14-77919592-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919592
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919592
    reference: chr 14
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+50C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+50C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+50C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+50C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+50C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+50C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+50C>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29099
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

14-77919593-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919593
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919593
    reference: chr 14
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+49A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+49A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+49A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+49A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+49A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+49A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+49A>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29097
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

14-77919593-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919593
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919593
    reference: chr 14
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+49A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+49A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+49A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+49A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+49A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+49A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+49A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29097
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

14-77919594-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919594
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919594
    reference: chr 14
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+48C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+48C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+48C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+48C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+48C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+48C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+48C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29094
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56131
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

14-77919595-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919595
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919595
    reference: chr 14
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+47T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+47T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+47T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+47T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+47T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+47T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+47T>C
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29093
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56129
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

14-77919597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919597
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919597
    reference: chr 14
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+45T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+45T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+45T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+45T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+45T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+45T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+45T>C
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29092
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56129
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

14-77919599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919599
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919599
    reference: chr 14
allele count: 39
allele frequency: 3.212414747454779e-4
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+43C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29093
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

14-77919613-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919613
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919613
    reference: chr 14
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+29A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+29A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+29A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+29A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+29A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+29A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+29A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29080
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

14-77919614-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919614
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919614
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+28T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+28T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+28T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+28T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+28T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+28T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+28T>C
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56131
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-77919615-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919615
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919615
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+27A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+27A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+27A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+27A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+27A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+27A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+27A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

14-77919616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919616
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919616
    reference: chr 14
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+26G>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56130
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

14-77919620-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919620
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919620
    reference: chr 14
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+22C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+22C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+22C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+22C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+22C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+22C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+22C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29079
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56130
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

14-77919620-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919620
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919619
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+21delG
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+21delG
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+21delG
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+21delG
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+21delG
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+21delG
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+21delG
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: GC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

14-77919623-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919623
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919623
    reference: chr 14
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+19A>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+19A>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+19A>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+19A>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+19A>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+19A>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+19A>C
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29078
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

14-77919627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919627
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919627
    reference: chr 14
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+15C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+15C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+15C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+15C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+15C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+15C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+15C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4333
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29078
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/14-77919629-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919629
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919629
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+13G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+13G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+13G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+13G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+13G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+13G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+13G>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56130
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

14-77919629-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919629
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919629
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+13G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+13G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+13G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+13G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+13G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+13G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+13G>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29076
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS

14-77919630-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919630
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919630
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+12A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+12A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+12A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+12A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+12A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+12A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+12A>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29076
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56129
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

14-77919630-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919630
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919630
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+12A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+12A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+12A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+12A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+12A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+12A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+12A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

14-77919635-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919635
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919635
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+7A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+7A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+7A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+7A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+7A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+7A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+7A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.196+7A>G
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/14-77919641-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919641
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919641
    reference: chr 14
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.274+1G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.196+1G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.196+1G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.196+1G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.196+1G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.86+1G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.196+1G>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29076
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: c.196+1G>T
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-77919651-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919651
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919651
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.265C>A
  hgvsp: ENSP00000451857.1:p.Pro89Thr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.187C>A
  hgvsp: ENSP00000404815.2:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.187C>A
  hgvsp: ENSP00000313098.4:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.187C>A
  hgvsp: ENSP00000452181.1:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.187C>A
  hgvsp: ENSP00000452191.1:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.187C>A
  hgvsp: ENSP00000339122.2:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.77C>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29074
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro63Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

14-77919654-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919654
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919654
    reference: chr 14
allele count: 12
allele frequency: 9.883864591055103e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.184G>A
  hgvsp: ENSP00000313098.4:p.Glu62Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.262G>A
  hgvsp: ENSP00000451857.1:p.Glu88Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.184G>A
  hgvsp: ENSP00000339122.2:p.Glu62Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.184G>A
  hgvsp: ENSP00000452181.1:p.Glu62Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.74G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.184G>A
  hgvsp: ENSP00000404815.2:p.Glu62Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.184G>A
  hgvsp: ENSP00000452191.1:p.Glu62Lys
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29074
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu62Lys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

14-77919665-CTGACTCGCTCCAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919665
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919651
    reference: chr 14
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsp: ENSP00000339122.2:p.Asp53GlufsTer20
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsp: ENSP00000404815.2:p.Asp53GlufsTer10
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsp: ENSP00000313098.4:p.Asp53GlufsTer20
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsp: ENSP00000452191.1:p.Asp53GlufsTer20
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsp: ENSP00000451857.1:p.Asp79GlufsTer20
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsp: ENSP00000452181.1:p.Asp53GlufsTer20
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29070
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56128
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp53GlufsTer20
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: CTGACTCGCTCCAGG
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

14-77919667-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919667
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919667
    reference: chr 14
allele count: 31
allele frequency: 2.553331686022568e-4
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.171C>G
  hgvsp: ENST00000343765.2:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.171C>G
  hgvsp: ENST00000327028.4:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.249C>G
  hgvsp: ENST00000556412.1:c.249C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.61C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.171C>G
  hgvsp: ENST00000448935.2:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.171C>G
  hgvsp: ENST00000553888.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.171C>G
  hgvsp: ENST00000557658.1:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29071
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val57Val
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

14-77919671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919671
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919671
    reference: chr 14
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.245G>A
  hgvsp: ENSP00000451857.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.167G>A
  hgvsp: ENSP00000452191.1:p.Arg56Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.167G>A
  hgvsp: ENSP00000313098.4:p.Arg56Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.57G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.167G>A
  hgvsp: ENSP00000339122.2:p.Arg56Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.167G>A
  hgvsp: ENSP00000452181.1:p.Arg56Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.167G>A
  hgvsp: ENSP00000404815.2:p.Arg56Gln
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29052
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg56Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

14-77919672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919672
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919672
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.166C>T
  hgvsp: ENSP00000452191.1:p.Arg56Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.166C>T
  hgvsp: ENSP00000452181.1:p.Arg56Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.166C>T
  hgvsp: ENSP00000339122.2:p.Arg56Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.166C>T
  hgvsp: ENSP00000313098.4:p.Arg56Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.166C>T
  hgvsp: ENSP00000404815.2:p.Arg56Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.56C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.244C>T
  hgvsp: ENSP00000451857.1:p.Arg82Ter
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29048
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg56Ter
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

14-77919672-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919672
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919672
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.166C>G
  hgvsp: ENSP00000313098.4:p.Arg56Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.56C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.166C>G
  hgvsp: ENSP00000404815.2:p.Arg56Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.166C>G
  hgvsp: ENSP00000339122.2:p.Arg56Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.244C>G
  hgvsp: ENSP00000451857.1:p.Arg82Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.166C>G
  hgvsp: ENSP00000452191.1:p.Arg56Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.166C>G
  hgvsp: ENSP00000452181.1:p.Arg56Gly
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29048
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg56Gly
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

14-77919687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919687
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.41G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.151G>A
  hgvsp: ENSP00000339122.2:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.151G>A
  hgvsp: ENSP00000452191.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.151G>A
  hgvsp: ENSP00000313098.4:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.151G>A
  hgvsp: ENSP00000404815.2:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.151G>A
  hgvsp: ENSP00000452181.1:p.Asp51Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.229G>A
  hgvsp: ENSP00000451857.1:p.Asp77Asn
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29047
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp51Asn
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

14-77919688-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919688
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919688
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.150C>T
  hgvsp: ENST00000327028.4:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.40C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.150C>T
  hgvsp: ENST00000557658.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.150C>T
  hgvsp: ENST00000343765.2:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.150C>T
  hgvsp: ENST00000448935.2:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.150C>T
  hgvsp: ENST00000553888.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.228C>T
  hgvsp: ENST00000556412.1:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29047
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp50Asp
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

14-77919688-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919688
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919688
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.150C>A
  hgvsp: ENSP00000313098.4:p.Asp50Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.228C>A
  hgvsp: ENSP00000451857.1:p.Asp76Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.150C>A
  hgvsp: ENSP00000452181.1:p.Asp50Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.150C>A
  hgvsp: ENSP00000404815.2:p.Asp50Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.150C>A
  hgvsp: ENSP00000452191.1:p.Asp50Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.40C>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.150C>A
  hgvsp: ENSP00000339122.2:p.Asp50Glu
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29047
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56126
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp50Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS

14-77919689-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919689
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919689
    reference: chr 14
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.149A>G
  hgvsp: ENSP00000404815.2:p.Asp50Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.149A>G
  hgvsp: ENSP00000313098.4:p.Asp50Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.149A>G
  hgvsp: ENSP00000339122.2:p.Asp50Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.149A>G
  hgvsp: ENSP00000452181.1:p.Asp50Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.149A>G
  hgvsp: ENSP00000452191.1:p.Asp50Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.39A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.227A>G
  hgvsp: ENSP00000451857.1:p.Asp76Gly
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29047
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp50Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/14-77919690-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919690
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919691
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: CA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.147dupT
  hgvsp: ENSP00000452181.1:p.Asp50Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.37dupT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.147dupT
  hgvsp: ENSP00000313098.4:p.Asp50Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.225dupT
  hgvsp: ENSP00000451857.1:p.Asp76Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.147dupT
  hgvsp: ENSP00000452191.1:p.Asp50Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.147dupT
  hgvsp: ENSP00000339122.2:p.Asp50Ter
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.147dupT
  hgvsp: ENSP00000404815.2:p.Asp50Ter
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29046
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp50Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/14-77919699-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919699
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919699
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.139G>T
  hgvsp: ENSP00000313098.4:p.Asp47Tyr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.139G>T
  hgvsp: ENSP00000404815.2:p.Asp47Tyr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.217G>T
  hgvsp: ENSP00000451857.1:p.Asp73Tyr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.139G>T
  hgvsp: ENSP00000452191.1:p.Asp47Tyr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.139G>T
  hgvsp: ENSP00000339122.2:p.Asp47Tyr
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.139G>T
  hgvsp: ENSP00000452181.1:p.Asp47Tyr
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29045
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp47Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

14-77919702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919702
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919702
    reference: chr 14
allele count: 169
allele frequency: 1.391977596573594e-3
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.214G>A
  hgvsp: ENSP00000451857.1:p.Val72Met
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.26G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.136G>A
  hgvsp: ENSP00000452181.1:p.Val46Met
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.136G>A
  hgvsp: ENSP00000452191.1:p.Val46Met
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.136G>A
  hgvsp: ENST00000557466.1:c.136G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.136G>A
  hgvsp: ENSP00000404815.2:p.Val46Met
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.136G>A
  hgvsp: ENSP00000313098.4:p.Val46Met
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.136G>A
  hgvsp: ENSP00000339122.2:p.Val46Met
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29082
  bin: 9.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val46Met
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-77919710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919710
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919710
    reference: chr 14
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.128G>A
  hgvsp: ENSP00000404815.2:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.128G>A
  hgvsp: ENSP00000452181.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.128G>A
  hgvsp: ENSP00000452191.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.206G>A
  hgvsp: ENSP00000451857.1:p.Arg69Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.128G>A
  hgvsp: ENSP00000452176.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.128G>A
  hgvsp: ENSP00000313098.4:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.128G>A
  hgvsp: ENSP00000339122.2:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29011
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg43Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

14-77919711-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919711
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919711
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.127C>G
  hgvsp: ENSP00000313098.4:p.Arg43Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.127C>G
  hgvsp: ENSP00000339122.2:p.Arg43Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.205C>G
  hgvsp: ENSP00000451857.1:p.Arg69Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.127C>G
  hgvsp: ENSP00000452191.1:p.Arg43Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.17C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.127C>G
  hgvsp: ENSP00000452181.1:p.Arg43Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.127C>G
  hgvsp: ENSP00000404815.2:p.Arg43Gly
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.127C>G
  hgvsp: ENSP00000452176.1:p.Arg43Gly
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29009
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg43Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

14-77919714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919714
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919714
    reference: chr 14
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.124C>T
  hgvsp: ENSP00000339122.2:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.124C>T
  hgvsp: ENSP00000452181.1:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.14C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.124C>T
  hgvsp: ENSP00000452191.1:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.124C>T
  hgvsp: ENSP00000404815.2:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.124C>T
  hgvsp: ENSP00000452176.1:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.124C>T
  hgvsp: ENSP00000313098.4:p.Leu42Phe
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.202C>T
  hgvsp: ENSP00000451857.1:p.Leu68Phe
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu42Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-77919725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919725
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919725
    reference: chr 14
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.113C>T
  hgvsp: ENSP00000452191.1:p.Ala38Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.113C>T
  hgvsp: ENSP00000313098.4:p.Ala38Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.113C>T
  hgvsp: ENSP00000452176.1:p.Ala38Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.113C>T
  hgvsp: ENSP00000339122.2:p.Ala38Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.113C>T
  hgvsp: ENSP00000404815.2:p.Ala38Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.113C>T
  hgvsp: ENSP00000452181.1:p.Ala38Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.191C>T
  hgvsp: ENSP00000451857.1:p.Ala64Val
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000553691
  gene symbol: VIPAS39
  hgvsc: ENST00000553691.1:n.3C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29009
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala38Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

14-77919728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919728
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919728
    reference: chr 14
allele count: 37
allele frequency: 3.047625323295389e-4
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.110G>A
  hgvsp: ENSP00000452191.1:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.110G>A
  hgvsp: ENSP00000404815.2:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.110G>A
  hgvsp: ENSP00000452181.1:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.110G>A
  hgvsp: ENSP00000452176.1:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.188G>A
  hgvsp: ENSP00000451857.1:p.Arg63Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.110G>A
  hgvsp: ENSP00000313098.4:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.110G>A
  hgvsp: ENSP00000339122.2:p.Arg37Gln
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29020
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg37Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

14-77919729-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919729
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919729
    reference: chr 14
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.109C>T
  hgvsp: ENSP00000404815.2:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.109C>T
  hgvsp: ENSP00000339122.2:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.109C>T
  hgvsp: ENSP00000313098.4:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.109C>T
  hgvsp: ENSP00000452181.1:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.109C>T
  hgvsp: ENSP00000452176.1:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.109C>T
  hgvsp: ENSP00000452191.1:p.Arg37Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.187C>T
  hgvsp: ENSP00000451857.1:p.Arg63Trp
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29007
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg37Trp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

14-77919731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919731
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919731
    reference: chr 14
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.185A>G
  hgvsp: ENSP00000451857.1:p.Lys62Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.107A>G
  hgvsp: ENSP00000452191.1:p.Lys36Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.107A>G
  hgvsp: ENSP00000452176.1:p.Lys36Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.107A>G
  hgvsp: ENSP00000339122.2:p.Lys36Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.107A>G
  hgvsp: ENSP00000313098.4:p.Lys36Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.107A>G
  hgvsp: ENSP00000404815.2:p.Lys36Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.107A>G
  hgvsp: ENSP00000452181.1:p.Lys36Arg
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29007
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys36Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-77919755-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919755
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919755
    reference: chr 14
allele count: 12
allele frequency: 9.885167306456661e-5
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-11T>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-11T>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-11T>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-11T>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-11T>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-11T>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-11T>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29006
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56110
  bin: 9.75e1
  variant carriers: 12
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

14-77919772-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919772
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919772
    reference: chr 14
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-28A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-28A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-28A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-28A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-28A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-28A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-28A>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/14-77919773-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919773
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919773
    reference: chr 14
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-29G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-29G>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56106
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

14-77919775-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919775
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919775
    reference: chr 14
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-31C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-31C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-31C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-31C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-31C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-31C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-31C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

14-77919784-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919784
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919784
    reference: chr 14
allele count: 4
allele frequency: 3.295598727898891e-5
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-40A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-40A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-40A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-40A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-40A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-40A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-40A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29000
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/14-77919790-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919790
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919790
    reference: chr 14
allele count: 1172
allele frequency: 9.656899904419761e-3
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-46G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-46G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-46G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-46G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-46G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-46G>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-46G>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 8.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 9.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28961
  bin: 9.75e1
  variant carriers: 572
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 7.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 8.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 6.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 70
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

14-77919794-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77919794
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77919794
    reference: chr 14
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.94-50G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.94-50G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.94-50G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.94-50G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.94-50G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.94-50G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.172-50G>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28857
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56082
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

14-77920307-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920307
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920307
    reference: chr 14
allele count: 1
allele frequency: 8.376191513242758e-6
allele num: 119386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+46T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+46T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+46T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+46T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+46T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+46T>C
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+46T>C
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6321
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

14-77920307-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920307
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920307
    reference: chr 14
allele count: 6
allele frequency: 5.025714907945655e-5
allele num: 119386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+46T>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+46T>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+46T>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+46T>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+46T>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+46T>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+46T>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14972
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10904
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

14-77920308-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920308
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920308
    reference: chr 14
allele count: 6
allele frequency: 5.015799769273211e-5
allele num: 119622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+45A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+45A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+45A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+45A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+45A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+45A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+45A>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15054
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10914
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24703
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

14-77920310-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920310
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920310
    reference: chr 14
allele count: 1
allele frequency: 8.370021929457456e-6
allele num: 119474
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+43C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+43C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25598
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6338
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

14-77920324-A-AAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920324
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920326
    reference: chr 14
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: AAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+27_93+28dupCT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+27_93+28dupCT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+27_93+28dupCT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+27_93+28dupCT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+27_93+28dupCT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+27_171+28dupCT
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+27_93+28dupCT
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10900
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

14-77920328-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920328
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920328
    reference: chr 14
allele count: 2
allele frequency: 1.661074382910867e-5
allele num: 120404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+25C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+25C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+25C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+25C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+25C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+25C>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+25C>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7234
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10901
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

14-77920329-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920329
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920329
    reference: chr 14
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.93+24A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.171+24A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.93+24A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.93+24A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.93+24A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.93+24A>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.93+24A>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10899
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

14-77920365-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920365
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920365
    reference: chr 14
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.81T>C
  hgvsp: ENST00000448935.2:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.81T>C
  hgvsp: ENST00000343765.2:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.81T>C
  hgvsp: ENST00000557466.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.159T>C
  hgvsp: ENST00000556412.1:c.159T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.81T>C
  hgvsp: ENST00000557658.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.81T>C
  hgvsp: ENST00000553888.1:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.81T>C
  hgvsp: ENST00000327028.4:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10902
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp27Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

14-77920368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920368
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920368
    reference: chr 14
allele count: 9
allele frequency: 7.418275333410263e-5
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.78C>T
  hgvsp: ENST00000557466.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.78C>T
  hgvsp: ENST00000327028.4:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.78C>T
  hgvsp: ENST00000343765.2:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.78C>T
  hgvsp: ENST00000448935.2:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.78C>T
  hgvsp: ENST00000553888.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.156C>T
  hgvsp: ENST00000556412.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.78C>T
  hgvsp: ENST00000557658.1:c.78C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35323
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp26Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-77920376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920376
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920376
    reference: chr 14
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.70G>A
  hgvsp: ENSP00000339122.2:p.Asp24Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.70G>A
  hgvsp: ENSP00000452181.1:p.Asp24Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.70G>A
  hgvsp: ENSP00000452176.1:p.Asp24Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.70G>A
  hgvsp: ENSP00000404815.2:p.Asp24Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.70G>A
  hgvsp: ENSP00000452191.1:p.Asp24Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.70G>A
  hgvsp: ENSP00000313098.4:p.Asp24Asn
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.148G>A
  hgvsp: ENSP00000451857.1:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp24Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-77920377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920377
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920377
    reference: chr 14
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.69C>T
  hgvsp: ENST00000448935.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.69C>T
  hgvsp: ENST00000557466.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.147C>T
  hgvsp: ENST00000556412.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.69C>T
  hgvsp: ENST00000343765.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.69C>T
  hgvsp: ENST00000553888.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.69C>T
  hgvsp: ENST00000327028.4:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.69C>T
  hgvsp: ENST00000557658.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10900
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35394
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp23Asp
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

14-77920391-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920391
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920391
    reference: chr 14
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.55G>C
  hgvsp: ENSP00000404815.2:p.Ala19Pro
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.55G>C
  hgvsp: ENSP00000339122.2:p.Ala19Pro
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.55G>C
  hgvsp: ENSP00000452176.1:p.Ala19Pro
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.133G>C
  hgvsp: ENSP00000451857.1:p.Ala45Pro
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.55G>C
  hgvsp: ENSP00000452181.1:p.Ala19Pro
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.55G>C
  hgvsp: ENSP00000313098.4:p.Ala19Pro
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.55G>C
  hgvsp: ENSP00000452191.1:p.Ala19Pro
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35408
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala19Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

14-77920393-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920393
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920393
    reference: chr 14
allele count: 2
allele frequency: 1.647880825258717e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.131A>G
  hgvsp: ENSP00000451857.1:p.Lys44Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.53A>G
  hgvsp: ENSP00000339122.2:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.53A>G
  hgvsp: ENSP00000313098.4:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.53A>G
  hgvsp: ENSP00000452176.1:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.53A>G
  hgvsp: ENSP00000404815.2:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.53A>G
  hgvsp: ENSP00000452191.1:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.53A>G
  hgvsp: ENSP00000452181.1:p.Lys18Arg
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys18Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-77920394-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920394
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920394
    reference: chr 14
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.52A>G
  hgvsp: ENSP00000452176.1:p.Lys18Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.52A>G
  hgvsp: ENSP00000313098.4:p.Lys18Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.52A>G
  hgvsp: ENSP00000339122.2:p.Lys18Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.52A>G
  hgvsp: ENSP00000452191.1:p.Lys18Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.52A>G
  hgvsp: ENSP00000404815.2:p.Lys18Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.52A>G
  hgvsp: ENSP00000452181.1:p.Lys18Glu
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.130A>G
  hgvsp: ENSP00000451857.1:p.Lys44Glu
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35408
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6791
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys18Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

14-77920406-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920406
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920406
    reference: chr 14
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.40A>C
  hgvsp: ENSP00000339122.2:p.Ser14Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.40A>C
  hgvsp: ENSP00000452181.1:p.Ser14Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.118A>C
  hgvsp: ENSP00000451857.1:p.Ser40Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.40A>C
  hgvsp: ENSP00000452176.1:p.Ser14Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.40A>C
  hgvsp: ENSP00000452191.1:p.Ser14Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.40A>C
  hgvsp: ENSP00000404815.2:p.Ser14Arg
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.40A>C
  hgvsp: ENSP00000313098.4:p.Ser14Arg
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10900
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1936
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser14Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

14-77920413-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920413
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920413
    reference: chr 14
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.111T>C
  hgvsp: ENST00000556412.1:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.33T>C
  hgvsp: ENST00000327028.4:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.33T>C
  hgvsp: ENST00000448935.2:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.33T>C
  hgvsp: ENST00000557466.1:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.33T>C
  hgvsp: ENST00000343765.2:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.33T>C
  hgvsp: ENST00000553888.1:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.33T>C
  hgvsp: ENST00000557658.1:c.33T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6788
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr11Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

14-77920431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920431
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920431
    reference: chr 14
allele count: 2
allele frequency: 1.648288252649623e-5
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.93G>A
  hgvsp: ENST00000556412.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.15G>A
  hgvsp: ENST00000557466.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.15G>A
  hgvsp: ENST00000557658.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.15G>A
  hgvsp: ENST00000343765.2:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.15G>A
  hgvsp: ENST00000448935.2:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.15G>A
  hgvsp: ENST00000327028.4:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.15G>A
  hgvsp: ENST00000553888.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18327
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6768
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys5Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD

14-77920435-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920435
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920435
    reference: chr 14
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.11C>A
  hgvsp: ENSP00000313098.4:p.Thr4Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.11C>A
  hgvsp: ENSP00000339122.2:p.Thr4Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.89C>A
  hgvsp: ENSP00000451857.1:p.Thr30Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.11C>A
  hgvsp: ENSP00000404815.2:p.Thr4Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.11C>A
  hgvsp: ENSP00000452191.1:p.Thr4Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.11C>A
  hgvsp: ENSP00000452181.1:p.Thr4Lys
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.11C>A
  hgvsp: ENSP00000452176.1:p.Thr4Lys
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr4Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

14-77920439-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920439
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920439
    reference: chr 14
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.7C>T
  hgvsp: ENSP00000452176.1:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.7C>T
  hgvsp: ENSP00000452181.1:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.7C>T
  hgvsp: ENSP00000313098.4:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.7C>T
  hgvsp: ENSP00000339122.2:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.7C>T
  hgvsp: ENSP00000404815.2:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.85C>T
  hgvsp: ENSP00000451857.1:p.Arg29Trp
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.7C>T
  hgvsp: ENSP00000452191.1:p.Arg3Trp
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg3Trp
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

14-77920463-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920463
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920463
    reference: chr 14
allele count: 2
allele frequency: 1.658952537367906e-5
allele num: 120558
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.1-18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.1-18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.1-18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.1-18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.79-18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.1-18G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.1-18G>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

14-77920472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920472
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920472
    reference: chr 14
allele count: 3
allele frequency: 2.496546444085682e-5
allele num: 120166
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.1-27G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.79-27G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.1-27G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.1-27G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.1-27G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.1-27G>A
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.1-27G>A
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16841
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

14-77920483-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77920483
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77920483
    reference: chr 14
allele count: 1
allele frequency: 8.365260745177427e-6
allele num: 119542
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.1-38C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.1-38C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.1-38C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.1-38C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.79-38C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.1-38C>T
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.1-38C>T
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9160
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4897
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

14-77923629-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 77923629
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 77923629
    reference: chr 14
allele count: 5
allele frequency: 4.669406051550243e-4
allele num: 10708
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452181
  ensembl transcript: ENST00000553888
  gene symbol: VIPAS39
  hgvsc: ENST00000553888.1:c.-192A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452176
  ensembl transcript: ENST00000557466
  gene symbol: VIPAS39
  hgvsc: ENST00000557466.1:c.-192A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000404815
  ensembl transcript: ENST00000448935
  gene symbol: VIPAS39
  hgvsc: ENST00000448935.2:c.-1+209A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151445
  ensembl transcript: ENST00000556909
  gene symbol: VIPAS39
  hgvsc: ENST00000556909.1:n.534A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000313098
  ensembl transcript: ENST00000327028
  gene symbol: VIPAS39
  hgvsc: ENST00000327028.4:c.-192A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000451857
  ensembl transcript: ENST00000556412
  gene symbol: VIPAS39
  hgvsc: ENST00000556412.1:c.78+32A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000339122
  ensembl transcript: ENST00000343765
  gene symbol: VIPAS39
  hgvsc: ENST00000343765.2:c.-192A>G
  variant of: http://identifiers.org/hgnc/20347
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151445
  ensembl protein: ENSP00000452191
  ensembl transcript: ENST00000557658
  gene symbol: VIPAS39
  hgvsc: ENST00000557658.1:c.-1+209A>G
  variant of: http://identifiers.org/hgnc/20347
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 4
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56132
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 712
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.468e0

QD
type: SiteQuality
SIO_000300: 1.523e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.34e-1

DP
type: SiteQuality
SIO_000300: 5.727152e6

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.72688e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.61e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.439e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 5.72688e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.61e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.363e1

FS
type: SiteQuality
SIO_000300: 4.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

DP
type: SiteQuality
SIO_000300: 5.72624e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.85e-1

DP
type: SiteQuality
SIO_000300: 5.726203e6

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

FS
type: SiteQuality
SIO_000300: 9.23e-1

QD
type: SiteQuality
SIO_000300: 1.598e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 459
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variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.268e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.67e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 7.116e0

DP
type: SiteQuality
SIO_000300: 5.726074e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.191e1

QD
type: SiteQuality
SIO_000300: 1.687e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 38

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.645169024214817e-4
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.071666162685213e-4
allele num: 6614
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.726634e6

QD
type: SiteQuality
SIO_000300: 1.538e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.816e0

VQSLOD
type: SiteQuality
SIO_000300: 5.57e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.993766482857828e-5
allele num: 66736
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

QD
type: SiteQuality
SIO_000300: 1.499e1

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.721926e6

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.74e-1

MQRankSum
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MQ
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
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QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.265e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

MQRankSum
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SIO_000300: 8.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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SIO_000300: 1.374e1

BaseQRankSum
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SIO_000300: -8.327e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

DP
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VQSLOD
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InbreedingCoeff
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QD
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FS
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MQ
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SIO_000300: 5.961e1

ClippingRankSum
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ReadPosRankSum
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SIO_000300: 6.71e-1

BaseQRankSum
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SIO_000300: -6.768e0

MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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ClippingRankSum
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MQ
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MQRankSum
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

South Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele num: 11578
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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Other
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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FS
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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FS
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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VQSLOD
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InbreedingCoeff
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MQ
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FS
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QD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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Latino
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South Asian
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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ClippingRankSum
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FS
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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Latino
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Other
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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Other
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European (Finnish)
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East Asian
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African
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European (Non-Finnish)
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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African
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European (Finnish)
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South Asian
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InbreedingCoeff
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BaseQRankSum
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FS
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MQ
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QD
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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QD
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DP
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Finnish)
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East Asian
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FS
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MQ
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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BaseQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

ClippingRankSum
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SIO_000300: -1.419e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 1.31e0

ClippingRankSum
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ReadPosRankSum
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QD
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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FS
type: SiteQuality
SIO_000300: 5.29e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.976e1

BaseQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 1.134e0

DP
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SIO_000300: 5.715184e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

ReadPosRankSum
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SIO_000300: -1.142e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 5.715103e6

FS
type: SiteQuality
SIO_000300: 1.763e0

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.96e-1

QD
type: SiteQuality
SIO_000300: 1.458e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
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SIO_000300: -4.34e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.714908e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 169

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 125
allele frequency: 1.872995894392999e-3
allele num: 66738
num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 1.20918984280532e-3
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 1.635174418604651e-3
allele num: 16512
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QD
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
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allele num: 8654
num of homozygotes: 0

Other
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MQRankSum
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SIO_000300: -2.7e-1

FS
type: SiteQuality
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DP
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
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East Asian
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Latino
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European (Finnish)
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South Asian
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African
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QD
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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African
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South Asian
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66736
num of homozygotes: 0

Latino
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South Asian
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allele frequency: 6.056201550387597e-5
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European (Finnish)
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African
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Other
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East Asian
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InbreedingCoeff
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ClippingRankSum
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e0

MQRankSum
type: SiteQuality
SIO_000300: -1.407e0

DP
type: SiteQuality
SIO_000300: 5.705278e6

VQSLOD
type: SiteQuality
SIO_000300: -3.201e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56116
bin: 9.75e1
variant carriers: 37

GenotypeQuality
all individuals: 363
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 33
allele frequency: 1.998546511627907e-3
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

DP
type: SiteQuality
SIO_000300: 5.708645e6

QD
type: SiteQuality
SIO_000300: 1.4e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56113
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 5.704103e6

MQRankSum
type: SiteQuality
SIO_000300: -5.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.469e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.242e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 56112
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1772
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

FS
type: SiteQuality
SIO_000300: 4.771e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.703827e6

QD
type: SiteQuality
SIO_000300: 1.142e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.79834552211965e-4
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.83e0

DP
type: SiteQuality
SIO_000300: 5.702634e6

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.515e1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 345
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.19e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.159e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.824e1

DP
type: SiteQuality
SIO_000300: 5.699086e6

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.053e1

QD
type: SiteQuality
SIO_000300: 1.93e1

FS
type: SiteQuality
SIO_000300: 3.068e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

DP
type: SiteQuality
SIO_000300: 5.699051e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.801e0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56107
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

QD
type: SiteQuality
SIO_000300: 1.687e1

VQSLOD
type: SiteQuality
SIO_000300: -1.438e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 5.698722e6

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56105
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.424e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

FS
type: SiteQuality
SIO_000300: 2.115e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

DP
type: SiteQuality
SIO_000300: 5.695803e6

GenotypeQuality
all individuals: 411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56294
bin: 9.75e1
variant carriers: 1097

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1084
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 1

Latino
type: Population
allele count: 50
allele frequency: 4.320774282751469e-3
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.49907057624273e-4
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1107
allele frequency: 1.064423076923077e-1
allele num: 10400
num of homozygotes: 70

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.429999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

DP
type: SiteQuality
SIO_000300: 5.68974e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.384e0

QD
type: SiteQuality
SIO_000300: 1.494e1

GenotypeQuality
all individuals: 327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.681507e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.867e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.173e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 7.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

DP
type: SiteQuality
SIO_000300: 2.111239e6

QD
type: SiteQuality
SIO_000300: 1.744e1

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.126308104161596e-5
allele num: 65744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

DP
type: SiteQuality
SIO_000300: 2.111239e6

FS
type: SiteQuality
SIO_000300: 7.86e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.744e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 373
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.10995718320124e-5
allele num: 65862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.354e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

QD
type: SiteQuality
SIO_000300: 1.868e1

DP
type: SiteQuality
SIO_000300: 2.114332e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10900
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520034048762692e-5
allele num: 65788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.771e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 3.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.292e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 2.122493e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1935
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GenotypeQuality
all individuals: 584
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510482750286992e-5
allele num: 66204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.89e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 5.061e0

QD
type: SiteQuality
SIO_000300: 1.506e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.022e0

MQRankSum
type: SiteQuality
SIO_000300: -8.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 2.173337e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508705229172324e-5
allele num: 66282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8476
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South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.47e-1

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.066e0

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1913
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.508295625942685e-5
allele num: 66300
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
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allele num: 66678
num of homozygotes: 0

Other
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.496926260233305e-5
allele num: 66694
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South Asian
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allele frequency: 6.062075654704171e-5
allele num: 16496
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
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African
type: Population
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allele num: 10402
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East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
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MQ
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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FS
type: SiteQuality
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MQRankSum
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SIO_000300: 1.52e0

QD
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-2

ClippingRankSum
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SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
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SIO_000300: 4.0e-4

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQRankSum
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BaseQRankSum
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SIO_000300: 1.18e-1

FS
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ClippingRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.19e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.95e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.175e0

DP
type: SiteQuality
SIO_000300: 2.205355e6

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ReadPosRankSum
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SIO_000300: -4.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 2.734e0

DP
type: SiteQuality
SIO_000300: 2.205486e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.284e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.73e-1

DP
type: SiteQuality
SIO_000300: 2.205436e6

VQSLOD
type: SiteQuality
SIO_000300: -7.61e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.479e1

VQSLOD
type: SiteQuality
SIO_000300: 3.93e-1

FS
type: SiteQuality
SIO_000300: 1.706e0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.06e-1

DP
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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DP
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QD
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
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European (Finnish)
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allele frequency: 3.02571860816944e-4
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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Other
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BaseQRankSum
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MQ
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QD
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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South Asian
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Latino
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African
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.091e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.204293e6

VQSLOD
type: SiteQuality
SIO_000300: -2.598e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.057e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.87e-1

QD
type: SiteQuality
SIO_000300: 1.713e1

GenotypeQuality
all individuals: 2340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10897
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 419
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66336
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.744896178677369e-4
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.552e0

MQ
type: SiteQuality
SIO_000300: 3.987e1

MQRankSum
type: SiteQuality
SIO_000300: -6.39e-1

FS
type: SiteQuality
SIO_000300: 1.619e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.189e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.906e0

QD
type: SiteQuality
SIO_000300: 1.003e1

DP
type: SiteQuality
SIO_000300: 2.175554e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1888
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10894
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 424
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5929
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.536518977771057e-5
allele num: 66130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.294e0

FS
type: SiteQuality
SIO_000300: 1.976e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.49e-1

DP
type: SiteQuality
SIO_000300: 2.132603e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.136e1

MQRankSum
type: SiteQuality
SIO_000300: 4.79e-1

GenotypeQuality
all individuals: 1391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10887
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3820
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19882
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.145526057030482e-5
allele num: 16272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.314e1

DP
type: SiteQuality
SIO_000300: 2.056405e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.355e0