http://identifiers.org/exac.variant/10-123843757-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843757
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843757
    reference: chr 10
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33692A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33692A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1742A>C
  hgvsp: ENSP00000427618.1:p.Glu581Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1742A>C
  hgvsp: ENSP00000358001.1:p.Glu581Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1742A>C
  hgvsp: ENSP00000334280.2:p.Glu581Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1742A>C
  hgvsp: ENSP00000424467.1:p.Glu581Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1742A>C
  hgvsp: ENSP00000395048.2:p.Glu581Ala
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6877
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6482
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3502
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu581Ala
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-123843758-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843758
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843758
    reference: chr 10
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1743A>C
  hgvsp: ENSP00000334280.2:p.Glu581Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33693A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1743A>C
  hgvsp: ENSP00000358001.1:p.Glu581Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1743A>C
  hgvsp: ENSP00000395048.2:p.Glu581Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1743A>C
  hgvsp: ENSP00000427618.1:p.Glu581Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1743A>C
  hgvsp: ENSP00000424467.1:p.Glu581Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33693A>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3500
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu581Asp
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

10-123843774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843774
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843774
    reference: chr 10
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1759G>A
  hgvsp: ENSP00000358001.1:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1759G>A
  hgvsp: ENSP00000395048.2:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1759G>A
  hgvsp: ENSP00000427618.1:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33709G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33709G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1759G>A
  hgvsp: ENSP00000424467.1:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1759G>A
  hgvsp: ENSP00000334280.2:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6480
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9951
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp587Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-123843775-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843775
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843775
    reference: chr 10
allele count: 81
allele frequency: 6.686257676814369e-4
allele num: 121144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1760A>G
  hgvsp: ENSP00000395048.2:p.Asp587Gly
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33710A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33710A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1760A>G
  hgvsp: ENSP00000424467.1:p.Asp587Gly
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1760A>G
  hgvsp: ENSP00000358001.1:p.Asp587Gly
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1760A>G
  hgvsp: ENSP00000427618.1:p.Asp587Gly
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1760A>G
  hgvsp: ENSP00000334280.2:p.Asp587Gly
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20878
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13482
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9946
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp587Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

10-123843777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843777
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843777
    reference: chr 10
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33712G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1762G>A
  hgvsp: ENSP00000427618.1:p.Gly588Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1762G>A
  hgvsp: ENSP00000358001.1:p.Gly588Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1762G>A
  hgvsp: ENSP00000395048.2:p.Gly588Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1762G>A
  hgvsp: ENSP00000424467.1:p.Gly588Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1762G>A
  hgvsp: ENSP00000334280.2:p.Gly588Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33712G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6463
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly588Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-123843778-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843778
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843778
    reference: chr 10
allele count: 37
allele frequency: 3.054569470816478e-4
allele num: 121130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1763G>T
  hgvsp: ENSP00000395048.2:p.Gly588Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1763G>T
  hgvsp: ENSP00000334280.2:p.Gly588Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33713G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1763G>T
  hgvsp: ENSP00000424467.1:p.Gly588Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33713G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1763G>T
  hgvsp: ENSP00000427618.1:p.Gly588Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1763G>T
  hgvsp: ENSP00000358001.1:p.Gly588Val
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13488
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4788
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4807
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly588Val
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

10-123843781-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843781
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843781
    reference: chr 10
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33716G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1766G>C
  hgvsp: ENSP00000395048.2:p.Gly589Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1766G>C
  hgvsp: ENSP00000424467.1:p.Gly589Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1766G>C
  hgvsp: ENSP00000427618.1:p.Gly589Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1766G>C
  hgvsp: ENSP00000358001.1:p.Gly589Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1766G>C
  hgvsp: ENSP00000334280.2:p.Gly589Ala
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33716G>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4791
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6458
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly589Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-123843786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843786
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843786
    reference: chr 10
allele count: 2
allele frequency: 1.65128222064433e-5
allele num: 121118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33721C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1771C>T
  hgvsp: ENSP00000358001.1:p.Pro591Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1771C>T
  hgvsp: ENSP00000395048.2:p.Pro591Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1771C>T
  hgvsp: ENSP00000427618.1:p.Pro591Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33721C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1771C>T
  hgvsp: ENSP00000424467.1:p.Pro591Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1771C>T
  hgvsp: ENSP00000334280.2:p.Pro591Ser
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4791
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9949
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro591Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

10-123843791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843791
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843791
    reference: chr 10
allele count: 2
allele frequency: 1.651554938975045e-5
allele num: 121098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1776G>A
  hgvsp: ENST00000334433.3:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1776G>A
  hgvsp: ENST00000515273.1:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1776G>A
  hgvsp: ENST00000453444.2:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33726G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1776G>A
  hgvsp: ENST00000369005.1:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33726G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1776G>A
  hgvsp: ENST00000515603.1:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13505
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9948
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly592Gly
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

10-123843795-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843795
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843795
    reference: chr 10
allele count: 1
allele frequency: 8.258456659619451e-6
allele num: 121088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1780C>G
  hgvsp: ENSP00000427618.1:p.Leu594Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33730C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1780C>G
  hgvsp: ENSP00000395048.2:p.Leu594Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1780C>G
  hgvsp: ENSP00000424467.1:p.Leu594Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33730C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1780C>G
  hgvsp: ENSP00000334280.2:p.Leu594Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1780C>G
  hgvsp: ENSP00000358001.1:p.Leu594Val
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu594Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

10-123843809-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843809
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843809
    reference: chr 10
allele count: 3
allele frequency: 2.478970070568015e-5
allele num: 121018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33744C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1794C>T
  hgvsp: ENST00000453444.2:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1794C>T
  hgvsp: ENST00000515603.1:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1794C>T
  hgvsp: ENST00000515273.1:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33744C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1794C>T
  hgvsp: ENST00000334433.3:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1794C>T
  hgvsp: ENST00000369005.1:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26700
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9936
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp598Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-123843811-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843811
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843811
    reference: chr 10
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1796C>A
  hgvsp: ENSP00000395048.2:p.Ser599Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1796C>A
  hgvsp: ENSP00000358001.1:p.Ser599Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33746C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1796C>A
  hgvsp: ENSP00000427618.1:p.Ser599Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1796C>A
  hgvsp: ENSP00000424467.1:p.Ser599Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33746C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1796C>A
  hgvsp: ENSP00000334280.2:p.Ser599Tyr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13484
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6455
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4798
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser599Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-123843827-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843827
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843827
    reference: chr 10
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1812C>A
  hgvsp: ENSP00000334280.2:p.Ser604Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1812C>A
  hgvsp: ENSP00000395048.2:p.Ser604Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1812C>A
  hgvsp: ENSP00000424467.1:p.Ser604Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33762C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33762C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1812C>A
  hgvsp: ENSP00000427618.1:p.Ser604Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1812C>A
  hgvsp: ENSP00000358001.1:p.Ser604Arg
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4786
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser604Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/10-123843828-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843828
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843828
    reference: chr 10
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33763A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1813A>C
  hgvsp: ENSP00000395048.2:p.Lys605Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1813A>C
  hgvsp: ENSP00000427618.1:p.Lys605Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33763A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1813A>C
  hgvsp: ENSP00000424467.1:p.Lys605Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1813A>C
  hgvsp: ENSP00000334280.2:p.Lys605Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1813A>C
  hgvsp: ENSP00000358001.1:p.Lys605Gln
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11007
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4781
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9892
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys605Gln
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-123843831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843831
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843831
    reference: chr 10
allele count: 3
allele frequency: 2.48245730173441e-5
allele num: 120848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33766C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33766C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1816C>T
  hgvsp: ENSP00000358001.1:p.Arg606Cys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1816C>T
  hgvsp: ENSP00000427618.1:p.Arg606Cys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1816C>T
  hgvsp: ENSP00000424467.1:p.Arg606Cys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1816C>T
  hgvsp: ENSP00000395048.2:p.Arg606Cys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1816C>T
  hgvsp: ENSP00000334280.2:p.Arg606Cys
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3481
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6453
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg606Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-123843832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843832
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843832
    reference: chr 10
allele count: 4
allele frequency: 3.3101621979477e-5
allele num: 120840
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1817G>A
  hgvsp: ENSP00000358001.1:p.Arg606His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1817G>A
  hgvsp: ENSP00000334280.2:p.Arg606His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1817G>A
  hgvsp: ENSP00000427618.1:p.Arg606His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33767G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1817G>A
  hgvsp: ENSP00000395048.2:p.Arg606His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1817G>A
  hgvsp: ENSP00000424467.1:p.Arg606His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33767G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6452
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 9878
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4773
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4779
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26577
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg606His
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

10-123843834-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843834
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843834
    reference: chr 10
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1819G>A
  hgvsp: ENSP00000427618.1:p.Asp607Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33769G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1819G>A
  hgvsp: ENSP00000358001.1:p.Asp607Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1819G>A
  hgvsp: ENSP00000424467.1:p.Asp607Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33769G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1819G>A
  hgvsp: ENSP00000334280.2:p.Asp607Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1819G>A
  hgvsp: ENSP00000395048.2:p.Asp607Asn
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp607Asn
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-123843837-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843837
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843837
    reference: chr 10
allele count: 1
allele frequency: 8.279790686891435e-6
allele num: 120776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33772C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1822C>A
  hgvsp: ENSP00000427618.1:p.Pro608Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1822C>A
  hgvsp: ENSP00000395048.2:p.Pro608Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1822C>A
  hgvsp: ENSP00000334280.2:p.Pro608Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33772C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1822C>A
  hgvsp: ENSP00000424467.1:p.Pro608Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1822C>A
  hgvsp: ENSP00000358001.1:p.Pro608Thr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9880
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro608Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

10-123843838-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843838
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843838
    reference: chr 10
allele count: 2
allele frequency: 1.656424442199069e-5
allele num: 120742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1823C>G
  hgvsp: ENSP00000395048.2:p.Pro608Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33773C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1823C>G
  hgvsp: ENSP00000334280.2:p.Pro608Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33773C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1823C>G
  hgvsp: ENSP00000424467.1:p.Pro608Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1823C>G
  hgvsp: ENSP00000427618.1:p.Pro608Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1823C>G
  hgvsp: ENSP00000358001.1:p.Pro608Arg
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4776
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4768
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26385
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro608Arg
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

10-123843864-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843864
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843864
    reference: chr 10
allele count: 2
allele frequency: 1.660577881102624e-5
allele num: 120440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1849A>G
  hgvsp: ENSP00000424467.1:p.Lys617Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1849A>G
  hgvsp: ENSP00000358001.1:p.Lys617Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1849A>G
  hgvsp: ENSP00000334280.2:p.Lys617Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33799A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33799A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1849A>G
  hgvsp: ENSP00000395048.2:p.Lys617Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1849A>G
  hgvsp: ENSP00000427618.1:p.Lys617Glu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys617Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-123843867-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843867
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843867
    reference: chr 10
allele count: 2
allele frequency: 1.661571181709424e-5
allele num: 120368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33802C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1852C>A
  hgvsp: ENSP00000424467.1:p.Pro618Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33802C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1852C>A
  hgvsp: ENSP00000427618.1:p.Pro618Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1852C>A
  hgvsp: ENSP00000395048.2:p.Pro618Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1852C>A
  hgvsp: ENSP00000334280.2:p.Pro618Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1852C>A
  hgvsp: ENSP00000358001.1:p.Pro618Thr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3467
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6446
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro618Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/10-123843868-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843868
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843868
    reference: chr 10
allele count: 1
allele frequency: 8.308684236764266e-6
allele num: 120356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1853C>A
  hgvsp: ENSP00000334280.2:p.Pro618Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33803C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1853C>A
  hgvsp: ENSP00000358001.1:p.Pro618Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1853C>A
  hgvsp: ENSP00000427618.1:p.Pro618Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1853C>A
  hgvsp: ENSP00000424467.1:p.Pro618Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1853C>A
  hgvsp: ENSP00000395048.2:p.Pro618Gln
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33803C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4730
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3465
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro618Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

10-123843868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843868
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843868
    reference: chr 10
allele count: 4
allele frequency: 3.323473694705706e-5
allele num: 120356
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1853C>T
  hgvsp: ENSP00000358001.1:p.Pro618Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1853C>T
  hgvsp: ENSP00000424467.1:p.Pro618Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1853C>T
  hgvsp: ENSP00000395048.2:p.Pro618Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1853C>T
  hgvsp: ENSP00000334280.2:p.Pro618Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33803C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1853C>T
  hgvsp: ENSP00000427618.1:p.Pro618Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33803C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro618Leu
num of homozygotes: 1
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

10-123843871-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843871
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843871
    reference: chr 10
allele count: 2
allele frequency: 1.662482751741451e-5
allele num: 120302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1856G>A
  hgvsp: ENSP00000427618.1:p.Ser619Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1856G>A
  hgvsp: ENSP00000395048.2:p.Ser619Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33806G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1856G>A
  hgvsp: ENSP00000358001.1:p.Ser619Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1856G>A
  hgvsp: ENSP00000424467.1:p.Ser619Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1856G>A
  hgvsp: ENSP00000334280.2:p.Ser619Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33806G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25634
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4726
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser619Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

10-123843872-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843872
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843872
    reference: chr 10
allele count: 1
allele frequency: 8.313934153641504e-6
allele num: 120280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1857C>G
  hgvsp: ENSP00000427618.1:p.Ser619Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1857C>G
  hgvsp: ENSP00000424467.1:p.Ser619Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1857C>G
  hgvsp: ENSP00000395048.2:p.Ser619Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1857C>G
  hgvsp: ENSP00000334280.2:p.Ser619Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33807C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1857C>G
  hgvsp: ENSP00000358001.1:p.Ser619Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33807C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4710
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser619Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

10-123843874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843874
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843874
    reference: chr 10
allele count: 66
allele frequency: 5.488382922813379e-4
allele num: 120254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33809G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1859G>A
  hgvsp: ENSP00000334280.2:p.Ser620Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1859G>A
  hgvsp: ENSP00000358001.1:p.Ser620Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1859G>A
  hgvsp: ENSP00000424467.1:p.Ser620Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1859G>A
  hgvsp: ENSP00000427618.1:p.Ser620Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1859G>A
  hgvsp: ENSP00000395048.2:p.Ser620Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33809G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13271
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20448
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10664
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25761
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6473
  bin: 9.75e1
  variant carriers: 64
hgvs: p.Ser620Asn
num of homozygotes: 1
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

10-123843891-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843891
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843891
    reference: chr 10
allele count: 1
allele frequency: 8.337502084375522e-6
allele num: 119940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1876G>A
  hgvsp: ENSP00000334280.2:p.Asp626Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33826G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1876G>A
  hgvsp: ENSP00000395048.2:p.Asp626Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1876G>A
  hgvsp: ENSP00000424467.1:p.Asp626Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1876G>A
  hgvsp: ENSP00000427618.1:p.Asp626Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1876G>A
  hgvsp: ENSP00000358001.1:p.Asp626Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33826G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20011
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6418
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp626Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

10-123843895-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843895
    reference: chr 10
allele count: 2
allele frequency: 1.668279336692136e-5
allele num: 119884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1880A>G
  hgvsp: ENSP00000395048.2:p.His627Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1880A>G
  hgvsp: ENSP00000334280.2:p.His627Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1880A>G
  hgvsp: ENSP00000427618.1:p.His627Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1880A>G
  hgvsp: ENSP00000424467.1:p.His627Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1880A>G
  hgvsp: ENSP00000358001.1:p.His627Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33830A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33830A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13068
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24826
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4685
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His627Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

10-123843897-CCCAGCTCACACT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843897
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843885
    reference: chr 10
allele count: 1
allele frequency: 8.344737808338063e-6
allele num: 119836
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsp: ENSP00000358001.1:p.Ser629_Ser632del
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsp: ENSP00000395048.2:p.Ser629_Ser632del
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsp: ENSP00000334280.2:p.Ser629_Ser632del
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsp: ENSP00000427618.1:p.Ser629_Ser632del
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsp: ENSP00000424467.1:p.Ser629_Ser632del
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6417
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4680
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser629_Ser632del
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: CCCAGCTCACACT
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-123843902-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843902
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843902
    reference: chr 10
allele count: 1
allele frequency: 8.352404657300837e-6
allele num: 119726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1887C>T
  hgvsp: ENST00000515603.1:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1887C>T
  hgvsp: ENST00000334433.3:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33837C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1887C>T
  hgvsp: ENST00000515273.1:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1887C>T
  hgvsp: ENST00000369005.1:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1887C>T
  hgvsp: ENST00000453444.2:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33837C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6411
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4643
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser629Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-123843906-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843906
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843906
    reference: chr 10
allele count: 1
allele frequency: 8.358688020328329e-6
allele num: 119636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1891C>A
  hgvsp: ENSP00000334280.2:p.His631Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33841C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33841C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1891C>A
  hgvsp: ENSP00000395048.2:p.His631Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1891C>A
  hgvsp: ENSP00000358001.1:p.His631Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1891C>A
  hgvsp: ENSP00000424467.1:p.His631Asn
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1891C>A
  hgvsp: ENSP00000427618.1:p.His631Asn
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9297
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His631Asn
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/10-123843914-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843914
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843914
    reference: chr 10
allele count: 2
allele frequency: 1.674144512154289e-5
allele num: 119464
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33849A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1899A>C
  hgvsp: ENST00000453444.2:c.1899A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1899A>C
  hgvsp: ENST00000515273.1:c.1899A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1899A>C
  hgvsp: ENST00000369005.1:c.1899A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33849A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1899A>C
  hgvsp: ENST00000334433.3:c.1899A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1899A>C
  hgvsp: ENST00000515603.1:c.1899A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12726
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4596
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6404
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9145
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala633Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-123843922-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843922
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843922
    reference: chr 10
allele count: 46
allele frequency: 3.855243969895573e-4
allele num: 119318
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1907C>T
  hgvsp: ENSP00000358001.1:p.Pro636Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1907C>T
  hgvsp: ENSP00000424467.1:p.Pro636Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1907C>T
  hgvsp: ENSP00000427618.1:p.Pro636Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1907C>T
  hgvsp: ENSP00000395048.2:p.Pro636Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33857C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33857C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1907C>T
  hgvsp: ENSP00000334280.2:p.Pro636Leu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10646
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12584
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18631
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23324
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9042
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro636Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-123843928-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843928
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843928
    reference: chr 10
allele count: 2
allele frequency: 1.678302900107411e-5
allele num: 119168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1913A>T
  hgvsp: ENSP00000395048.2:p.Lys638Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1913A>T
  hgvsp: ENSP00000334280.2:p.Lys638Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1913A>T
  hgvsp: ENSP00000424467.1:p.Lys638Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1913A>T
  hgvsp: ENSP00000358001.1:p.Lys638Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33863A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1913A>T
  hgvsp: ENSP00000427618.1:p.Lys638Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33863A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3402
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8980
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys638Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

10-123843931-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843931
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843931
    reference: chr 10
allele count: 2
allele frequency: 1.678415575696542e-5
allele num: 119160
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1916G>A
  hgvsp: ENSP00000427618.1:p.Gly639Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1916G>A
  hgvsp: ENSP00000424467.1:p.Gly639Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1916G>A
  hgvsp: ENSP00000358001.1:p.Gly639Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33866G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1916G>A
  hgvsp: ENSP00000395048.2:p.Gly639Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1916G>A
  hgvsp: ENSP00000334280.2:p.Gly639Glu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33866G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8949
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly639Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

10-123843932-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843932
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843932
    reference: chr 10
allele count: 1
allele frequency: 8.393204861344255e-6
allele num: 119144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33867G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1917G>T
  hgvsp: ENST00000515603.1:c.1917G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1917G>T
  hgvsp: ENST00000453444.2:c.1917G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1917G>T
  hgvsp: ENST00000334433.3:c.1917G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1917G>T
  hgvsp: ENST00000515273.1:c.1917G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1917G>T
  hgvsp: ENST00000369005.1:c.1917G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33867G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12442
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6405
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8934
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly639Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

10-123843934-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843934
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843934
    reference: chr 10
allele count: 1
allele frequency: 8.391655337931961e-6
allele num: 119166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33869G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1919G>T
  hgvsp: ENSP00000424467.1:p.Gly640Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1919G>T
  hgvsp: ENSP00000358001.1:p.Gly640Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1919G>T
  hgvsp: ENSP00000395048.2:p.Gly640Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1919G>T
  hgvsp: ENSP00000427618.1:p.Gly640Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1919G>T
  hgvsp: ENSP00000334280.2:p.Gly640Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33869G>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly640Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-123843946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843946
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843946
    reference: chr 10
allele count: 1067
allele frequency: 8.967893763657758e-3
allele num: 118980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1931C>T
  hgvsp: ENSP00000427618.1:p.Thr644Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33881C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1931C>T
  hgvsp: ENSP00000358001.1:p.Thr644Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1931C>T
  hgvsp: ENSP00000395048.2:p.Thr644Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33881C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1931C>T
  hgvsp: ENSP00000424467.1:p.Thr644Met
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1931C>T
  hgvsp: ENSP00000334280.2:p.Thr644Met
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 1.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 10780
  bin: 2.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 1.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 5.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 3.25e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17574
  bin: 2.75e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 4.25e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6666
  bin: 3.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 4.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr644Met
num of homozygotes: 43
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

10-123843948-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843948
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843948
    reference: chr 10
allele count: 1
allele frequency: 8.406610958858046e-6
allele num: 118954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1933G>T
  hgvsp: ENSP00000395048.2:p.Asp645Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1933G>T
  hgvsp: ENSP00000334280.2:p.Asp645Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1933G>T
  hgvsp: ENSP00000424467.1:p.Asp645Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1933G>T
  hgvsp: ENSP00000427618.1:p.Asp645Tyr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33883G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33883G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1933G>T
  hgvsp: ENSP00000358001.1:p.Asp645Tyr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4494
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8815
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp645Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

10-123843951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843951
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843951
    reference: chr 10
allele count: 1
allele frequency: 8.408307407718826e-6
allele num: 118930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1936G>A
  hgvsp: ENSP00000395048.2:p.Gly646Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1936G>A
  hgvsp: ENSP00000424467.1:p.Gly646Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33886G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1936G>A
  hgvsp: ENSP00000427618.1:p.Gly646Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33886G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1936G>A
  hgvsp: ENSP00000334280.2:p.Gly646Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1936G>A
  hgvsp: ENSP00000358001.1:p.Gly646Arg
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4498
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly646Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

10-123843956-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843956
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843956
    reference: chr 10
allele count: 1
allele frequency: 8.406752303450132e-6
allele num: 118952
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1941C>T
  hgvsp: ENST00000369005.1:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1941C>T
  hgvsp: ENST00000515603.1:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1941C>T
  hgvsp: ENST00000453444.2:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33891C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1941C>T
  hgvsp: ENST00000334433.3:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33891C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1941C>T
  hgvsp: ENST00000515273.1:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6654
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro647Pro
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

10-123843961-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843961
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843961
    reference: chr 10
allele count: 1
allele frequency: 8.405056481979558e-6
allele num: 118976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33896C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1946C>T
  hgvsp: ENSP00000424467.1:p.Ser649Phe
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1946C>T
  hgvsp: ENSP00000358001.1:p.Ser649Phe
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1946C>T
  hgvsp: ENSP00000395048.2:p.Ser649Phe
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1946C>T
  hgvsp: ENSP00000334280.2:p.Ser649Phe
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33896C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1946C>T
  hgvsp: ENSP00000427618.1:p.Ser649Phe
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6434
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4582
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser649Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-123843968-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843968
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843968
    reference: chr 10
allele count: 1
allele frequency: 8.403361344537815e-6
allele num: 119000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33903A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1953A>T
  hgvsp: ENST00000515273.1:c.1953A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1953A>T
  hgvsp: ENST00000515603.1:c.1953A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1953A>T
  hgvsp: ENST00000453444.2:c.1953A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1953A>T
  hgvsp: ENST00000334433.3:c.1953A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1953A>T
  hgvsp: ENST00000369005.1:c.1953A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33903A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8793
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr651Thr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-123843974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843974
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843974
    reference: chr 10
allele count: 1
allele frequency: 8.400678774845007e-6
allele num: 119038
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1959G>A
  hgvsp: ENST00000369005.1:c.1959G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1959G>A
  hgvsp: ENST00000334433.3:c.1959G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1959G>A
  hgvsp: ENST00000515273.1:c.1959G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33909G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1959G>A
  hgvsp: ENST00000453444.2:c.1959G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1959G>A
  hgvsp: ENST00000515603.1:c.1959G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33909G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6658
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22876
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu653Glu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

10-123843992-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843992
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843992
    reference: chr 10
allele count: 135
allele frequency: 1.133006579830804e-3
allele num: 119152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1977A>G
  hgvsp: ENST00000515603.1:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1977A>G
  hgvsp: ENST00000453444.2:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33927A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1977A>G
  hgvsp: ENST00000334433.3:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1977A>G
  hgvsp: ENST00000369005.1:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1977A>G
  hgvsp: ENST00000515273.1:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33927A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17239
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11897
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 12277
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8726
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Leu659Leu
num of homozygotes: 2
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-123843997-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123843997
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123843997
    reference: chr 10
allele count: 1
allele frequency: 8.391092016715055e-6
allele num: 119174
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33932A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1982A>C
  hgvsp: ENSP00000424467.1:p.His661Pro
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1982A>C
  hgvsp: ENSP00000395048.2:p.His661Pro
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1982A>C
  hgvsp: ENSP00000427618.1:p.His661Pro
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1982A>C
  hgvsp: ENSP00000358001.1:p.His661Pro
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33932A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1982A>C
  hgvsp: ENSP00000334280.2:p.His661Pro
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His661Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

10-123844004-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844004
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844004
    reference: chr 10
allele count: 2
allele frequency: 1.67740203972088e-5
allele num: 119232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1989G>A
  hgvsp: ENST00000453444.2:c.1989G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33939G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1989G>A
  hgvsp: ENST00000334433.3:c.1989G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1989G>A
  hgvsp: ENST00000515273.1:c.1989G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1989G>A
  hgvsp: ENST00000515603.1:c.1989G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1989G>A
  hgvsp: ENST00000369005.1:c.1989G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33939G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12382
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6468
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu663Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

10-123844006-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844006
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844006
    reference: chr 10
allele count: 1
allele frequency: 8.381667616588997e-6
allele num: 119308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1991G>A
  hgvsp: ENSP00000424467.1:p.Gly664Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1991G>A
  hgvsp: ENSP00000358001.1:p.Gly664Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1991G>A
  hgvsp: ENSP00000427618.1:p.Gly664Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33941G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1991G>A
  hgvsp: ENSP00000395048.2:p.Gly664Asp
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33941G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1991G>A
  hgvsp: ENSP00000334280.2:p.Gly664Asp
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8814
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4644
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4773
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly664Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

10-123844011-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844011
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844011
    reference: chr 10
allele count: 1
allele frequency: 8.379560575843403e-6
allele num: 119338
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.1996G>T
  hgvsp: ENSP00000358001.1:p.Glu666Ter
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33946G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.1996G>T
  hgvsp: ENSP00000334280.2:p.Glu666Ter
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33946G>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.1996G>T
  hgvsp: ENSP00000427618.1:p.Glu666Ter
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.1996G>T
  hgvsp: ENSP00000395048.2:p.Glu666Ter
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.1996G>T
  hgvsp: ENSP00000424467.1:p.Glu666Ter
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6469
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8830
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu666Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

10-123844019-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844019
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844019
    reference: chr 10
allele count: 4
allele frequency: 3.352386060778759e-5
allele num: 119318
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2004C>T
  hgvsp: ENST00000369005.1:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33954C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2004C>T
  hgvsp: ENST00000334433.3:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2004C>T
  hgvsp: ENST00000515603.1:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33954C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2004C>T
  hgvsp: ENST00000515273.1:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2004C>T
  hgvsp: ENST00000453444.2:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17290
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro668Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

10-123844023-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844023
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844023
    reference: chr 10
allele count: 25
allele frequency: 2.092890868298564e-4
allele num: 119452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2008C>G
  hgvsp: ENSP00000334280.2:p.Leu670Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33958C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2008C>G
  hgvsp: ENSP00000395048.2:p.Leu670Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2008C>G
  hgvsp: ENSP00000427618.1:p.Leu670Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2008C>G
  hgvsp: ENSP00000358001.1:p.Leu670Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2008C>G
  hgvsp: ENSP00000424467.1:p.Leu670Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33958C>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11854
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6763
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17297
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12454
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu670Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

10-123844027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844027
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844027
    reference: chr 10
allele count: 2
allele frequency: 1.673976363453748e-5
allele num: 119476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33962C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2012C>T
  hgvsp: ENSP00000424467.1:p.Pro671Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2012C>T
  hgvsp: ENSP00000395048.2:p.Pro671Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33962C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2012C>T
  hgvsp: ENSP00000358001.1:p.Pro671Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2012C>T
  hgvsp: ENSP00000334280.2:p.Pro671Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2012C>T
  hgvsp: ENSP00000427618.1:p.Pro671Leu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12543
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22443
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro671Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

10-123844028-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844028
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844028
    reference: chr 10
allele count: 3
allele frequency: 2.509998159334683e-5
allele num: 119522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33963C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2013C>T
  hgvsp: ENST00000453444.2:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33963C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2013C>T
  hgvsp: ENST00000515273.1:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2013C>T
  hgvsp: ENST00000334433.3:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2013C>T
  hgvsp: ENST00000369005.1:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2013C>T
  hgvsp: ENST00000515603.1:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12551
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro671Pro
num of homozygotes: 1
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/10-123844029-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844029
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844029
    reference: chr 10
allele count: 2
allele frequency: 1.672828250723498e-5
allele num: 119558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2014C>A
  hgvsp: ENSP00000424467.1:p.Pro672Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2014C>A
  hgvsp: ENSP00000334280.2:p.Pro672Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2014C>A
  hgvsp: ENSP00000395048.2:p.Pro672Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2014C>A
  hgvsp: ENSP00000427618.1:p.Pro672Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33964C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2014C>A
  hgvsp: ENSP00000358001.1:p.Pro672Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33964C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17251
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3681
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro672Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

10-123844029-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844029
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844029
    reference: chr 10
allele count: 1
allele frequency: 8.364141253617491e-6
allele num: 119558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2014C>T
  hgvsp: ENSP00000334280.2:p.Pro672Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2014C>T
  hgvsp: ENSP00000427618.1:p.Pro672Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2014C>T
  hgvsp: ENSP00000395048.2:p.Pro672Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33964C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33964C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2014C>T
  hgvsp: ENSP00000424467.1:p.Pro672Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2014C>T
  hgvsp: ENSP00000358001.1:p.Pro672Ser
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4951
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8964
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro672Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-123844030-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844030
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844030
    reference: chr 10
allele count: 1
allele frequency: 8.365960579593749e-6
allele num: 119532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33965C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2015C>A
  hgvsp: ENSP00000424467.1:p.Pro672His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2015C>A
  hgvsp: ENSP00000358001.1:p.Pro672His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2015C>A
  hgvsp: ENSP00000334280.2:p.Pro672His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2015C>A
  hgvsp: ENSP00000427618.1:p.Pro672His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2015C>A
  hgvsp: ENSP00000395048.2:p.Pro672His
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33965C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17248
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12201
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22605
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6511
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro672His
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

10-123844032-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844032
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844032
    reference: chr 10
allele count: 1
allele frequency: 8.365120792344242e-6
allele num: 119544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33967G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2017G>C
  hgvsp: ENSP00000395048.2:p.Val673Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33967G>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2017G>C
  hgvsp: ENSP00000424467.1:p.Val673Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2017G>C
  hgvsp: ENSP00000334280.2:p.Val673Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2017G>C
  hgvsp: ENSP00000358001.1:p.Val673Leu
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2017G>C
  hgvsp: ENSP00000427618.1:p.Val673Leu
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17252
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4994
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val673Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

10-123844035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844035
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844035
    reference: chr 10
allele count: 1
allele frequency: 8.362882183715796e-6
allele num: 119576
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2020C>T
  hgvsp: ENSP00000427618.1:p.Pro674Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2020C>T
  hgvsp: ENSP00000424467.1:p.Pro674Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2020C>T
  hgvsp: ENSP00000395048.2:p.Pro674Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2020C>T
  hgvsp: ENSP00000358001.1:p.Pro674Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2020C>T
  hgvsp: ENSP00000334280.2:p.Pro674Ser
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33970C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33970C>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4843
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro674Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

10-123844036-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844036
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844036
    reference: chr 10
allele count: 33
allele frequency: 2.758090398502274e-4
allele num: 119648
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2021C>G
  hgvsp: ENSP00000334280.2:p.Pro674Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33971C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33971C>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2021C>G
  hgvsp: ENSP00000427618.1:p.Pro674Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2021C>G
  hgvsp: ENSP00000424467.1:p.Pro674Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2021C>G
  hgvsp: ENSP00000395048.2:p.Pro674Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2021C>G
  hgvsp: ENSP00000358001.1:p.Pro674Arg
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12731
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17309
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22736
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro674Arg
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-123844044-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844044
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844044
    reference: chr 10
allele count: 8
allele frequency: 6.680472977486806e-5
allele num: 119752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33979G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33979G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2029G>A
  hgvsp: ENSP00000427618.1:p.Ala677Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2029G>A
  hgvsp: ENSP00000395048.2:p.Ala677Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2029G>A
  hgvsp: ENSP00000334280.2:p.Ala677Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2029G>A
  hgvsp: ENSP00000424467.1:p.Ala677Thr
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2029G>A
  hgvsp: ENSP00000358001.1:p.Ala677Thr
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6830
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17497
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala677Thr
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

10-123844046-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844046
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844046
    reference: chr 10
allele count: 2
allele frequency: 1.669644198821231e-5
allele num: 119786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2031T>C
  hgvsp: ENST00000334433.3:c.2031T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2031T>C
  hgvsp: ENST00000515273.1:c.2031T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33981T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2031T>C
  hgvsp: ENST00000369005.1:c.2031T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33981T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2031T>C
  hgvsp: ENST00000515603.1:c.2031T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2031T>C
  hgvsp: ENST00000453444.2:c.2031T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala677Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

10-123844055-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844055
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844055
    reference: chr 10
allele count: 1
allele frequency: 8.342092530490349e-6
allele num: 119874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33990C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2040C>T
  hgvsp: ENST00000515273.1:c.2040C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33990C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2040C>T
  hgvsp: ENST00000515603.1:c.2040C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2040C>T
  hgvsp: ENST00000334433.3:c.2040C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2040C>T
  hgvsp: ENST00000453444.2:c.2040C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2040C>T
  hgvsp: ENST00000369005.1:c.2040C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17740
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6573
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro680Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

10-123844064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844064
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844064
    reference: chr 10
allele count: 2
allele frequency: 1.666777785185679e-5
allele num: 119992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+33999C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2049C>T
  hgvsp: ENST00000453444.2:c.2049C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2049C>T
  hgvsp: ENST00000515273.1:c.2049C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2049C>T
  hgvsp: ENST00000515603.1:c.2049C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+33999C>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2049C>T
  hgvsp: ENST00000369005.1:c.2049C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2049C>T
  hgvsp: ENST00000334433.3:c.2049C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6929
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro683Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

10-123844065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844065
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844065
    reference: chr 10
allele count: 10
allele frequency: 8.330556481172943e-5
allele num: 120040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2050G>A
  hgvsp: ENSP00000395048.2:p.Glu684Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2050G>A
  hgvsp: ENSP00000424467.1:p.Glu684Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2050G>A
  hgvsp: ENSP00000427618.1:p.Glu684Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2050G>A
  hgvsp: ENSP00000358001.1:p.Glu684Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34000G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34000G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2050G>A
  hgvsp: ENSP00000334280.2:p.Glu684Lys
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12673
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9375
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu684Lys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS

10-123844074-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844074
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844074
    reference: chr 10
allele count: 1
allele frequency: 8.320575118152166e-6
allele num: 120184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2059A>G
  hgvsp: ENSP00000427618.1:p.Ile687Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34009A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2059A>G
  hgvsp: ENSP00000395048.2:p.Ile687Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2059A>G
  hgvsp: ENSP00000424467.1:p.Ile687Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34009A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2059A>G
  hgvsp: ENSP00000358001.1:p.Ile687Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2059A>G
  hgvsp: ENSP00000334280.2:p.Ile687Val
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3961
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile687Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

10-123844077-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844077
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844077
    reference: chr 10
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2062T>C
  hgvsp: ENSP00000395048.2:p.Trp688Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2062T>C
  hgvsp: ENSP00000427618.1:p.Trp688Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34012T>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2062T>C
  hgvsp: ENSP00000358001.1:p.Trp688Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2062T>C
  hgvsp: ENSP00000334280.2:p.Trp688Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2062T>C
  hgvsp: ENSP00000424467.1:p.Trp688Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34012T>C
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5403
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Trp688Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

10-123844081-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844081
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844081
    reference: chr 10
allele count: 1
allele frequency: 8.316146630297385e-6
allele num: 120248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2066A>T
  hgvsp: ENSP00000395048.2:p.Glu689Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2066A>T
  hgvsp: ENSP00000427618.1:p.Glu689Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2066A>T
  hgvsp: ENSP00000424467.1:p.Glu689Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2066A>T
  hgvsp: ENSP00000358001.1:p.Glu689Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34016A>T
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2066A>T
  hgvsp: ENSP00000334280.2:p.Glu689Val
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34016A>T
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13444
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6625
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu689Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

10-123844082-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844082
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844082
    reference: chr 10
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2067G>A
  hgvsp: ENST00000515603.1:c.2067G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2067G>A
  hgvsp: ENST00000515273.1:c.2067G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34017G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2067G>A
  hgvsp: ENST00000453444.2:c.2067G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2067G>A
  hgvsp: ENST00000334433.3:c.2067G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2067G>A
  hgvsp: ENST00000369005.1:c.2067G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34017G>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5424
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu689Glu
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-123844088-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844088
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844088
    reference: chr 10
allele count: 1
allele frequency: 8.31282835672009e-6
allele num: 120296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2073A>C
  hgvsp: ENST00000453444.2:c.2073A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2073A>C
  hgvsp: ENST00000515273.1:c.2073A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2073A>C
  hgvsp: ENST00000369005.1:c.2073A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34023A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34023A>C
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2073A>C
  hgvsp: ENST00000515603.1:c.2073A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2073A>C
  hgvsp: ENST00000334433.3:c.2073A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9591
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser691Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

10-123844094-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844094
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844094
    reference: chr 10
allele count: 1
allele frequency: 8.309788931361144e-6
allele num: 120340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34029G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2079G>A
  hgvsp: ENST00000369005.1:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2079G>A
  hgvsp: ENST00000515273.1:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34029G>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2079G>A
  hgvsp: ENST00000515603.1:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2079G>A
  hgvsp: ENST00000453444.2:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2079G>A
  hgvsp: ENST00000334433.3:c.2079G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7021
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23658
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu693Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/10-123844095-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844095
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844095
    reference: chr 10
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2080C>A
  hgvsp: ENSP00000427618.1:p.Gln694Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2080C>A
  hgvsp: ENSP00000334280.2:p.Gln694Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2080C>A
  hgvsp: ENSP00000424467.1:p.Gln694Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2080C>A
  hgvsp: ENSP00000395048.2:p.Gln694Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2080C>A
  hgvsp: ENSP00000358001.1:p.Gln694Lys
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34030C>A
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34030C>A
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18313
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5485
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln694Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

10-123844102-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 123844102
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 123844102
    reference: chr 10
allele count: 3
allele frequency: 2.491942718543377e-5
allele num: 120388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000395048
  ensembl transcript: ENST00000453444
  gene symbol: TACC2
  hgvsc: ENST00000453444.2:c.2087A>G
  hgvsp: ENSP00000395048.2:p.Lys696Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000424467
  ensembl transcript: ENST00000515273
  gene symbol: TACC2
  hgvsc: ENST00000515273.1:c.2087A>G
  hgvsp: ENSP00000424467.1:p.Lys696Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000358001
  ensembl transcript: ENST00000369005
  gene symbol: TACC2
  hgvsc: ENST00000369005.1:c.2087A>G
  hgvsp: ENSP00000358001.1:p.Lys696Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000334280
  ensembl transcript: ENST00000334433
  gene symbol: TACC2
  hgvsc: ENST00000334433.3:c.2087A>G
  hgvsp: ENSP00000334280.2:p.Lys696Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000350701
  ensembl transcript: ENST00000358010
  gene symbol: TACC2
  hgvsc: ENST00000358010.1:c.146+34037A>G
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000427618
  ensembl transcript: ENST00000515603
  gene symbol: TACC2
  hgvsc: ENST00000515603.1:c.2087A>G
  hgvsp: ENSP00000427618.1:p.Lys696Arg
  variant of: http://identifiers.org/hgnc/11523
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138162
  ensembl protein: ENSP00000425062
  ensembl transcript: ENST00000513429
  gene symbol: TACC2
  hgvsc: ENST00000513429.1:c.146+34037A>G
  variant of: http://identifiers.org/hgnc/11523
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13712
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Lys696Arg
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 26763
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4793
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

QD
type: SiteQuality
SIO_000300: 1.175e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

DP
type: SiteQuality
SIO_000300: 1.879969e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.354e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 4813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4793
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26707
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6482
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.96e0

FS
type: SiteQuality
SIO_000300: 2.116e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.879863e6

QD
type: SiteQuality
SIO_000300: 1.39e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26714
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4811
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

FS
type: SiteQuality
SIO_000300: 2.699e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.393e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.837e-1

DP
type: SiteQuality
SIO_000300: 1.879163e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.037e1

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6529
bin: 9.75e1
variant carriers: 80

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26739
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 77
allele frequency: 7.438176197836167e-3
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.212389380530973e-3
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

QD
type: SiteQuality
SIO_000300: 1.452e1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

DP
type: SiteQuality
SIO_000300: 1.881219e6

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26731
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4808
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

QD
type: SiteQuality
SIO_000300: 1.311e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 6.464e0

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.878312e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.747e0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26721
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6488
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9960
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.306083193075259e-4
allele num: 66544
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.123789764868603e-3
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.932367149758454e-4
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.879093e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.03e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.109e0

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4809
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1891
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

QD
type: SiteQuality
SIO_000300: 1.293e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 1.049e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

DP
type: SiteQuality
SIO_000300: 1.877792e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6458
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1891
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502855425308085e-5
allele num: 66540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.431e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.877924e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.26e-1

GenotypeQuality
all individuals: 6457
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1879
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006343384541382e-5
allele num: 66526
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.115e0

VQSLOD
type: SiteQuality
SIO_000300: -2.811e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.877537e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 3.25e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 2.595604775912787e-4
allele num: 11558
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.861e0

FS
type: SiteQuality
SIO_000300: 1.078e0

QD
type: SiteQuality
SIO_000300: 1.208e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.515e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.866e0

MQ
type: SiteQuality
SIO_000300: 5.803e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.391e0

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 7.72e0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

DP
type: SiteQuality
SIO_000300: 1.875689e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.528e0

DP
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SIO_000300: 1.87341e6

VQSLOD
type: SiteQuality
SIO_000300: -9.858e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 2.213e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 6.46e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1891
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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QD
type: SiteQuality
SIO_000300: 8.98e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.873365e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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allele num: 6608
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Latino
type: Population
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allele num: 11552
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Other
type: Population
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African
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.50652324565368e-5
allele num: 66378
num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQ
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FS
type: SiteQuality
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16496
num of homozygotes: 0

African
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allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.013500482160077e-5
allele num: 66368
num of homozygotes: 0

East Asian
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Latino
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Other
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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MQ
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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MQRankSum
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QD
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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allele frequency: 9.72762645914397e-5
allele num: 10280
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

DP
type: SiteQuality
SIO_000300: 1.871728e6

FS
type: SiteQuality
SIO_000300: 3.605e0

QD
type: SiteQuality
SIO_000300: 1.56e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6450
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1888
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.732801940738174e-4
allele num: 11542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.153e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.923e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.871284e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.198e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.07e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024071610015725e-5
allele num: 66136
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.3e1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.863041e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

FS
type: SiteQuality
SIO_000300: 1.085e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 6.186e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.854e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.213e1

DP
type: SiteQuality
SIO_000300: 1.861708e6

VQSLOD
type: SiteQuality
SIO_000300: 4.76e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.861092e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

FS
type: SiteQuality
SIO_000300: 1.77e0

MQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.22e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 4
allele frequency: 4.655493482309125e-4
allele num: 8592
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DP
type: SiteQuality
SIO_000300: 1.861092e6

QD
type: SiteQuality
SIO_000300: 1.298e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-2

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 8.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.958480219349785e-4
allele num: 10212
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.568e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

FS
type: SiteQuality
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QD
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.93e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66048
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Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

Latino
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allele frequency: 4.344803614876608e-4
allele num: 11508
num of homozygotes: 0

African
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allele count: 61
allele frequency: 5.976876347246717e-3
allele num: 10206
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6566
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11502
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65836
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South Asian
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allele num: 16444
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FS
type: SiteQuality
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BaseQRankSum
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DP
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MQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9508
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3436
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.973943939992104e-4
allele num: 10132
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

DP
type: SiteQuality
SIO_000300: 1.842442e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 1.0641e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

VQSLOD
type: SiteQuality
SIO_000300: -8.727e-1

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520357588104722e-5
allele num: 65774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.187e1

QD
type: SiteQuality
SIO_000300: 4.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.841912e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: -3.853e0

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521931026085898e-5
allele num: 65706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.371e0

FS
type: SiteQuality
SIO_000300: 4.301e0

QD
type: SiteQuality
SIO_000300: 1.228e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.18e-1

DP
type: SiteQuality
SIO_000300: 1.837049e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.548e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.27e-1

QD
type: SiteQuality
SIO_000300: 7.64e0

FS
type: SiteQuality
SIO_000300: 4.732e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

VQSLOD
type: SiteQuality
SIO_000300: -1.215e0

DP
type: SiteQuality
SIO_000300: 1.831637e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.63e-1

GenotypeQuality
all individuals: 557
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1855
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variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.986491855383393e-4
allele num: 10068
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4464e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.822084e6

VQSLOD
type: SiteQuality
SIO_000300: -1.731e0

QD
type: SiteQuality
SIO_000300: 1.284e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4537
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GenotypeQuality
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GenotypeQuality
all individuals: 6436
bin: 9.75e1
variant carriers: 46

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.981071926678622e-4
allele num: 10038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 6.263366941643752e-4
allele num: 65460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 5.38e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

DP
type: SiteQuality
SIO_000300: 1.816405e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4525
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.071253071253071e-4
allele num: 6512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10012
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.24e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.399e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.811537e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 373
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.058852318610058e-5
allele num: 65384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529894131326112e-5
allele num: 65364
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.189e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.808453e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.536098310291859e-4
allele num: 6510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.368e1

MQ
type: SiteQuality
SIO_000300: 5.912e1

MQRankSum
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.445e0

VQSLOD
type: SiteQuality
SIO_000300: -3.055e0

DP
type: SiteQuality
SIO_000300: 1.806865e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.19e-1

GenotypeQuality
all individuals: 21244
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1824
bin: 9.25e1
variant carriers: 7

GenotypeQuality
all individuals: 498
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8628
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7230
bin: 9.75e1
variant carriers: 998

GenotypeQuality
all individuals: 995
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3346
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 4410
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 548
bin: 5.75e1
variant carriers: 3

Latino
type: Population
allele count: 60
allele frequency: 5.248425472358292e-3
allele num: 11432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

African
type: Population
allele count: 985
allele frequency: 9.857886309047238e-2
allele num: 9992
num of homozygotes: 43

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.216911764705882e-4
allele num: 65280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.99e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.41e1

FS
type: SiteQuality
SIO_000300: 5.31e-1

DP
type: SiteQuality
SIO_000300: 1.807055e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 4543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1866
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 22237
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532238293699436e-5
allele num: 65264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

DP
type: SiteQuality
SIO_000300: 1.798462e6

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.069e0

GenotypeQuality
all individuals: 6425
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4555
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8779
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variant carriers: 0

GenotypeQuality
all individuals: 875
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variant carriers: 0

GenotypeQuality
all individuals: 985
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variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 3411
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variant carriers: 0

GenotypeQuality
all individuals: 591
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GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 22558
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variant carriers: 0

GenotypeQuality
all individuals: 1866
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65260
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.289e1

DP
type: SiteQuality
SIO_000300: 1.798565e6

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.17e-2

FS
type: SiteQuality
SIO_000300: 7.695e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 554
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1863
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variant carriers: 0

GenotypeQuality
all individuals: 4523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
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variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6433
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22683
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531721961829489e-5
allele num: 65286
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.983e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.395e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.797722e6

GenotypeQuality
all individuals: 512
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
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variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
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variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531065315246348e-5
allele num: 65314
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: -2.97e0

DP
type: SiteQuality
SIO_000300: 1.797982e6

FS
type: SiteQuality
SIO_000300: 1.478e0

QD
type: SiteQuality
SIO_000300: 3.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 685
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2041
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 4574
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GenotypeQuality
all individuals: 903
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variant carriers: 0

GenotypeQuality
all individuals: 1868
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variant carriers: 0

GenotypeQuality
all individuals: 383
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GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
all individuals: 520
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GenotypeQuality
all individuals: 6437
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530596626565035e-5
allele num: 65334
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.86e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 3.393e0

MQRankSum
type: SiteQuality
SIO_000300: -5.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

DP
type: SiteQuality
SIO_000300: 1.79784e6

VQSLOD
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
all individuals: 3459
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
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GenotypeQuality
all individuals: 864
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variant carriers: 0

GenotypeQuality
all individuals: 1868
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variant carriers: 0

GenotypeQuality
all individuals: 501
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variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
all individuals: 1879
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GenotypeQuality
all individuals: 484
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529800514012973e-5
allele num: 65368
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.799473e6

MQRankSum
type: SiteQuality
SIO_000300: -1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.655e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.04e-1

GenotypeQuality
all individuals: 358
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
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GenotypeQuality
all individuals: 22584
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 556
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GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 1889
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variant carriers: 0

GenotypeQuality
all individuals: 4601
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GenotypeQuality
all individuals: 6565
bin: 9.75e1
variant carriers: 131

GenotypeQuality
all individuals: 845
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1880
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

African
type: Population
allele count: 122
allele frequency: 1.216593538093339e-2
allele num: 10028
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.638485746585597e-5
allele num: 65458
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.001575354454753e-4
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

DP
type: SiteQuality
SIO_000300: 1.802274e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.365e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1886
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variant carriers: 0

GenotypeQuality
all individuals: 8758
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 22305
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65472
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.103515625e-5
allele num: 16384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.225e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

DP
type: SiteQuality
SIO_000300: 1.802271e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

FS
type: SiteQuality
SIO_000300: 4.142e0

GenotypeQuality
all individuals: 871
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1863
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22217
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1902
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.053435114503817e-5
allele num: 65500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.80405e6

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.838e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 5.142e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

GenotypeQuality
all individuals: 496
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1848
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3545
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1896
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6467
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 553
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22590
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525413387027885e-5
allele num: 65556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.319e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.167e0

QD
type: SiteQuality
SIO_000300: 1.17e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 1.804797e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.805e0

GenotypeQuality
all individuals: 4794
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4671
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1903
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525273786644703e-5
allele num: 65562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 1.80591e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

FS
type: SiteQuality
SIO_000300: 3.532e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.641e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.856e0

QD
type: SiteQuality
SIO_000300: 5.48e0

GenotypeQuality
all individuals: 1921
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6480
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21533
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.958175662218681e-5
allele num: 10042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.050361467833938e-5
allele num: 65566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.361e0

DP
type: SiteQuality
SIO_000300: 1.808223e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.22e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 9.43e0

GenotypeQuality
all individuals: 4869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1684
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1927
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3608
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 22080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1929
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6505
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 828
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.305210918114144e-4
allele num: 6448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.894929302779132e-4
allele num: 65632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.151e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

DP
type: SiteQuality
SIO_000300: 1.810214e6

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.781e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-2

GenotypeQuality
all individuals: 8915
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6501
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4907
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1939
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65644
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.099048548426445e-5
allele num: 16396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

QD
type: SiteQuality
SIO_000300: 8.4e0

DP
type: SiteQuality
SIO_000300: 1.813397e6

VQSLOD
type: SiteQuality
SIO_000300: 3.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

GenotypeQuality
all individuals: 8961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4927
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4775
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1945
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6510
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.219066195294405e-4
allele num: 16406
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522626225714112e-5
allele num: 65676
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

VQSLOD
type: SiteQuality
SIO_000300: -2.713e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

FS
type: SiteQuality
SIO_000300: 4.536e0

DP
type: SiteQuality
SIO_000300: 1.814242e6

QD
type: SiteQuality
SIO_000300: 3.063e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.137e0

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

GenotypeQuality
all individuals: 1604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 22575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4951
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6511
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4806
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8964
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.044696139325295e-5
allele num: 65688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.815197e6

FS
type: SiteQuality
SIO_000300: 1.1892e1

VQSLOD
type: SiteQuality
SIO_000300: -5.624e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.148e0

QD
type: SiteQuality
SIO_000300: 1.044e1

GenotypeQuality
all individuals: 694
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6511
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3681
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4806
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522348069662648e-5
allele num: 65688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 1.1892e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

DP
type: SiteQuality
SIO_000300: 1.815197e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.624e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.148e0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4807
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1598
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8999
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522765341860819e-5
allele num: 65670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.102e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

FS
type: SiteQuality
SIO_000300: 1.441e0

DP
type: SiteQuality
SIO_000300: 1.815941e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 3695
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4840
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6518
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522487134983709e-5
allele num: 65682
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

DP
type: SiteQuality
SIO_000300: 1.816844e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.68e-1

FS
type: SiteQuality
SIO_000300: 4.246e0

QD
type: SiteQuality
SIO_000300: 1.537e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

GenotypeQuality
all individuals: 631
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 472
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variant carriers: 0

GenotypeQuality
all individuals: 6522
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.819936e6

QD
type: SiteQuality
SIO_000300: 1.188e1

MQRankSum
type: SiteQuality
SIO_000300: -6.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.633e0

VQSLOD
type: SiteQuality
SIO_000300: -2.81e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
all individuals: 1504
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4861
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1955
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6562
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 576
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.642525533890436e-4
allele num: 6462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.358437935843794e-4
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.093102607847916e-4
allele num: 16412
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.281577026040399e-4
allele num: 65744
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.129e0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.633e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 1.82135e6

QD
type: SiteQuality
SIO_000300: 1.32e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

GenotypeQuality
all individuals: 1965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6556
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 23086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9156
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65816
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.319664492078285e-4
allele num: 8584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

QD
type: SiteQuality
SIO_000300: 1.08e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.281e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

DP
type: SiteQuality
SIO_000300: 1.827527e6

GenotypeQuality
all individuals: 301
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1985
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5151
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 6557
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9170
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variant carriers: 0

GenotypeQuality
all individuals: 4944
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variant carriers: 0

GenotypeQuality
all individuals: 3804
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 318
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variant carriers: 0

GenotypeQuality
all individuals: 23254
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.217878455730118e-4
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.021e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

FS
type: SiteQuality
SIO_000300: 6.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.950000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

DP
type: SiteQuality
SIO_000300: 1.829319e6

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeQuality
all individuals: 356
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5253
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5000
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1991
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variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.836649e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-2

QD
type: SiteQuality
SIO_000300: 4.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

FS
type: SiteQuality
SIO_000300: 2.1065e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.215e0

GenotypeQuality
all individuals: 9339
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
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variant carriers: 0

GenotypeQuality
all individuals: 175
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3907
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034164694459615e-5
allele num: 65916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.291e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

DP
type: SiteQuality
SIO_000300: 1.84329e6

FS
type: SiteQuality
SIO_000300: 6.515e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-1

QD
type: SiteQuality
SIO_000300: 2.15e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: -2.592e0

GenotypeQuality
all individuals: 286
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3916
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variant carriers: 0

GenotypeQuality
all individuals: 380
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 23508
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 149
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variant carriers: 0

GenotypeQuality
all individuals: 153
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GenotypeQuality
all individuals: 6605
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variant carriers: 10

GenotypeQuality
all individuals: 245
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variant carriers: 0

GenotypeQuality
all individuals: 5030
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.032876379958753e-5
allele num: 65944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.25531914893617e-4
allele num: 16450
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.22e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

DP
type: SiteQuality
SIO_000300: 1.845149e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
all individuals: 2038
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GenotypeQuality
all individuals: 117
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variant carriers: 0

GenotypeQuality
all individuals: 189
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GenotypeQuality
all individuals: 2040
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variant carriers: 0

GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
all individuals: 6611
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23644
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66008
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

MQRankSum
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SIO_000300: 1.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
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SIO_000300: -1.409e-1

DP
type: SiteQuality
SIO_000300: 1.850725e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8612
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6554
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.514325519413653e-5
allele num: 66036
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.619e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.77e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.314e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.852041e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8610
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele num: 894
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

FS
type: SiteQuality
SIO_000300: 4.155e0

DP
type: SiteQuality
SIO_000300: 1.854163e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.002e-1

QD
type: SiteQuality
SIO_000300: 7.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.21e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 894
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16466
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.83477576711251e-5
allele num: 10168
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.66e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.854864e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.51e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 1.289e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
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allele frequency: 8.698677800974252e-5
allele num: 11496
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66068
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10180
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6570
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South Asian
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allele count: 0
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MQ
type: SiteQuality
SIO_000300: 5.843e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.488e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e0

VQSLOD
type: SiteQuality
SIO_000300: -2.387e0

DP
type: SiteQuality
SIO_000300: 1.858445e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8618
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.512950859356088e-5
allele num: 66096
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African
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Other
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allele count: 0
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VQSLOD
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.904e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.860629e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
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African
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allele frequency: 9.828975820719482e-5
allele num: 10174
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
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