15-88680808-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680808
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680808
    reference: chr 15
allele count: 1
allele frequency: 9.118263882556761e-6
allele num: 109670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-16C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13675
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16325
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4023
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

15-88680810-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680810
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680810
    reference: chr 15
allele count: 1
allele frequency: 9.131586156515387e-6
allele num: 109510
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-18C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-18C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5030
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

15-88680818-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680818
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680818
    reference: chr 15
allele count: 1
allele frequency: 9.397966280096986e-6
allele num: 106406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-26C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21217
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10903
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-88680821-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680821
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680821
    reference: chr 15
allele count: 2
allele frequency: 1.880335451844609e-5
allele num: 106364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-29G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21218
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12278
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

15-88680823-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680823
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680823
    reference: chr 15
allele count: 1
allele frequency: 9.45411915971789e-6
allele num: 105774
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-31A>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

15-88680826-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680826
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680826
    reference: chr 15
allele count: 1
allele frequency: 9.545445867776484e-6
allele num: 104762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-34C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5504
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

15-88680830-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680830
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680830
    reference: chr 15
allele count: 2
allele frequency: 1.949963925667375e-5
allele num: 102566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-38G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21020
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13747
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

15-88680831-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680831
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680831
    reference: chr 15
allele count: 15
allele frequency: 1.466419004790302e-4
allele num: 102290
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-39C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-39C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21110
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13625
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

15-88680836-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680836
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680836
    reference: chr 15
allele count: 1
allele frequency: 9.932853907584728e-6
allele num: 100676
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-44A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-44A>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20361
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1496
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5856
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

15-88680840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680840
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680840
    reference: chr 15
allele count: 1
allele frequency: 1.022766788716837e-5
allele num: 97774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-48G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14080
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19663
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

15-88680841-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88680841
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88680841
    reference: chr 15
allele count: 6
allele frequency: 6.132210457462901e-5
allele num: 97844
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.171-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.465-49G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.171-49G>C
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14043
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19691
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6802
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-88690517-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690517
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690517
    reference: chr 15
allele count: 1
allele frequency: 8.450370971285639e-6
allele num: 118338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+49G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+49G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15094
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

15-88690517-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690517
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690517
    reference: chr 15
allele count: 1
allele frequency: 8.450370971285639e-6
allele num: 118338
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+49G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13628
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/15-88690518-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690518
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690518
    reference: chr 15
allele count: 1
allele frequency: 8.456516591685553e-6
allele num: 118252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+48G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9599
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7570
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3910
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/15-88690519-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690519
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690519
    reference: chr 15
allele count: 1
allele frequency: 8.453514125822104e-6
allele num: 118294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+47G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16037
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3042
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

15-88690519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690519
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690519
    reference: chr 15
allele count: 2
allele frequency: 1.690702825164421e-5
allele num: 118294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+47G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16037
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2808
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

15-88690524-C-CCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690524
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690527
    reference: chr 15
allele count: 1
allele frequency: 8.439530762089629e-6
allele num: 118490
alternate allele: CCAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+39_170+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+39_170+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+39_464+41dupCTG
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18819
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

15-88690528-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690528
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690528
    reference: chr 15
allele count: 1
allele frequency: 8.429428821903027e-6
allele num: 118632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+38G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19860
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7567
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

15-88690535-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690535
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690535
    reference: chr 15
allele count: 1
allele frequency: 8.416233230655287e-6
allele num: 118818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+31C>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-88690542-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690542
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690542
    reference: chr 15
allele count: 1
allele frequency: 8.39278220730172e-6
allele num: 119150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+24C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23719
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

15-88690546-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690546
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690546
    reference: chr 15
allele count: 1
allele frequency: 8.378998877214151e-6
allele num: 119346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+20C>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

15-88690550-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690550
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690550
    reference: chr 15
allele count: 7
allele frequency: 5.856172405715624e-5
allele num: 119532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+16A>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5797
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

15-88690563-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690563
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690563
    reference: chr 15
allele count: 1
allele frequency: 8.33541718763024e-6
allele num: 119970
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+3A>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: c.464+3A>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/15-88690565-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690565
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690565
    reference: chr 15
allele count: 1
allele frequency: 8.331666999933347e-6
allele num: 120024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.170+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.170+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.464+1G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
hgvs: c.464+1G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

15-88690567-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690567
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690567
    reference: chr 15
allele count: 1
allele frequency: 8.326949338840222e-6
allele num: 120092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.463T>C
  hgvsp: ENST00000540489.2:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.463T>C
  hgvsp: ENST00000394480.2:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.463T>C
  hgvsp: ENST00000355254.2:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.463T>C
  hgvsp: ENST00000360948.2:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.463T>C
  hgvsp: ENST00000558676.1:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.169T>C
  hgvsp: ENST00000542733.2:c.169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.169T>C
  hgvsp: ENST00000559188.1:c.169T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.463T>C
  hgvsp: ENST00000357724.2:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.463T>C
  hgvsp: ENST00000317501.3:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.463T>C
  hgvsp: ENST00000557856.1:c.463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.463T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

15-88690568-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690568
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690568
    reference: chr 15
allele count: 4
allele frequency: 3.329947886315579e-5
allele num: 120122
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.462A>G
  hgvsp: ENST00000360948.2:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.462A>G
  hgvsp: ENST00000558676.1:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.462A>G
  hgvsp: ENST00000540489.2:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.462A>G
  hgvsp: ENST00000557856.1:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.168A>G
  hgvsp: ENST00000559188.1:c.168A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.462A>G
  hgvsp: ENST00000394480.2:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.462A>G
  hgvsp: ENST00000355254.2:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.168A>G
  hgvsp: ENST00000542733.2:c.168A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.462A>G
  hgvsp: ENST00000317501.3:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.462A>G
  hgvsp: ENST00000357724.2:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.462A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

15-88690571-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690571
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690571
    reference: chr 15
allele count: 2
allele frequency: 1.664225802156837e-5
allele num: 120176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.165G>A
  hgvsp: ENST00000542733.2:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.165G>A
  hgvsp: ENST00000559188.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.459G>A
  hgvsp: ENST00000557856.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.459G>A
  hgvsp: ENST00000360948.2:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.459G>A
  hgvsp: ENST00000558676.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.459G>A
  hgvsp: ENST00000540489.2:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.459G>A
  hgvsp: ENST00000355254.2:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.459G>A
  hgvsp: ENST00000317501.3:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.459G>A
  hgvsp: ENST00000394480.2:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.459G>A
  hgvsp: ENST00000357724.2:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg153Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

15-88690572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690572
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690572
    reference: chr 15
allele count: 3
allele frequency: 2.496089459846241e-5
allele num: 120188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.164G>A
  hgvsp: ENSP00000437773.2:p.Arg55Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.164G>A
  hgvsp: ENSP00000473656.1:p.Arg55Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.458G>A
  hgvsp: ENSP00000377990.1:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.458G>A
  hgvsp: ENSP00000444673.2:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.458G>A
  hgvsp: ENSP00000347397.2:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.458G>A
  hgvsp: ENSP00000453511.1:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.458G>A
  hgvsp: ENSP00000318328.3:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.458G>A
  hgvsp: ENSP00000354207.2:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.458G>A
  hgvsp: ENSP00000453959.1:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.458G>A
  hgvsp: ENSP00000350356.2:p.Arg153Gln
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg153Gln
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

15-88690573-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690573
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690573
    reference: chr 15
allele count: 3
allele frequency: 2.494512073438436e-5
allele num: 120264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.163C>T
  hgvsp: ENSP00000437773.2:p.Arg55Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.163C>T
  hgvsp: ENSP00000473656.1:p.Arg55Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.457C>T
  hgvsp: ENSP00000377990.1:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.457C>T
  hgvsp: ENSP00000453959.1:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.457C>T
  hgvsp: ENSP00000453511.1:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.457C>T
  hgvsp: ENSP00000350356.2:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.457C>T
  hgvsp: ENSP00000354207.2:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.457C>T
  hgvsp: ENSP00000444673.2:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.457C>T
  hgvsp: ENSP00000318328.3:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.457C>T
  hgvsp: ENSP00000347397.2:p.Arg153Trp
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg153Trp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

15-88690579-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690579
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690579
    reference: chr 15
allele count: 1
allele frequency: 8.307855908547122e-6
allele num: 120368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.451A>C
  hgvsp: ENSP00000377990.1:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.451A>C
  hgvsp: ENSP00000354207.2:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.157A>C
  hgvsp: ENSP00000473656.1:p.Ser53Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.157A>C
  hgvsp: ENSP00000437773.2:p.Ser53Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.451A>C
  hgvsp: ENSP00000453959.1:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.451A>C
  hgvsp: ENSP00000453511.1:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.451A>C
  hgvsp: ENSP00000444673.2:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.451A>C
  hgvsp: ENSP00000347397.2:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.451A>C
  hgvsp: ENSP00000350356.2:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.451A>C
  hgvsp: ENSP00000318328.3:p.Ser151Arg
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5921
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser151Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

15-88690580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690580
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690580
    reference: chr 15
allele count: 2
allele frequency: 1.661515967168445e-5
allele num: 120372
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.450G>A
  hgvsp: ENST00000360948.2:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.156G>A
  hgvsp: ENST00000542733.2:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.450G>A
  hgvsp: ENST00000558676.1:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.450G>A
  hgvsp: ENST00000317501.3:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.450G>A
  hgvsp: ENST00000540489.2:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.156G>A
  hgvsp: ENST00000559188.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.450G>A
  hgvsp: ENST00000557856.1:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.450G>A
  hgvsp: ENST00000355254.2:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.450G>A
  hgvsp: ENST00000394480.2:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.450G>A
  hgvsp: ENST00000357724.2:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu150Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/15-88690583-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690583
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690583
    reference: chr 15
allele count: 2
allele frequency: 1.661129568106312e-5
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.447G>T
  hgvsp: ENST00000558676.1:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.447G>T
  hgvsp: ENST00000357724.2:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.153G>T
  hgvsp: ENST00000542733.2:c.153G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.447G>T
  hgvsp: ENST00000355254.2:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.153G>T
  hgvsp: ENST00000559188.1:c.153G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.447G>T
  hgvsp: ENST00000360948.2:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.447G>T
  hgvsp: ENST00000557856.1:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.447G>T
  hgvsp: ENST00000394480.2:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.447G>T
  hgvsp: ENST00000540489.2:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.447G>T
  hgvsp: ENST00000317501.3:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr149Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

15-88690583-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690583
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690583
    reference: chr 15
allele count: 2
allele frequency: 1.661129568106312e-5
allele num: 120400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.447G>A
  hgvsp: ENST00000317501.3:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.447G>A
  hgvsp: ENST00000558676.1:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.447G>A
  hgvsp: ENST00000557856.1:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.447G>A
  hgvsp: ENST00000360948.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.153G>A
  hgvsp: ENST00000559188.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.153G>A
  hgvsp: ENST00000542733.2:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.447G>A
  hgvsp: ENST00000357724.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.447G>A
  hgvsp: ENST00000540489.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.447G>A
  hgvsp: ENST00000355254.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.447G>A
  hgvsp: ENST00000394480.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr149Thr
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

15-88690584-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690584
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690584
    reference: chr 15
allele count: 11
allele frequency: 9.135757354284671e-5
allele num: 120406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.446C>T
  hgvsp: ENSP00000318328.3:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.446C>T
  hgvsp: ENSP00000354207.2:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.446C>T
  hgvsp: ENSP00000377990.1:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.446C>T
  hgvsp: ENSP00000444673.2:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.446C>T
  hgvsp: ENSP00000350356.2:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.446C>T
  hgvsp: ENSP00000453959.1:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.446C>T
  hgvsp: ENSP00000453511.1:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.152C>T
  hgvsp: ENSP00000473656.1:p.Thr51Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.152C>T
  hgvsp: ENSP00000437773.2:p.Thr51Met
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.446C>T
  hgvsp: ENSP00000347397.2:p.Thr149Met
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr149Met
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

15-88690584-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690584
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690584
    reference: chr 15
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.152C>G
  hgvsp: ENSP00000437773.2:p.Thr51Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.446C>G
  hgvsp: ENSP00000444673.2:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.152C>G
  hgvsp: ENSP00000473656.1:p.Thr51Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.446C>G
  hgvsp: ENSP00000453511.1:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.446C>G
  hgvsp: ENSP00000377990.1:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.446C>G
  hgvsp: ENSP00000354207.2:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.446C>G
  hgvsp: ENSP00000453959.1:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.446C>G
  hgvsp: ENSP00000318328.3:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.446C>G
  hgvsp: ENSP00000350356.2:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.446C>G
  hgvsp: ENSP00000347397.2:p.Thr149Arg
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr149Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

15-88690592-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690592
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690592
    reference: chr 15
allele count: 2
allele frequency: 1.659668398254029e-5
allele num: 120506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.438C>T
  hgvsp: ENST00000394480.2:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.144C>T
  hgvsp: ENST00000542733.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.438C>T
  hgvsp: ENST00000317501.3:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.438C>T
  hgvsp: ENST00000360948.2:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.438C>T
  hgvsp: ENST00000355254.2:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.144C>T
  hgvsp: ENST00000559188.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.438C>T
  hgvsp: ENST00000558676.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.438C>T
  hgvsp: ENST00000557856.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.438C>T
  hgvsp: ENST00000540489.2:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.438C>T
  hgvsp: ENST00000357724.2:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu146Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-88690601-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690601
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690601
    reference: chr 15
allele count: 2
allele frequency: 1.658292290599141e-5
allele num: 120606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.135G>T
  hgvsp: ENST00000559188.1:c.135G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.429G>T
  hgvsp: ENST00000557856.1:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.429G>T
  hgvsp: ENST00000360948.2:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.429G>T
  hgvsp: ENST00000317501.3:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.429G>T
  hgvsp: ENST00000558676.1:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.429G>T
  hgvsp: ENST00000357724.2:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.429G>T
  hgvsp: ENST00000540489.2:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.429G>T
  hgvsp: ENST00000394480.2:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.429G>T
  hgvsp: ENST00000355254.2:c.429G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.135G>T
  hgvsp: ENST00000542733.2:c.135G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser143Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

15-88690601-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690601
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690601
    reference: chr 15
allele count: 2
allele frequency: 1.658292290599141e-5
allele num: 120606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.429G>A
  hgvsp: ENST00000540489.2:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.429G>A
  hgvsp: ENST00000558676.1:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.429G>A
  hgvsp: ENST00000317501.3:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.429G>A
  hgvsp: ENST00000357724.2:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.429G>A
  hgvsp: ENST00000557856.1:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.429G>A
  hgvsp: ENST00000355254.2:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.429G>A
  hgvsp: ENST00000360948.2:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.135G>A
  hgvsp: ENST00000559188.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.429G>A
  hgvsp: ENST00000394480.2:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.135G>A
  hgvsp: ENST00000542733.2:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser143Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

15-88690602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690602
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690602
    reference: chr 15
allele count: 2
allele frequency: 1.658072325114821e-5
allele num: 120622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.428C>T
  hgvsp: ENSP00000453959.1:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.428C>T
  hgvsp: ENSP00000377990.1:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.428C>T
  hgvsp: ENSP00000354207.2:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.428C>T
  hgvsp: ENSP00000350356.2:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.134C>T
  hgvsp: ENSP00000473656.1:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.428C>T
  hgvsp: ENSP00000318328.3:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.428C>T
  hgvsp: ENSP00000444673.2:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.428C>T
  hgvsp: ENSP00000453511.1:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.134C>T
  hgvsp: ENSP00000437773.2:p.Ser45Leu
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.428C>T
  hgvsp: ENSP00000347397.2:p.Ser143Leu
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18554
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser143Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-88690607-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690607
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690607
    reference: chr 15
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.423A>G
  hgvsp: ENST00000394480.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.423A>G
  hgvsp: ENST00000317501.3:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.423A>G
  hgvsp: ENST00000355254.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.423A>G
  hgvsp: ENST00000558676.1:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.129A>G
  hgvsp: ENST00000559188.1:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.129A>G
  hgvsp: ENST00000542733.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.423A>G
  hgvsp: ENST00000360948.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.423A>G
  hgvsp: ENST00000357724.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.423A>G
  hgvsp: ENST00000540489.2:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.423A>G
  hgvsp: ENST00000557856.1:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr141Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

15-88690617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690617
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690617
    reference: chr 15
allele count: 2
allele frequency: 1.658264791721942e-5
allele num: 120608
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.413G>A
  hgvsp: ENSP00000318328.3:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.413G>A
  hgvsp: ENSP00000444673.2:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.119G>A
  hgvsp: ENSP00000437773.2:p.Arg40Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.413G>A
  hgvsp: ENSP00000354207.2:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.413G>A
  hgvsp: ENSP00000453511.1:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.413G>A
  hgvsp: ENSP00000377990.1:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.413G>A
  hgvsp: ENSP00000347397.2:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.119G>A
  hgvsp: ENSP00000473656.1:p.Arg40Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.413G>A
  hgvsp: ENSP00000453959.1:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.413G>A
  hgvsp: ENSP00000350356.2:p.Arg138Gln
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg138Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-88690618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690618
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690618
    reference: chr 15
allele count: 9
allele frequency: 7.462315307696135e-5
allele num: 120606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.412C>T
  hgvsp: ENSP00000377990.1:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.118C>T
  hgvsp: ENSP00000473656.1:p.Arg40Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.412C>T
  hgvsp: ENSP00000453959.1:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.412C>T
  hgvsp: ENSP00000347397.2:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.412C>T
  hgvsp: ENSP00000444673.2:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.412C>T
  hgvsp: ENSP00000350356.2:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.118C>T
  hgvsp: ENSP00000437773.2:p.Arg40Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.412C>T
  hgvsp: ENSP00000318328.3:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.412C>T
  hgvsp: ENSP00000453511.1:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.412C>T
  hgvsp: ENSP00000354207.2:p.Arg138Trp
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg138Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

15-88690628-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690628
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690628
    reference: chr 15
allele count: 45
allele frequency: 3.733386430384788e-4
allele num: 120534
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.402G>C
  hgvsp: ENST00000360948.2:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.402G>C
  hgvsp: ENST00000355254.2:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.108G>C
  hgvsp: ENST00000559188.1:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.402G>C
  hgvsp: ENST00000540489.2:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.402G>C
  hgvsp: ENST00000317501.3:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.108G>C
  hgvsp: ENST00000542733.2:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.402G>C
  hgvsp: ENST00000357724.2:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.402G>C
  hgvsp: ENST00000557856.1:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.402G>C
  hgvsp: ENST00000558676.1:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.402G>C
  hgvsp: ENST00000394480.2:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18621
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 38658
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu134Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

15-88690643-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690643
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690643
    reference: chr 15
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-9A>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

15-88690645-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690645
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690645
    reference: chr 15
allele count: 84
allele frequency: 7.002100630189057e-4
allele num: 119964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-11C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23297
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18357
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7608
  bin: 9.75e1
  variant carriers: 84
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

15-88690655-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690655
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690655
    reference: chr 15
allele count: 2
allele frequency: 1.674004385891491e-5
allele num: 119474
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-21C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-21C>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

15-88690657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690657
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690657
    reference: chr 15
allele count: 1
allele frequency: 8.374648264772879e-6
allele num: 119408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-23C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

15-88690674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690674
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690674
    reference: chr 15
allele count: 1
allele frequency: 8.435686327439601e-6
allele num: 118544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-40G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11791
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7528
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum

15-88690676-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690676
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690676
    reference: chr 15
allele count: 1
allele frequency: 8.451085119329322e-6
allele num: 118328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-42C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

15-88690677-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88690677
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88690677
    reference: chr 15
allele count: 1
allele frequency: 8.462957634434082e-6
allele num: 118162
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.102-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.102-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.396-43C>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4274
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4758
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

15-88726599-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726599
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726599
    reference: chr 15
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+50G>C
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

15-88726604-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726604
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726604
    reference: chr 15
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+45C>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+45C>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

15-88726607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726607
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726607
    reference: chr 15
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+42G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6277
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

15-88726614-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726614
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726614
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+35A>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

15-88726616-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726616
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726616
    reference: chr 15
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+33A>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP

15-88726622-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726622
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726622
    reference: chr 15
allele count: 5
allele frequency: 4.118548294097296e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+27G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/15-88726623-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726623
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726623
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+26T>G
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-88726631-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726631
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726631
    reference: chr 15
allele count: 12
allele frequency: 9.884678747940691e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+18G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

15-88726634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726634
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726634
    reference: chr 15
allele count: 146
allele frequency: 1.202655727441968e-3
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+15G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+15G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3006
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 9.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/15-88726639-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726639
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726639
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+10G>T
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+10G>T
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

15-88726646-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726646
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726646
    reference: chr 15
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.101+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.395+3G>A
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.101+3G>A
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: c.395+3G>A
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

15-88726650-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726650
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726650
    reference: chr 15
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.394A>G
  hgvsp: ENSP00000377990.1:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.394A>G
  hgvsp: ENSP00000444673.2:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.394A>G
  hgvsp: ENSP00000354207.2:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.394A>G
  hgvsp: ENSP00000318328.3:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.100A>G
  hgvsp: ENSP00000473656.1:p.Ile34Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.394A>G
  hgvsp: ENSP00000453959.1:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.394A>G
  hgvsp: ENSP00000453511.1:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.100A>G
  hgvsp: ENSP00000437773.2:p.Ile34Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.394A>G
  hgvsp: ENSP00000350356.2:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.394A>G
  hgvsp: ENSP00000347397.2:p.Ile132Val
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile132Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

15-88726651-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726651
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726651
    reference: chr 15
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.393T>C
  hgvsp: ENST00000357724.2:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.393T>C
  hgvsp: ENST00000317501.3:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.393T>C
  hgvsp: ENST00000394480.2:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.99T>C
  hgvsp: ENST00000542733.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.99T>C
  hgvsp: ENST00000559188.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.393T>C
  hgvsp: ENST00000558676.1:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.393T>C
  hgvsp: ENST00000360948.2:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.393T>C
  hgvsp: ENST00000540489.2:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.393T>C
  hgvsp: ENST00000557856.1:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.393T>C
  hgvsp: ENST00000355254.2:c.393T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.393T>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

15-88726655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726655
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726655
    reference: chr 15
allele count: 4
allele frequency: 3.294838635277837e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.389G>A
  hgvsp: ENSP00000354207.2:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.95G>A
  hgvsp: ENSP00000473656.1:p.Arg32His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.389G>A
  hgvsp: ENSP00000453959.1:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.389G>A
  hgvsp: ENSP00000350356.2:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.389G>A
  hgvsp: ENSP00000318328.3:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.389G>A
  hgvsp: ENSP00000453511.1:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.95G>A
  hgvsp: ENSP00000437773.2:p.Arg32His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.389G>A
  hgvsp: ENSP00000377990.1:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.389G>A
  hgvsp: ENSP00000347397.2:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.389G>A
  hgvsp: ENSP00000444673.2:p.Arg130His
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg130His
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum

15-88726667-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726667
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726667
    reference: chr 15
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.377A>G
  hgvsp: ENSP00000453511.1:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.377A>G
  hgvsp: ENSP00000444673.2:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.377A>G
  hgvsp: ENSP00000347397.2:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.377A>G
  hgvsp: ENSP00000453959.1:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.83A>G
  hgvsp: ENSP00000473656.1:p.Asn28Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.377A>G
  hgvsp: ENSP00000354207.2:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.377A>G
  hgvsp: ENSP00000318328.3:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.377A>G
  hgvsp: ENSP00000350356.2:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.83A>G
  hgvsp: ENSP00000437773.2:p.Asn28Ser
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.377A>G
  hgvsp: ENSP00000377990.1:p.Asn126Ser
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn126Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

15-88726694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726694
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726694
    reference: chr 15
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.350G>A
  hgvsp: ENSP00000347397.2:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.350G>A
  hgvsp: ENSP00000444673.2:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.350G>A
  hgvsp: ENSP00000318328.3:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.350G>A
  hgvsp: ENSP00000453959.1:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.350G>A
  hgvsp: ENSP00000377990.1:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.350G>A
  hgvsp: ENSP00000453511.1:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.350G>A
  hgvsp: ENSP00000354207.2:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.350G>A
  hgvsp: ENSP00000350356.2:p.Ser117Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.56G>A
  hgvsp: ENSP00000473656.1:p.Ser19Asn
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.56G>A
  hgvsp: ENSP00000437773.2:p.Ser19Asn
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3521
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser117Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

15-88726697-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726697
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726697
    reference: chr 15
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.347G>A
  hgvsp: ENSP00000453511.1:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.347G>A
  hgvsp: ENSP00000354207.2:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.347G>A
  hgvsp: ENSP00000453959.1:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.347G>A
  hgvsp: ENSP00000347397.2:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.347G>A
  hgvsp: ENSP00000444673.2:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.53G>A
  hgvsp: ENSP00000473656.1:p.Arg18Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.347G>A
  hgvsp: ENSP00000350356.2:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.347G>A
  hgvsp: ENSP00000318328.3:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.53G>A
  hgvsp: ENSP00000437773.2:p.Arg18Gln
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.347G>A
  hgvsp: ENSP00000377990.1:p.Arg116Gln
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg116Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

15-88726698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726698
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726698
    reference: chr 15
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.52C>T
  hgvsp: ENSP00000473656.1:p.Arg18Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.346C>T
  hgvsp: ENSP00000453959.1:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.52C>T
  hgvsp: ENSP00000437773.2:p.Arg18Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.346C>T
  hgvsp: ENSP00000444673.2:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.346C>T
  hgvsp: ENSP00000354207.2:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.346C>T
  hgvsp: ENSP00000453511.1:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.346C>T
  hgvsp: ENSP00000377990.1:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.346C>T
  hgvsp: ENSP00000318328.3:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.346C>T
  hgvsp: ENSP00000347397.2:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.346C>T
  hgvsp: ENSP00000350356.2:p.Arg116Trp
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4800
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg116Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

15-88726712-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 88726712
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 88726712
    reference: chr 15
allele count: 2
allele frequency: 1.648233917357551e-5
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000444673
  ensembl transcript: ENST00000540489
  gene symbol: NTRK3
  hgvsc: ENST00000540489.2:c.332A>G
  hgvsp: ENSP00000444673.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000350356
  ensembl transcript: ENST00000357724
  gene symbol: NTRK3
  hgvsc: ENST00000357724.2:c.332A>G
  hgvsp: ENSP00000350356.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453959
  ensembl transcript: ENST00000557856
  gene symbol: NTRK3
  hgvsc: ENST00000557856.1:c.332A>G
  hgvsp: ENSP00000453959.1:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000437773
  ensembl transcript: ENST00000542733
  gene symbol: NTRK3
  hgvsc: ENST00000542733.2:c.38A>G
  hgvsp: ENSP00000437773.2:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000377990
  ensembl transcript: ENST00000394480
  gene symbol: NTRK3
  hgvsc: ENST00000394480.2:c.332A>G
  hgvsp: ENSP00000377990.1:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000354207
  ensembl transcript: ENST00000360948
  gene symbol: NTRK3
  hgvsc: ENST00000360948.2:c.332A>G
  hgvsp: ENSP00000354207.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000473656
  ensembl transcript: ENST00000559188
  gene symbol: NTRK3
  hgvsc: ENST00000559188.1:c.38A>G
  hgvsp: ENSP00000473656.1:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000453511
  ensembl transcript: ENST00000558676
  gene symbol: NTRK3
  hgvsc: ENST00000558676.1:c.332A>G
  hgvsp: ENSP00000453511.1:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000347397
  ensembl transcript: ENST00000355254
  gene symbol: NTRK3
  hgvsc: ENST00000355254.2:c.332A>G
  hgvsp: ENSP00000347397.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140538
  ensembl protein: ENSP00000318328
  ensembl transcript: ENST00000317501
  gene symbol: NTRK3
  hgvsc: ENST00000317501.3:c.332A>G
  hgvsp: ENSP00000318328.3:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/8033
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys111Arg
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13703
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.656781205474005e-5
allele num: 60358
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

QD
type: SiteQuality
SIO_000300: 1.16e1

MQ
type: SiteQuality
SIO_000300: 5.723e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.085e0

DP
type: SiteQuality
SIO_000300: 1.337328e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 3997
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3645
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20932
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13805
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 726
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.596928982725528e-5
allele num: 10420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7868
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.187e0

MQ
type: SiteQuality
SIO_000300: 5.79e1

FS
type: SiteQuality
SIO_000300: 1.128e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.335599e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

GenotypeQuality
all individuals: 7910
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5446
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15553
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 636
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.78334011667345e-5
allele num: 14742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5704
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.218e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.276e0

DP
type: SiteQuality
SIO_000300: 1.19897e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4236
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 447
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4693
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5443
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7875
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.250731487733513e-4
allele num: 8886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5684
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.19546e6

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.466e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.097e1

GenotypeQuality
all individuals: 1888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5565
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15918
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4997
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.879470460383324e-5
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.180745e6

QD
type: SiteQuality
SIO_000300: 1.369e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

FS
type: SiteQuality
SIO_000300: 9.881e0

VQSLOD
type: SiteQuality
SIO_000300: -3.885e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeQuality
all individuals: 5704
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4235
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 99
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 552
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.739190928380118e-5
allele num: 57498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.685e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

DP
type: SiteQuality
SIO_000300: 1.157766e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.569e-1

InbreedingCoeff
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SIO_000300: -3.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.864e1

BaseQRankSum
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SIO_000300: -2.161e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56192
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.668378576669112e-4
allele num: 5452
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 2.22e0

ReadPosRankSum
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SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 7.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.1039e1

QD
type: SiteQuality
SIO_000300: 1.513e1

DP
type: SiteQuality
SIO_000300: 1.123296e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 1.070931353300253e-4
allele num: 56026
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.173158141717503e-4
allele num: 8524
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.469331112961421e-4
allele num: 14412
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.298701298701299e-3
allele num: 770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.362397820163488e-4
allele num: 7340
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.023960679909891e-4
allele num: 9766
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.313e1

FS
type: SiteQuality
SIO_000300: 1.548e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.121328e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.815936660129295e-5
allele num: 55068
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.45e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.695e1

DP
type: SiteQuality
SIO_000300: 1.099871e6

VQSLOD
type: SiteQuality
SIO_000300: -1.255e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.875679933976066e-5
allele num: 53314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9254
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

DP
type: SiteQuality
SIO_000300: 1.087635e6

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.915e1

ClippingRankSum
type: SiteQuality
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FS
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SIO_000300: 2.093e0

VQSLOD
type: SiteQuality
SIO_000300: -1.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

East Asian
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allele count: 6
allele frequency: 8.573878250928837e-4
allele num: 6998
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 53308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.534354190321294e-5
allele num: 65174
num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.183431952662722e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
type: Population
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.535249324490297e-5
allele num: 65136
num of homozygotes: 0

VQSLOD
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DP
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.534919416730622e-5
allele num: 65150
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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MQRankSum
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MQ
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 3.069838833461244e-5
allele num: 65150
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8420
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 65262
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

FS
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MQ
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele count: 1
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Other
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VQSLOD
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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num of homozygotes: 0

European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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South Asian
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MQ
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MQRankSum
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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MQ
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BaseQRankSum
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VQSLOD
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DP
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.778089887640449e-5
allele num: 11392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.120758847136082e-5
allele num: 65784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.461e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.388e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-2

DP
type: SiteQuality
SIO_000300: 1.76479e6

VQSLOD
type: SiteQuality
SIO_000300: 8.21e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.514921981517952e-5
allele num: 66010
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.982e0

ReadPosRankSum
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SIO_000300: 5.97e-1

DP
type: SiteQuality
SIO_000300: 1.779563e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

FS
type: SiteQuality
SIO_000300: 2.1812e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.239e0

QD
type: SiteQuality
SIO_000300: 1.699e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1880
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51437138443832e-5
allele num: 66034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.781414e6

FS
type: SiteQuality
SIO_000300: 2.748e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.509e0

VQSLOD
type: SiteQuality
SIO_000300: -1.885e0

QD
type: SiteQuality
SIO_000300: 4.46e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 84
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.902e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 5.056e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.274e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.782616e6

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.445e0

QD
type: SiteQuality
SIO_000300: 6.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e0

GenotypeDepth
all individuals: 197
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variant carriers: 0

GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1462
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GenotypeQuality
all individuals: 2222
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.053635207942369e-5
allele num: 66076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.327e1

DP
type: SiteQuality
SIO_000300: 1.783145e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

FS
type: SiteQuality
SIO_000300: 3.839e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 680
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.220554131575735e-4
allele num: 16386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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BaseQRankSum
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SIO_000300: 4.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

FS
type: SiteQuality
SIO_000300: 1.313e0

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

ClippingRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.785704e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 3
allele frequency: 2.94521892794031e-4
allele num: 10186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66104
num of homozygotes: 0

South Asian
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allele count: 0
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QD
type: SiteQuality
SIO_000300: 1.855e1

InbreedingCoeff
type: SiteQuality
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.942e1

VQSLOD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023614428688054e-5
allele num: 66146
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0960741282614e-5
allele num: 16404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
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MQ
type: SiteQuality
SIO_000300: 5.939e1

MQRankSum
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DP
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FS
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510802235987309e-5
allele num: 66190
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQRankSum
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SIO_000300: 7.41e-1

VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.81e-1

FS
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SIO_000300: 0.0e0

QD
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SIO_000300: 9.69e0

BaseQRankSum
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SIO_000300: -3.022e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.021604471974619e-5
allele num: 66190
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.812e0

MQRankSum
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BaseQRankSum
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SIO_000300: -3.593e0

ClippingRankSum
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SIO_000300: 1.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.78e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.789366e6

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

QD
type: SiteQuality
SIO_000300: 1.12e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.020691738408095e-5
allele num: 66210
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 2.0e-4

ClippingRankSum
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ReadPosRankSum
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QD
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MQ
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VQSLOD
type: SiteQuality
SIO_000300: 9.01e-1

MQRankSum
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SIO_000300: 8.8e-1

FS
type: SiteQuality
SIO_000300: 2.941e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.091e0

DP
type: SiteQuality
SIO_000300: 1.790291e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020691738408095e-5
allele num: 66210
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.146e1

FS
type: SiteQuality
SIO_000300: 2.941e0

ReadPosRankSum
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SIO_000300: 8.21e-1

MQ
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BaseQRankSum
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SIO_000300: -1.091e0

InbreedingCoeff
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SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.790291e6

VQSLOD
type: SiteQuality
SIO_000300: 9.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.790483649892304e-5
allele num: 10214
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.217285453438831e-4
allele num: 16430
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.041200990756963e-5
allele num: 66212
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 3.489183531053733e-4
allele num: 11464
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.104e0

BaseQRankSum
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QD
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ClippingRankSum
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SIO_000300: -3.09e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66212
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.722958827634333e-5
allele num: 11464
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509251713000694e-5
allele num: 66258
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.780907668231612e-5
allele num: 10224
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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QD
type: SiteQuality
SIO_000300: 1.201e1

DP
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MQ
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73973556019485e-4
allele num: 11496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

FS
type: SiteQuality
SIO_000300: 3.333e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

DP
type: SiteQuality
SIO_000300: 1.795354e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.211e1

GenotypeQuality
all individuals: 459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.953506544246923e-4
allele num: 10238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.211e1

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

DP
type: SiteQuality
SIO_000300: 1.795354e6

FS
type: SiteQuality
SIO_000300: 3.333e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 451
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015499668295036e-5
allele num: 66324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.795177e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

FS
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.097e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2221
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variant carriers: 0

GenotypeQuality
all individuals: 7558
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 6089
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38989
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507613447911955e-5
allele num: 66330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.224e1

FS
type: SiteQuality
SIO_000300: 9.94e-1

DP
type: SiteQuality
SIO_000300: 1.795266e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.049e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.407e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7560
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6083
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variant carriers: 0

GenotypeQuality
all individuals: 1891
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
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GenotypeQuality
all individuals: 672
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508250128201261e-5
allele num: 66302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.794897e6

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 38950
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1887
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variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016773259321829e-5
allele num: 66296
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.85480093676815e-4
allele num: 10248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.79535e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.187e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

FS
type: SiteQuality
SIO_000300: 3.427e0

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 45

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73973556019485e-4
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 35
allele frequency: 4.055619930475087e-3
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-4
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.826372823572385e-4
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.037918125830214e-5
allele num: 66248
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.265e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

FS
type: SiteQuality
SIO_000300: 1.287e0

MQRankSum
type: SiteQuality
SIO_000300: 6.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 1.793831e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 1.778544e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.403e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -3.0e-4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 9.612023767913317e-4
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.546694553059925e-5
allele num: 65982
num of homozygotes: 0

African
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allele count: 70
allele frequency: 6.889763779527559e-3
allele num: 10160
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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DP
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.34192037470726e-4
allele num: 8540
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65716
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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VQSLOD
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MQRankSum
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FS
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DP
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 8.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.16e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65682
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
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allele frequency: 1.172058134083451e-4
allele num: 8532
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.005e0

ClippingRankSum
type: SiteQuality
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FS
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BaseQRankSum
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SIO_000300: -4.068e0

QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.187353050365054e-5
allele num: 16162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.61759e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.124e0

MQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

VQSLOD
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BaseQRankSum
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SIO_000300: -4.915e0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.918e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.55e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.986019572598362e-5
allele num: 10014
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Other
type: Population
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65106
num of homozygotes: 0

South Asian
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
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SIO_000300: 1.605727e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.538319539734794e-5
allele num: 65006
num of homozygotes: 0

Other
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East Asian
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

African
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MQ
type: SiteQuality
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FS
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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Other
type: Population
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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DP
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QD
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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Other
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66732
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Other
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East Asian
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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FS
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BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 8.991188635137565e-5
allele num: 66732
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.495e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.397e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.44e-1

VQSLOD
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BaseQRankSum
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SIO_000300: -9.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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QD
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DP
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FS
type: SiteQuality
SIO_000300: 7.58e-1

BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 2.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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Latino
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African
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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DP
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 6.909656244601831e-4
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 1.326667948471448e-2
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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DP
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MQ
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MQRankSum
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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MQ
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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European (Non-Finnish)
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African
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East Asian
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Latino
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South Asian
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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Other
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VQSLOD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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ReadPosRankSum
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MQ
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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African
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Latino
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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DP
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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East Asian
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African
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South Asian
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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BaseQRankSum
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FS
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ClippingRankSum
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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South Asian
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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FS
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MQ
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QD
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