-1

DP
type: SiteQuality
SIO_000300: 4.865374e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

FS
type: SiteQuality
SIO_000300: 1.409e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.93e-1

GenotypeQuality
all individuals: 803
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.262e1

FS
type: SiteQuality
SIO_000300: 3.341e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

DP
type: SiteQuality
SIO_000300: 4.862605e6

VQSLOD
type: SiteQuality
SIO_000300: 9.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51285
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 872
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

FS
type: SiteQuality
SIO_000300: 2.709e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 4.836049e6

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

GenotypeQuality
all individuals: 302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51285
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508295625942685e-5
allele num: 66300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 4.835243e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e0

FS
type: SiteQuality
SIO_000300: 7.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.622e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 244
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 512
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511807214344027e-5
allele num: 66146
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.329373398555789e-4
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 4.830092e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

FS
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

QD
type: SiteQuality
SIO_000300: 1.524e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
all individuals: 1084
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1909
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 493
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variant carriers: 0

GenotypeQuality
all individuals: 9623
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555355087566491e-5
allele num: 64294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.086e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.805503e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.954e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 18023
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9618
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 915
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555839064007219e-5
allele num: 64274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.392e0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -4.967e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.64e-1

DP
type: SiteQuality
SIO_000300: 1.806828e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
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variant carriers: 0

GenotypeQuality
all individuals: 561
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GenotypeQuality
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GenotypeQuality
all individuals: 7811
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 711
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GenotypeQuality
all individuals: 9613
bin: 9.75e1
variant carriers: 5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.776049766718506e-5
allele num: 64300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.813162e6

FS
type: SiteQuality
SIO_000300: 1.0717e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.668e0

QD
type: SiteQuality
SIO_000300: 1.376e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.442e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

GenotypeQuality
all individuals: 239
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 811
bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
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variant carriers: 0

GenotypeQuality
all individuals: 7848
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64330
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.811616954474098e-5
allele num: 10192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.033e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 2.157e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-2

DP
type: SiteQuality
SIO_000300: 1.814408e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 1.267e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.266e0

GenotypeQuality
all individuals: 1706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 538
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GenotypeQuality
all individuals: 9608
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variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553470452991984e-5
allele num: 64372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 1.821247e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e-1

QD
type: SiteQuality
SIO_000300: 2.03e1

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2974
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
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variant carriers: 0

GenotypeQuality
all individuals: 328
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 668
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3278
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9607
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64380
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.803921568627451e-5
allele num: 10200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.782e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.515e0

FS
type: SiteQuality
SIO_000300: 1.4284e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 1.824018e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548371113588505e-5
allele num: 64584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.244e1

DP
type: SiteQuality
SIO_000300: 1.834364e6

FS
type: SiteQuality
SIO_000300: 6.511e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.865e0

VQSLOD
type: SiteQuality
SIO_000300: -2.459e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.457e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

DP
type: SiteQuality
SIO_000300: 1.835472e6

FS
type: SiteQuality
SIO_000300: 2.742e0

QD
type: SiteQuality
SIO_000300: 1.075e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.837887e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: -8.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.865e0

FS
type: SiteQuality
SIO_000300: 1.419e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.765e0

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9607
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.480076561684357e-4
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64784
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.840959e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.703e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.9e0

QD
type: SiteQuality
SIO_000300: 1.047e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 1.2961e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7967
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.608242044861763e-4
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.846033e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.507e0

MQ
type: SiteQuality
SIO_000300: 5.846e1

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.655e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

FS
type: SiteQuality
SIO_000300: 4.933e0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.164598301763554e-5
allele num: 12248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

QD
type: SiteQuality
SIO_000300: 1.277e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.77e0

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.852111e6

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 215
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.600554785020804e-4
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.867751e6

QD
type: SiteQuality
SIO_000300: 1.22e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23379
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.58099193745419e-5
allele num: 65488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.867751e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 3315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522997258604934e-5
allele num: 65660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.535e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.48e-1

InbreedingCoeff
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SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.924e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 4.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.875112e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.998e0

GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 248

GenotypeQuality
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GenotypeQuality
all individuals: 188
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.900792883388126e-4
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.127418765972983e-5
allele num: 65736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 246
allele frequency: 1.747407302173604e-2
allele num: 14078
num of homozygotes: 4

Other
type: Population
allele count: 3
allele frequency: 3.416856492027335e-3
allele num: 878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

QD
type: SiteQuality
SIO_000300: 1.289e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.883194e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.05e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 232
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GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65930
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

DP
type: SiteQuality
SIO_000300: 1.88446e6

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1708
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50952510340247e-5
allele num: 66246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 1.898471e6

FS
type: SiteQuality
SIO_000300: 3.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.301e1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

BaseQRankSum
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SIO_000300: -1.881e0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 3.249e0

DP
type: SiteQuality
SIO_000300: 1.898471e6

VQSLOD
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MQRankSum
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SIO_000300: 2.09e-1

MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.595e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.948e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.11e-1

MQRankSum
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SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.905709e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66468
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.227425582264292e-5
allele num: 16058
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.149e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 6.795e0

DP
type: SiteQuality
SIO_000300: 1.908211e6

ClippingRankSum
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SIO_000300: -2.802e0

QD
type: SiteQuality
SIO_000300: 1.105e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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DP
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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East Asian
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Other
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Latino
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European (Non-Finnish)
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FS
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InbreedingCoeff
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DP
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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Latino
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East Asian
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South Asian
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African
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European (Non-Finnish)
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ReadPosRankSum
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MQ
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FS
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DP
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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Other
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African
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European (Finnish)
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BaseQRankSum
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QD
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VQSLOD
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FS
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Other
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European (Finnish)
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Latino
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FS
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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MQ
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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FS
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SIO_000300: 5.537e0

DP
type: SiteQuality
SIO_000300: 1.897389e6

VQSLOD
type: SiteQuality
SIO_000300: -1.901e-1

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8222
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9493
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50779530170984e-5
allele num: 66322
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e-1

DP
type: SiteQuality
SIO_000300: 1.893843e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.71e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

GenotypeQuality
all individuals: 9491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2617
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23281
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8023
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3290
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2458
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52012647452268e-5
allele num: 65784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

FS
type: SiteQuality
SIO_000300: 1.002e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.165e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

DP
type: SiteQuality
SIO_000300: 1.865933e6

QD
type: SiteQuality
SIO_000300: 1.327e1

GenotypeDepth
all individuals: 43
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4815
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variant carriers: 0

GenotypeQuality
all individuals: 9491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2896
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8007
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variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3703
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variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.86062e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.612e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

QD
type: SiteQuality
SIO_000300: 1.436e1

GenotypeQuality
all individuals: 7948
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3699
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3202
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 9213
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 22397
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4788
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2449
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3265
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1698
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 506
bin: 2.75e1
variant carriers: 1

Other
type: Population
allele count: 1
allele frequency: 1.15473441108545e-3
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13936
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 8.57029169599951e-4
allele num: 65342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 2.1484375e-3
allele num: 10240
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 4.0968e1

VQSLOD
type: SiteQuality
SIO_000300: -8.589e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.541e0

MQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

QD
type: SiteQuality
SIO_000300: 4.7e-1

DP
type: SiteQuality
SIO_000300: 1.871134e6

GenotypeQuality
all individuals: 680
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9360
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3732
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21350
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
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variant carriers: 0

GenotypeQuality
all individuals: 7877
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530784067599424e-5
allele num: 65326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13368
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 1.829572e6

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 5.797e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.567e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e0

GenotypeQuality
all individuals: 57
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
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variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
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variant carriers: 0

GenotypeQuality
all individuals: 4798
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variant carriers: 0

GenotypeQuality
all individuals: 332
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variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.695559433779329e-5
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.96e-1

FS
type: SiteQuality
SIO_000300: 1.016e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 1.827801e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 2482
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7758
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
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GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4785
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variant carriers: 0

GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 174
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
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variant carriers: 0

GenotypeQuality
all individuals: 3706
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 417
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variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534966537729477e-5
allele num: 65148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.819444e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.568e0

QD
type: SiteQuality
SIO_000300: 4.54e0

VQSLOD
type: SiteQuality
SIO_000300: -1.778e0

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

GenotypeQuality
all individuals: 848
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7620
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variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
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variant carriers: 0

GenotypeQuality
all individuals: 4757
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variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12634
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.713837574067619e-5
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64966
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.548e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

DP
type: SiteQuality
SIO_000300: 1.806643e6

FS
type: SiteQuality
SIO_000300: 4.842e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 20079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.617800080041868e-5
allele num: 64966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.806643e6

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.548e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

FS
type: SiteQuality
SIO_000300: 4.842e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.88e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.584951456310679e-4
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

QD
type: SiteQuality
SIO_000300: 1.616e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.167e0

DP
type: SiteQuality
SIO_000300: 1.803353e6

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.076308495026904e-4
allele num: 12266
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
type: SiteQuality
SIO_000300: 1.778643e6

QD
type: SiteQuality
SIO_000300: 1.94e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64766
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.733624454148471e-5
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12106
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 1.803e1

DP
type: SiteQuality
SIO_000300: 1.769996e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545499505440158e-5
allele num: 64704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.073e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.19e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 5.546e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.554e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549138678894535e-5
allele num: 64552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.1e-3

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.839e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.559290223511346e-4
allele num: 11722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
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MQRankSum
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MQ
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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SIO_000300: 4.4e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550628004341758e-5
allele num: 64490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.983e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.033e1

DP
type: SiteQuality
SIO_000300: 1.727944e6

FS
type: SiteQuality
SIO_000300: 3.68e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: -1.517e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.383e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11043
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.79431929480901e-5
allele num: 10210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64382
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.915e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.954e0

QD
type: SiteQuality
SIO_000300: 1.464e1

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64302
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.12e-1

QD
type: SiteQuality
SIO_000300: 7.69e0

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

DP
type: SiteQuality
SIO_000300: 1.708626e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.804e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.422812425895186e-3
allele num: 8434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.03e0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

DP
type: SiteQuality
SIO_000300: 1.707364e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.277e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.635e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.93814801573114e-5
allele num: 11188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41980
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.036e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.823e0

QD
type: SiteQuality
SIO_000300: 3.96e0

DP
type: SiteQuality
SIO_000300: 9.93451e5

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.336541031809677e-4
allele num: 7482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.754433509247373e-5
allele num: 42066
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42910
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.809627216793341e-4
allele num: 5526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4804
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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MQRankSum
type: SiteQuality
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DP
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQ
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InbreedingCoeff
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SIO_000300: -2.2e-3

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: -1.256e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.325689566956603e-5
allele num: 42998
num of homozygotes: 0

Other
type: Population
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South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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MQ
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FS
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 2
allele frequency: 2.555583950932788e-4
allele num: 7826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43780
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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African
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Other
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.247090018426138e-5
allele num: 44502
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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FS
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MQ
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DP
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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South Asian
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allele frequency: 4.119973632168754e-4
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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InbreedingCoeff
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DP
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MQRankSum
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FS
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BaseQRankSum
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QD
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MQ
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.180454406698356e-5
allele num: 45862
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.866e1

ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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SIO_000300: 1.711e0

DP
type: SiteQuality
SIO_000300: 1.175465e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 7.691124442393478e-5
allele num: 13002
num of homozygotes: 0

Other
type: Population
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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DP
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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Other
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European (Non-Finnish)
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Latino
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African
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East Asian
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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