14-51211099-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51211099
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51211099
    reference: chr 14
allele count: 2
allele frequency: 1.650137786505173e-5
allele num: 121202
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3536-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5065-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5065-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5065-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5065-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2926-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2926-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5065-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3536-16T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5065-16T>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7396
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

14-51211102-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51211102
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51211102
    reference: chr 14
allele count: 2
allele frequency: 1.650410126916539e-5
allele num: 121182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3536-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5065-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5065-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5065-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5065-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5065-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2926-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3536-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5065-19A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2926-19A>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7395
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

14-51211104-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51211104
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51211104
    reference: chr 14
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5065-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2926-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5065-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5065-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3536-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2926-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3536-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5065-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5065-21T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5065-21T>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7395
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

14-51214661-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214661
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214661
    reference: chr 14
allele count: 2
allele frequency: 1.671458180116333e-5
allele num: 119656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+49G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+49G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20548
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

14-51214664-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214664
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214664
    reference: chr 14
allele count: 1
allele frequency: 8.347245409015026e-6
allele num: 119800
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+46C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+46C>T
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20935
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-51214668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214668
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214668
    reference: chr 14
allele count: 4
allele frequency: 3.336224728097685e-5
allele num: 119896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+42G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+42G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19611
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/14-51214669-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214669
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214669
    reference: chr 14
allele count: 2
allele frequency: 1.666250104140632e-5
allele num: 120030
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+41T>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+41T>G
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20126
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-51214673-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214673
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214673
    reference: chr 14
allele count: 7
allele frequency: 5.830126763613346e-5
allele num: 120066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+37A>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+37A>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21353
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/14-51214683-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214683
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214682
    reference: chr 14
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+26delG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+26delG
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: AC
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/14-51214683-ACCCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214683
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214679
    reference: chr 14
allele count: 6
allele frequency: 4.981733643307871e-5
allele num: 120440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+23_5064+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+23_2925+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+23_5064+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+23_2925+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+23_3535+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+23_5064+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+23_3535+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+23_5064+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+23_5064+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+23_5064+26delGGGG
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: ACCCC
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/14-51214684-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214684
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214684
    reference: chr 14
allele count: 329
allele frequency: 2.73178670475115e-3
allele num: 120434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+26G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+26G>T
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22853
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22963
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

14-51214684-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214684
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214684
    reference: chr 14
allele count: 1
allele frequency: 8.303303053954863e-6
allele num: 120434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+26G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+26G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

14-51214686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214686
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214686
    reference: chr 14
allele count: 23
allele frequency: 1.907194268466616e-4
allele num: 120596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+24G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23406
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

14-51214687-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214687
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214687
    reference: chr 14
allele count: 3
allele frequency: 2.486325211337643e-5
allele num: 120660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+23G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+23G>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23519
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

14-51214688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214688
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214688
    reference: chr 14
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+22G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+22G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-51214699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214699
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214699
    reference: chr 14
allele count: 10
allele frequency: 8.258320257659592e-5
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+11G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+11G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/14-51214704-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214704
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214704
    reference: chr 14
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+6G>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+6G>T
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.25e1
  variant carriers: 0
hgvs: c.5064+6G>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

14-51214704-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214704
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214704
    reference: chr 14
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3535+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5064+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2925+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5064+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5064+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5064+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3535+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5064+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2925+6G>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5064+6G>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: c.5064+6G>C
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

14-51214712-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214712
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214712
    reference: chr 14
allele count: 2
allele frequency: 1.649457328538911e-5
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5062C>A
  hgvsp: ENSP00000432924.1:p.Gln1688Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5062C>A
  hgvsp: ENSP00000245441.5:p.Gln1688Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5062C>A
  hgvsp: ENSP00000324210.9:p.Gln1688Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2923C>A
  hgvsp: ENSP00000371474.4:p.Gln975Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5062C>A
  hgvsp: ENSP00000436092.2:p.Gln1688Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5062C>A
  hgvsp: ENSP00000371472.3:p.Gln1688Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3533C>A
  hgvsp: ENSP00000374519.3:p.Gln1179Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2923C>A
  hgvsp: ENSP00000374518.3:p.Gln975Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5062C>A
  hgvsp: ENSP00000412391.1:p.Gln1688Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3533C>A
  hgvsp: ENSP00000433717.1:p.Gln1179Lys
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln1688Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum

14-51214720-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214720
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214720
    reference: chr 14
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3525A>G
  hgvsp: ENSP00000433717.1:p.Lys1176Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5054A>G
  hgvsp: ENSP00000432924.1:p.Lys1685Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5054A>G
  hgvsp: ENSP00000412391.1:p.Lys1685Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2915A>G
  hgvsp: ENSP00000374518.3:p.Lys972Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5054A>G
  hgvsp: ENSP00000371472.3:p.Lys1685Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5054A>G
  hgvsp: ENSP00000436092.2:p.Lys1685Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3525A>G
  hgvsp: ENSP00000374519.3:p.Lys1176Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5054A>G
  hgvsp: ENSP00000324210.9:p.Lys1685Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5054A>G
  hgvsp: ENSP00000245441.5:p.Lys1685Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2915A>G
  hgvsp: ENSP00000371474.4:p.Lys972Arg
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys1685Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

14-51214735-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214735
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214735
    reference: chr 14
allele count: 2
allele frequency: 1.64836976230508e-5
allele num: 121332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5039A>C
  hgvsp: ENSP00000412391.1:p.Lys1680Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5039A>C
  hgvsp: ENSP00000432924.1:p.Lys1680Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2900A>C
  hgvsp: ENSP00000371474.4:p.Lys967Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5039A>C
  hgvsp: ENSP00000436092.2:p.Lys1680Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5039A>C
  hgvsp: ENSP00000371472.3:p.Lys1680Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5039A>C
  hgvsp: ENSP00000324210.9:p.Lys1680Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3510A>C
  hgvsp: ENSP00000433717.1:p.Lys1171Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5039A>C
  hgvsp: ENSP00000245441.5:p.Lys1680Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3510A>C
  hgvsp: ENSP00000374519.3:p.Lys1171Thr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2900A>C
  hgvsp: ENSP00000374518.3:p.Lys967Thr
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24388
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4089
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Lys1680Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-51214741-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214741
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214740
    reference: chr 14
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5032delC
  hgvsp: ENSP00000432924.1:p.Leu1678PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5032delC
  hgvsp: ENSP00000245441.5:p.Leu1678PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3503delC
  hgvsp: ENSP00000433717.1:p.Leu1169PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3503delC
  hgvsp: ENSP00000374519.3:p.Leu1169PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2893delC
  hgvsp: ENSP00000371474.4:p.Leu965PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2893delC
  hgvsp: ENSP00000374518.3:p.Leu965PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5032delC
  hgvsp: ENSP00000436092.2:p.Leu1678PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5032delC
  hgvsp: ENSP00000371472.3:p.Leu1678PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5032delC
  hgvsp: ENSP00000324210.9:p.Leu1678PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5032delC
  hgvsp: ENSP00000412391.1:p.Leu1678PhefsTer9
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1678PhefsTer9
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: AG
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

14-51214745-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214745
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214745
    reference: chr 14
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3500C>A
  hgvsp: ENSP00000433717.1:p.His1168Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3500C>A
  hgvsp: ENSP00000374519.3:p.His1168Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5029C>A
  hgvsp: ENSP00000436092.2:p.His1677Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5029C>A
  hgvsp: ENSP00000324210.9:p.His1677Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5029C>A
  hgvsp: ENSP00000371472.3:p.His1677Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2890C>A
  hgvsp: ENSP00000371474.4:p.His964Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5029C>A
  hgvsp: ENSP00000245441.5:p.His1677Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5029C>A
  hgvsp: ENSP00000432924.1:p.His1677Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2890C>A
  hgvsp: ENSP00000374518.3:p.His964Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5029C>A
  hgvsp: ENSP00000412391.1:p.His1677Asn
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45838
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His1677Asn
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

14-51214754-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214754
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214754
    reference: chr 14
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2881C>A
  hgvsp: ENSP00000374518.3:p.Gln961Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5020C>A
  hgvsp: ENSP00000432924.1:p.Gln1674Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5020C>A
  hgvsp: ENSP00000412391.1:p.Gln1674Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3491C>A
  hgvsp: ENSP00000374519.3:p.Gln1165Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2881C>A
  hgvsp: ENSP00000371474.4:p.Gln961Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5020C>A
  hgvsp: ENSP00000245441.5:p.Gln1674Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5020C>A
  hgvsp: ENSP00000436092.2:p.Gln1674Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5020C>A
  hgvsp: ENSP00000371472.3:p.Gln1674Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3491C>A
  hgvsp: ENSP00000433717.1:p.Gln1165Lys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5020C>A
  hgvsp: ENSP00000324210.9:p.Gln1674Lys
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln1674Lys
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-51214763-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214763
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214763
    reference: chr 14
allele count: 317
allele frequency: 2.61206328279499e-3
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3482A>G
  hgvsp: ENSP00000433717.1:p.Ile1162Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5011A>G
  hgvsp: ENSP00000371472.3:p.Ile1671Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5011A>G
  hgvsp: ENSP00000324210.9:p.Ile1671Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2872A>G
  hgvsp: ENSP00000374518.3:p.Ile958Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2872A>G
  hgvsp: ENSP00000371474.4:p.Ile958Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5011A>G
  hgvsp: ENSP00000436092.2:p.Ile1671Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5011A>G
  hgvsp: ENSP00000412391.1:p.Ile1671Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5011A>G
  hgvsp: ENSP00000245441.5:p.Ile1671Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5011A>G
  hgvsp: ENSP00000432924.1:p.Ile1671Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3482A>G
  hgvsp: ENSP00000374519.3:p.Ile1162Val
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24334
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 9.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile1671Val
num of homozygotes: 5
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

14-51214765-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214765
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214765
    reference: chr 14
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5009A>C
  hgvsp: ENSP00000436092.2:p.His1670Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3480A>C
  hgvsp: ENSP00000374519.3:p.His1161Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3480A>C
  hgvsp: ENSP00000433717.1:p.His1161Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2870A>C
  hgvsp: ENSP00000371474.4:p.His957Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5009A>C
  hgvsp: ENSP00000371472.3:p.His1670Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5009A>C
  hgvsp: ENSP00000412391.1:p.His1670Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2870A>C
  hgvsp: ENSP00000374518.3:p.His957Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5009A>C
  hgvsp: ENSP00000432924.1:p.His1670Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5009A>C
  hgvsp: ENSP00000245441.5:p.His1670Pro
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5009A>C
  hgvsp: ENSP00000324210.9:p.His1670Pro
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His1670Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

14-51214768-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214768
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214768
    reference: chr 14
allele count: 40
allele frequency: 3.295924589245398e-4
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.5006C>A
  hgvsp: ENSP00000432924.1:p.Thr1669Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2867C>A
  hgvsp: ENSP00000374518.3:p.Thr956Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.5006C>A
  hgvsp: ENSP00000245441.5:p.Thr1669Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.5006C>A
  hgvsp: ENSP00000371472.3:p.Thr1669Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.5006C>A
  hgvsp: ENSP00000436092.2:p.Thr1669Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2867C>A
  hgvsp: ENSP00000371474.4:p.Thr956Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.5006C>A
  hgvsp: ENSP00000412391.1:p.Thr1669Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3477C>A
  hgvsp: ENSP00000374519.3:p.Thr1160Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3477C>A
  hgvsp: ENSP00000433717.1:p.Thr1160Asn
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.5006C>A
  hgvsp: ENSP00000324210.9:p.Thr1669Asn
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24462
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr1669Asn
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

14-51214794-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214794
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214794
    reference: chr 14
allele count: 11
allele frequency: 9.067677850136015e-5
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4980G>A
  hgvsp: ENST00000245441.5:c.4980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4980G>A
  hgvsp: ENST00000476352.1:c.4980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4980G>A
  hgvsp: ENST00000382041.3:c.4980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4980G>A
  hgvsp: ENST00000453196.1:c.4980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3451G>A
  hgvsp: ENST00000530853.1:c.3451G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4980G>A
  hgvsp: ENST00000324330.9:c.4980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4980G>A
  hgvsp: ENST00000530997.2:c.4980G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2841G>A
  hgvsp: ENST00000382043.4:c.2841G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2841G>A
  hgvsp: ENST00000389868.3:c.2841G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3451G>A
  hgvsp: ENST00000389869.3:c.3451G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala1660Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

14-51214799-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214799
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214799
    reference: chr 14
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4975G>C
  hgvsp: ENSP00000245441.5:p.Glu1659Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4975G>C
  hgvsp: ENSP00000436092.2:p.Glu1659Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2836G>C
  hgvsp: ENSP00000374518.3:p.Glu946Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4975G>C
  hgvsp: ENSP00000371472.3:p.Glu1659Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3446G>C
  hgvsp: ENSP00000374519.3:p.Glu1150Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4975G>C
  hgvsp: ENSP00000412391.1:p.Glu1659Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2836G>C
  hgvsp: ENSP00000371474.4:p.Glu946Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4975G>C
  hgvsp: ENSP00000324210.9:p.Glu1659Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4975G>C
  hgvsp: ENSP00000432924.1:p.Glu1659Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3446G>C
  hgvsp: ENSP00000433717.1:p.Glu1150Gln
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu1659Gln
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-51214806-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214806
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214806
    reference: chr 14
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3439T>G
  hgvsp: ENST00000389869.3:c.3439T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2829T>G
  hgvsp: ENST00000389868.3:c.2829T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4968T>G
  hgvsp: ENST00000453196.1:c.4968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4968T>G
  hgvsp: ENST00000530997.2:c.4968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4968T>G
  hgvsp: ENST00000324330.9:c.4968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2829T>G
  hgvsp: ENST00000382043.4:c.2829T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4968T>G
  hgvsp: ENST00000476352.1:c.4968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3439T>G
  hgvsp: ENST00000530853.1:c.3439T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4968T>G
  hgvsp: ENST00000245441.5:c.4968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4968T>G
  hgvsp: ENST00000382041.3:c.4968T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser1656Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-51214811-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214811
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214811
    reference: chr 14
allele count: 1
allele frequency: 8.263370132874991e-6
allele num: 121016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4963G>A
  hgvsp: ENSP00000245441.5:p.Val1655Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4963G>A
  hgvsp: ENSP00000436092.2:p.Val1655Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3434G>A
  hgvsp: ENSP00000433717.1:p.Val1146Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4963G>A
  hgvsp: ENSP00000324210.9:p.Val1655Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2824G>A
  hgvsp: ENSP00000371474.4:p.Val942Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4963G>A
  hgvsp: ENSP00000412391.1:p.Val1655Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4963G>A
  hgvsp: ENSP00000432924.1:p.Val1655Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3434G>A
  hgvsp: ENSP00000374519.3:p.Val1146Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4963G>A
  hgvsp: ENSP00000371472.3:p.Val1655Met
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2824G>A
  hgvsp: ENSP00000374518.3:p.Val942Met
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val1655Met
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

14-51214813-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214813
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214813
    reference: chr 14
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4961T>C
  hgvsp: ENSP00000324210.9:p.Leu1654Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3432T>C
  hgvsp: ENSP00000374519.3:p.Leu1145Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4961T>C
  hgvsp: ENSP00000245441.5:p.Leu1654Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2822T>C
  hgvsp: ENSP00000371474.4:p.Leu941Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4961T>C
  hgvsp: ENSP00000432924.1:p.Leu1654Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2822T>C
  hgvsp: ENSP00000374518.3:p.Leu941Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4961T>C
  hgvsp: ENSP00000412391.1:p.Leu1654Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4961T>C
  hgvsp: ENSP00000436092.2:p.Leu1654Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4961T>C
  hgvsp: ENSP00000371472.3:p.Leu1654Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3432T>C
  hgvsp: ENSP00000433717.1:p.Leu1145Ser
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3993
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu1654Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

14-51214821-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214821
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214821
    reference: chr 14
allele count: 2
allele frequency: 1.666500016665e-5
allele num: 120012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4953C>T
  hgvsp: ENST00000476352.1:c.4953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3424C>T
  hgvsp: ENST00000389869.3:c.3424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4953C>T
  hgvsp: ENST00000324330.9:c.4953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2814C>T
  hgvsp: ENST00000389868.3:c.2814C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4953C>T
  hgvsp: ENST00000530997.2:c.4953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4953C>T
  hgvsp: ENST00000382041.3:c.4953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2814C>T
  hgvsp: ENST00000382043.4:c.2814C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3424C>T
  hgvsp: ENST00000530853.1:c.3424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4953C>T
  hgvsp: ENST00000245441.5:c.4953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4953C>T
  hgvsp: ENST00000453196.1:c.4953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.4953C>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

14-51214836-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214836
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214836
    reference: chr 14
allele count: 188
allele frequency: 1.603165398915305e-3
allele num: 117268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-13A>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-13A>T
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 22721
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18320
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 38877
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5682
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 3
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-51214836-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214836
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214836
    reference: chr 14
allele count: 2
allele frequency: 1.705495105229048e-5
allele num: 117268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-13A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-13A>G
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-51214837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214837
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214837
    reference: chr 14
allele count: 1
allele frequency: 8.550662676357418e-6
allele num: 116950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-14C>T
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-14C>T
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17839
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP

14-51214839-AAAAGTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214839
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214833
    reference: chr 14
allele count: 1
allele frequency: 8.580892069539549e-6
allele num: 116538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-22_4951-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-22_3422-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-22_4951-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-22_4951-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-22_4951-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-22_4951-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-22_2812-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-22_3422-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-22_2812-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-22_4951-17delGACTTT
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22046
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5876
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: AAAAGTC
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

14-51214844-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214844
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214844
    reference: chr 14
allele count: 1
allele frequency: 8.673779165582445e-6
allele num: 115290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-21A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-21A>G
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4772
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3970
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

14-51214849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214849
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214849
    reference: chr 14
allele count: 8
allele frequency: 7.008445176437607e-5
allele num: 114148
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-26A>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-26A>G
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12020
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17189
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

14-51214854-G-GACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214854
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214857
    reference: chr 14
allele count: 1
allele frequency: 8.818342151675484e-6
allele num: 113400
alternate allele: GACA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-34_2812-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-34_4951-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-34_4951-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-34_4951-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-34_4951-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-34_4951-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-34_4951-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-34_3422-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-34_2812-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-34_3422-32dupTGT
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

14-51214857-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51214857
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51214857
    reference: chr 14
allele count: 257
allele frequency: 2.285053792122344e-3
allele num: 112470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4951-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4951-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3422-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3422-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4951-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2812-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4951-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4951-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2812-34T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4951-34T>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12163
  bin: 2.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 2.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 3.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 15136
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3975
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 4
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

14-51219186-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219186
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219186
    reference: chr 14
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421+50T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811+50T>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4904
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-51219203-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219203
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219203
    reference: chr 14
allele count: 1
allele frequency: 8.251233559417133e-6
allele num: 121194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950+33G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811+33G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14315
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

14-51219205-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219205
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219205
    reference: chr 14
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421+31T>C
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811+31T>C
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

14-51219211-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219211
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219211
    reference: chr 14
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950+25C>G
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950+25C>G
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14419
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

14-51219212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219212
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219212
    reference: chr 14
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950+24G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950+24G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39812
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

14-51219230-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219230
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219230
    reference: chr 14
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950+6G>A
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950+6G>A
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12175
  bin: 6.75e1
  variant carriers: 0
hgvs: c.4950+6G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

14-51219236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219236
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219236
    reference: chr 14
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2811G>A
  hgvsp: ENST00000389868.3:c.2811G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4950G>A
  hgvsp: ENST00000245441.5:c.4950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4950G>A
  hgvsp: ENST00000530997.2:c.4950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2811G>A
  hgvsp: ENST00000382043.4:c.2811G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4950G>A
  hgvsp: ENST00000453196.1:c.4950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4950G>A
  hgvsp: ENST00000476352.1:c.4950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3421G>A
  hgvsp: ENST00000530853.1:c.3421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3421G>A
  hgvsp: ENST00000389869.3:c.3421G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4950G>A
  hgvsp: ENST00000324330.9:c.4950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4950G>A
  hgvsp: ENST00000382041.3:c.4950G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.4950G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

14-51219249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219249
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219249
    reference: chr 14
allele count: 236
allele frequency: 1.944050874822894e-3
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4937G>A
  hgvsp: ENSP00000245441.5:p.Arg1646His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4937G>A
  hgvsp: ENSP00000432924.1:p.Arg1646His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2798G>A
  hgvsp: ENSP00000374518.3:p.Arg933His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3408G>A
  hgvsp: ENSP00000374519.3:p.Arg1137His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2798G>A
  hgvsp: ENSP00000371474.4:p.Arg933His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4937G>A
  hgvsp: ENSP00000436092.2:p.Arg1646His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4937G>A
  hgvsp: ENSP00000324210.9:p.Arg1646His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4937G>A
  hgvsp: ENSP00000412391.1:p.Arg1646His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4937G>A
  hgvsp: ENSP00000371472.3:p.Arg1646His
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3408G>A
  hgvsp: ENSP00000433717.1:p.Arg1137His
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 9.75e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1646His
num of homozygotes: 4
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

14-51219250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219250
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219250
    reference: chr 14
allele count: 4
allele frequency: 3.294947198471145e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4936C>T
  hgvsp: ENSP00000432924.1:p.Arg1646Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2797C>T
  hgvsp: ENSP00000374518.3:p.Arg933Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3407C>T
  hgvsp: ENSP00000433717.1:p.Arg1137Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2797C>T
  hgvsp: ENSP00000371474.4:p.Arg933Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4936C>T
  hgvsp: ENSP00000436092.2:p.Arg1646Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4936C>T
  hgvsp: ENSP00000412391.1:p.Arg1646Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4936C>T
  hgvsp: ENSP00000324210.9:p.Arg1646Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4936C>T
  hgvsp: ENSP00000371472.3:p.Arg1646Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4936C>T
  hgvsp: ENSP00000245441.5:p.Arg1646Cys
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3407C>T
  hgvsp: ENSP00000374519.3:p.Arg1137Cys
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg1646Cys
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

14-51219250-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219250
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219250
    reference: chr 14
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4936C>A
  hgvsp: ENSP00000436092.2:p.Arg1646Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4936C>A
  hgvsp: ENSP00000432924.1:p.Arg1646Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2797C>A
  hgvsp: ENSP00000374518.3:p.Arg933Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4936C>A
  hgvsp: ENSP00000371472.3:p.Arg1646Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4936C>A
  hgvsp: ENSP00000324210.9:p.Arg1646Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2797C>A
  hgvsp: ENSP00000371474.4:p.Arg933Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3407C>A
  hgvsp: ENSP00000433717.1:p.Arg1137Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4936C>A
  hgvsp: ENSP00000245441.5:p.Arg1646Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4936C>A
  hgvsp: ENSP00000412391.1:p.Arg1646Ser
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3407C>A
  hgvsp: ENSP00000374519.3:p.Arg1137Ser
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg1646Ser
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

14-51219252-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219252
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219252
    reference: chr 14
allele count: 7
allele frequency: 5.766157597324503e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4934A>G
  hgvsp: ENSP00000432924.1:p.Glu1645Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4934A>G
  hgvsp: ENSP00000412391.1:p.Glu1645Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4934A>G
  hgvsp: ENSP00000324210.9:p.Glu1645Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4934A>G
  hgvsp: ENSP00000245441.5:p.Glu1645Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4934A>G
  hgvsp: ENSP00000371472.3:p.Glu1645Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4934A>G
  hgvsp: ENSP00000436092.2:p.Glu1645Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2795A>G
  hgvsp: ENSP00000371474.4:p.Glu932Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3405A>G
  hgvsp: ENSP00000374519.3:p.Glu1136Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2795A>G
  hgvsp: ENSP00000374518.3:p.Glu932Gly
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3405A>G
  hgvsp: ENSP00000433717.1:p.Glu1136Gly
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu1645Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

14-51219265-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219265
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219265
    reference: chr 14
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4921A>G
  hgvsp: ENSP00000412391.1:p.Lys1641Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4921A>G
  hgvsp: ENSP00000436092.2:p.Lys1641Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4921A>G
  hgvsp: ENSP00000432924.1:p.Lys1641Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3392A>G
  hgvsp: ENSP00000433717.1:p.Lys1132Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2782A>G
  hgvsp: ENSP00000371474.4:p.Lys928Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4921A>G
  hgvsp: ENSP00000245441.5:p.Lys1641Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2782A>G
  hgvsp: ENSP00000374518.3:p.Lys928Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4921A>G
  hgvsp: ENSP00000324210.9:p.Lys1641Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4921A>G
  hgvsp: ENSP00000371472.3:p.Lys1641Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3392A>G
  hgvsp: ENSP00000374519.3:p.Lys1132Glu
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys1641Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

14-51219266-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219266
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219266
    reference: chr 14
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4920G>A
  hgvsp: ENST00000530997.2:c.4920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2781G>A
  hgvsp: ENST00000389868.3:c.2781G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4920G>A
  hgvsp: ENST00000324330.9:c.4920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4920G>A
  hgvsp: ENST00000245441.5:c.4920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3391G>A
  hgvsp: ENST00000389869.3:c.3391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2781G>A
  hgvsp: ENST00000382043.4:c.2781G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4920G>A
  hgvsp: ENST00000382041.3:c.4920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4920G>A
  hgvsp: ENST00000476352.1:c.4920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4920G>A
  hgvsp: ENST00000453196.1:c.4920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3391G>A
  hgvsp: ENST00000530853.1:c.3391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1640Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-51219268-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219268
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219268
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3389C>G
  hgvsp: ENSP00000374519.3:p.Leu1131Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4918C>G
  hgvsp: ENSP00000436092.2:p.Leu1640Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4918C>G
  hgvsp: ENSP00000371472.3:p.Leu1640Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3389C>G
  hgvsp: ENSP00000433717.1:p.Leu1131Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4918C>G
  hgvsp: ENSP00000432924.1:p.Leu1640Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4918C>G
  hgvsp: ENSP00000245441.5:p.Leu1640Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4918C>G
  hgvsp: ENSP00000324210.9:p.Leu1640Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4918C>G
  hgvsp: ENSP00000412391.1:p.Leu1640Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2779C>G
  hgvsp: ENSP00000371474.4:p.Leu927Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2779C>G
  hgvsp: ENSP00000374518.3:p.Leu927Val
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu1640Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

14-51219269-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219269
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219269
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4917T>C
  hgvsp: ENST00000245441.5:c.4917T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4917T>C
  hgvsp: ENST00000530997.2:c.4917T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4917T>C
  hgvsp: ENST00000382041.3:c.4917T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3388T>C
  hgvsp: ENST00000389869.3:c.3388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4917T>C
  hgvsp: ENST00000476352.1:c.4917T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4917T>C
  hgvsp: ENST00000324330.9:c.4917T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2778T>C
  hgvsp: ENST00000382043.4:c.2778T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2778T>C
  hgvsp: ENST00000389868.3:c.2778T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4917T>C
  hgvsp: ENST00000453196.1:c.4917T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3388T>C
  hgvsp: ENST00000530853.1:c.3388T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn1639Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

14-51219278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219278
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219278
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4908G>A
  hgvsp: ENST00000245441.5:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2769G>A
  hgvsp: ENST00000382043.4:c.2769G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4908G>A
  hgvsp: ENST00000476352.1:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4908G>A
  hgvsp: ENST00000382041.3:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3379G>A
  hgvsp: ENST00000530853.1:c.3379G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4908G>A
  hgvsp: ENST00000530997.2:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4908G>A
  hgvsp: ENST00000453196.1:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4908G>A
  hgvsp: ENST00000324330.9:c.4908G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3379G>A
  hgvsp: ENST00000389869.3:c.3379G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2769G>A
  hgvsp: ENST00000389868.3:c.2769G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu1636Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

14-51219285-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219285
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219285
    reference: chr 14
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2762A>T
  hgvsp: ENSP00000371474.4:p.Glu921Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4901A>T
  hgvsp: ENSP00000436092.2:p.Glu1634Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4901A>T
  hgvsp: ENSP00000412391.1:p.Glu1634Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4901A>T
  hgvsp: ENSP00000432924.1:p.Glu1634Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4901A>T
  hgvsp: ENSP00000245441.5:p.Glu1634Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3372A>T
  hgvsp: ENSP00000374519.3:p.Glu1125Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2762A>T
  hgvsp: ENSP00000374518.3:p.Glu921Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4901A>T
  hgvsp: ENSP00000371472.3:p.Glu1634Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3372A>T
  hgvsp: ENSP00000433717.1:p.Glu1125Val
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4901A>T
  hgvsp: ENSP00000324210.9:p.Glu1634Val
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu1634Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-51219288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219288
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219288
    reference: chr 14
allele count: 5
allele frequency: 4.118616144975288e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4898G>A
  hgvsp: ENSP00000324210.9:p.Arg1633Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4898G>A
  hgvsp: ENSP00000436092.2:p.Arg1633Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4898G>A
  hgvsp: ENSP00000245441.5:p.Arg1633Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3369G>A
  hgvsp: ENSP00000374519.3:p.Arg1124Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4898G>A
  hgvsp: ENSP00000432924.1:p.Arg1633Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2759G>A
  hgvsp: ENSP00000374518.3:p.Arg920Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2759G>A
  hgvsp: ENSP00000371474.4:p.Arg920Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4898G>A
  hgvsp: ENSP00000412391.1:p.Arg1633Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4898G>A
  hgvsp: ENSP00000371472.3:p.Arg1633Gln
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3369G>A
  hgvsp: ENSP00000433717.1:p.Arg1124Gln
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg1633Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

14-51219289-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219289
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219289
    reference: chr 14
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4897C>T
  hgvsp: ENSP00000432924.1:p.Arg1633Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4897C>T
  hgvsp: ENSP00000324210.9:p.Arg1633Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2758C>T
  hgvsp: ENSP00000374518.3:p.Arg920Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3368C>T
  hgvsp: ENSP00000374519.3:p.Arg1124Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4897C>T
  hgvsp: ENSP00000371472.3:p.Arg1633Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4897C>T
  hgvsp: ENSP00000412391.1:p.Arg1633Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4897C>T
  hgvsp: ENSP00000436092.2:p.Arg1633Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3368C>T
  hgvsp: ENSP00000433717.1:p.Arg1124Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2758C>T
  hgvsp: ENSP00000371474.4:p.Arg920Trp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4897C>T
  hgvsp: ENSP00000245441.5:p.Arg1633Trp
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg1633Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

14-51219293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219293
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219293
    reference: chr 14
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4893G>A
  hgvsp: ENST00000453196.1:c.4893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2754G>A
  hgvsp: ENST00000389868.3:c.2754G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4893G>A
  hgvsp: ENST00000324330.9:c.4893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3364G>A
  hgvsp: ENST00000530853.1:c.3364G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4893G>A
  hgvsp: ENST00000245441.5:c.4893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3364G>A
  hgvsp: ENST00000389869.3:c.3364G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4893G>A
  hgvsp: ENST00000530997.2:c.4893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2754G>A
  hgvsp: ENST00000382043.4:c.2754G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4893G>A
  hgvsp: ENST00000476352.1:c.4893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4893G>A
  hgvsp: ENST00000382041.3:c.4893G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu1631Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

14-51219298-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219298
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219298
    reference: chr 14
allele count: 13
allele frequency: 1.070840197693575e-4
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2749T>C
  hgvsp: ENST00000389868.3:c.2749T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4888T>C
  hgvsp: ENST00000324330.9:c.4888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4888T>C
  hgvsp: ENST00000530997.2:c.4888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2749T>C
  hgvsp: ENST00000382043.4:c.2749T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4888T>C
  hgvsp: ENST00000476352.1:c.4888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4888T>C
  hgvsp: ENST00000453196.1:c.4888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4888T>C
  hgvsp: ENST00000382041.3:c.4888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4888T>C
  hgvsp: ENST00000245441.5:c.4888T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3359T>C
  hgvsp: ENST00000530853.1:c.3359T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3359T>C
  hgvsp: ENST00000389869.3:c.3359T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu1630Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

14-51219300-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219300
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219300
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4886C>A
  hgvsp: ENSP00000371472.3:p.Ala1629Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3357C>A
  hgvsp: ENSP00000374519.3:p.Ala1120Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2747C>A
  hgvsp: ENSP00000374518.3:p.Ala916Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4886C>A
  hgvsp: ENSP00000432924.1:p.Ala1629Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4886C>A
  hgvsp: ENSP00000412391.1:p.Ala1629Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3357C>A
  hgvsp: ENSP00000433717.1:p.Ala1120Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4886C>A
  hgvsp: ENSP00000245441.5:p.Ala1629Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4886C>A
  hgvsp: ENSP00000436092.2:p.Ala1629Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2747C>A
  hgvsp: ENSP00000371474.4:p.Ala916Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4886C>A
  hgvsp: ENSP00000324210.9:p.Ala1629Glu
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala1629Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-51219320-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219320
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219320
    reference: chr 14
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4866A>G
  hgvsp: ENST00000530997.2:c.4866A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4866A>G
  hgvsp: ENST00000324330.9:c.4866A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4866A>G
  hgvsp: ENST00000453196.1:c.4866A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3337A>G
  hgvsp: ENST00000530853.1:c.3337A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4866A>G
  hgvsp: ENST00000245441.5:c.4866A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2727A>G
  hgvsp: ENST00000382043.4:c.2727A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3337A>G
  hgvsp: ENST00000389869.3:c.3337A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4866A>G
  hgvsp: ENST00000476352.1:c.4866A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4866A>G
  hgvsp: ENST00000382041.3:c.4866A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2727A>G
  hgvsp: ENST00000389868.3:c.2727A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1622Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

14-51219320-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219320
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219320
    reference: chr 14
allele count: 437
allele frequency: 3.599670510708402e-3
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2727A>C
  hgvsp: ENSP00000371474.4:p.Glu909Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4866A>C
  hgvsp: ENSP00000436092.2:p.Glu1622Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4866A>C
  hgvsp: ENSP00000245441.5:p.Glu1622Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4866A>C
  hgvsp: ENSP00000432924.1:p.Glu1622Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2727A>C
  hgvsp: ENSP00000374518.3:p.Glu909Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4866A>C
  hgvsp: ENSP00000371472.3:p.Glu1622Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3337A>C
  hgvsp: ENSP00000433717.1:p.Glu1113Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3337A>C
  hgvsp: ENSP00000374519.3:p.Glu1113Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4866A>C
  hgvsp: ENSP00000324210.9:p.Glu1622Asp
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4866A>C
  hgvsp: ENSP00000412391.1:p.Glu1622Asp
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 9.75e1
  variant carriers: 415
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Glu1622Asp
num of homozygotes: 8
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

14-51219325-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219325
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219325
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4861A>G
  hgvsp: ENSP00000245441.5:p.Lys1621Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3332A>G
  hgvsp: ENSP00000433717.1:p.Lys1112Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4861A>G
  hgvsp: ENSP00000436092.2:p.Lys1621Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4861A>G
  hgvsp: ENSP00000432924.1:p.Lys1621Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3332A>G
  hgvsp: ENSP00000374519.3:p.Lys1112Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4861A>G
  hgvsp: ENSP00000324210.9:p.Lys1621Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4861A>G
  hgvsp: ENSP00000371472.3:p.Lys1621Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2722A>G
  hgvsp: ENSP00000371474.4:p.Lys908Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2722A>G
  hgvsp: ENSP00000374518.3:p.Lys908Glu
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4861A>G
  hgvsp: ENSP00000412391.1:p.Lys1621Glu
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys1621Glu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

14-51219330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219330
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219330
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3327G>A
  hgvsp: ENSP00000374519.3:p.Cys1110Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2717G>A
  hgvsp: ENSP00000371474.4:p.Cys906Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4856G>A
  hgvsp: ENSP00000324210.9:p.Cys1619Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2717G>A
  hgvsp: ENSP00000374518.3:p.Cys906Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4856G>A
  hgvsp: ENSP00000432924.1:p.Cys1619Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4856G>A
  hgvsp: ENSP00000371472.3:p.Cys1619Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4856G>A
  hgvsp: ENSP00000436092.2:p.Cys1619Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4856G>A
  hgvsp: ENSP00000245441.5:p.Cys1619Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4856G>A
  hgvsp: ENSP00000412391.1:p.Cys1619Tyr
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3327G>A
  hgvsp: ENSP00000433717.1:p.Cys1110Tyr
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys1619Tyr
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-51219332-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219332
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219332
    reference: chr 14
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3325A>G
  hgvsp: ENST00000389869.3:c.3325A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4854A>G
  hgvsp: ENST00000530997.2:c.4854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4854A>G
  hgvsp: ENST00000382041.3:c.4854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4854A>G
  hgvsp: ENST00000245441.5:c.4854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3325A>G
  hgvsp: ENST00000530853.1:c.3325A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2715A>G
  hgvsp: ENST00000389868.3:c.2715A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4854A>G
  hgvsp: ENST00000324330.9:c.4854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2715A>G
  hgvsp: ENST00000382043.4:c.2715A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4854A>G
  hgvsp: ENST00000476352.1:c.4854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4854A>G
  hgvsp: ENST00000453196.1:c.4854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu1618Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/14-51219333-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 51219333
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 51219333
    reference: chr 14
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000245441
  ensembl transcript: ENST00000245441
  gene symbol: NIN
  hgvsc: ENST00000245441.5:c.4853T>G
  hgvsp: ENSP00000245441.5:p.Leu1618Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371472
  ensembl transcript: ENST00000382041
  gene symbol: NIN
  hgvsc: ENST00000382041.3:c.4853T>G
  hgvsp: ENSP00000371472.3:p.Leu1618Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374519
  ensembl transcript: ENST00000389869
  gene symbol: NIN
  hgvsc: ENST00000389869.3:c.3324T>G
  hgvsp: ENSP00000374519.3:p.Leu1109Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000432924
  ensembl transcript: ENST00000476352
  gene symbol: NIN
  hgvsc: ENST00000476352.1:c.4853T>G
  hgvsp: ENSP00000432924.1:p.Leu1618Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000371474
  ensembl transcript: ENST00000382043
  gene symbol: NIN
  hgvsc: ENST00000382043.4:c.2714T>G
  hgvsp: ENSP00000371474.4:p.Leu905Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000436092
  ensembl transcript: ENST00000530997
  gene symbol: NIN
  hgvsc: ENST00000530997.2:c.4853T>G
  hgvsp: ENSP00000436092.2:p.Leu1618Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000433717
  ensembl transcript: ENST00000530853
  gene symbol: NIN
  hgvsc: ENST00000530853.1:c.3324T>G
  hgvsp: ENSP00000433717.1:p.Leu1109Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000374518
  ensembl transcript: ENST00000389868
  gene symbol: NIN
  hgvsc: ENST00000389868.3:c.2714T>G
  hgvsp: ENSP00000374518.3:p.Leu905Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000412391
  ensembl transcript: ENST00000453196
  gene symbol: NIN
  hgvsc: ENST00000453196.1:c.4853T>G
  hgvsp: ENSP00000412391.1:p.Leu1618Arg
  variant of: http://identifiers.org/hgnc/14906
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100503
  ensembl protein: ENSP00000324210
  ensembl transcript: ENST00000324330
  gene symbol: NIN
  hgvsc: ENST00000324330.9:c.4853T>G
  hgvsp: ENSP00000324210.9:p.Leu1618Arg
  variant of: http://identifiers.org/hgnc/14906
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu1618Arg
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 616
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48461
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.064e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQ
type: SiteQuality
SIO_000300: 4.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.91e-1

DP
type: SiteQuality
SIO_000300: 4.008288e6

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1074
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48461
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.297e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

FS
type: SiteQuality
SIO_000300: 6.59e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 4.00659e6

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48460
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

QD
type: SiteQuality
SIO_000300: 1.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

FS
type: SiteQuality
SIO_000300: 7.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.675e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.884e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 4.005128e6

GenotypeQuality
all individuals: 996
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.040252949045361e-5
allele num: 65784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.367e1

DP
type: SiteQuality
SIO_000300: 1.640881e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.584e0

GenotypeQuality
all individuals: 1343
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34046
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2078
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6101
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518741267237713e-5
allele num: 65844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.531e0

QD
type: SiteQuality
SIO_000300: 1.434e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.58e-1

DP
type: SiteQuality
SIO_000300: 1.651557e6

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 3.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 388
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4150
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 866
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.141751627564181e-5
allele num: 16282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034348828741352e-5
allele num: 65912
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.667915e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

QD
type: SiteQuality
SIO_000300: 1.08e1

GenotypeQuality
all individuals: 1354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.343017806935333e-4
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e-1

DP
type: SiteQuality
SIO_000300: 1.671245e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.45e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

GenotypeQuality
all individuals: 732
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1143
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 9.75e1
variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39866
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.060927553804183e-4
allele num: 65980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.617e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

DP
type: SiteQuality
SIO_000300: 1.682606e6

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43059
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
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variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4154
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66198
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.107243190423842e-5
allele num: 16374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.616e0

FS
type: SiteQuality
SIO_000300: 6.850000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.494e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

MQ
type: SiteQuality
SIO_000300: 5.471e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.081e0

DP
type: SiteQuality
SIO_000300: 1.712836e6

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
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variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43059
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 834
bin: 8.25e1
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GenotypeQuality
all individuals: 4154
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.1547146780592e-4
allele num: 6554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.081e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.616e0

FS
type: SiteQuality
SIO_000300: 6.850000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

MQ
type: SiteQuality
SIO_000300: 5.471e1

QD
type: SiteQuality
SIO_000300: 1.494e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

DP
type: SiteQuality
SIO_000300: 1.712836e6

GenotypeQuality
all individuals: 552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4399
bin: 9.75e1
variant carriers: 329

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 3
allele frequency: 3.325942350332594e-3
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.664793549963352e-4
allele num: 16372
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.063212835878601e-3
allele num: 10346
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.841087297438578e-4
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 291
allele frequency: 4.395637594030392e-3
allele num: 66202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.375726077652094e-3
allele num: 6542
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.142e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.720642e6

QD
type: SiteQuality
SIO_000300: 1.415e1

GenotypeQuality
all individuals: 1307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 243
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GenotypeQuality
all individuals: 549
bin: 3.25e1
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GenotypeQuality
all individuals: 465
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GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 807
bin: 8.25e1
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GenotypeQuality
all individuals: 6105
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510528382828313e-5
allele num: 66202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.720642e6

QD
type: SiteQuality
SIO_000300: 1.415e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.26e0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.142e0

GenotypeQuality
all individuals: 519
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
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GenotypeQuality
all individuals: 824
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 423
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GenotypeQuality
all individuals: 470
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GenotypeQuality
all individuals: 366
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GenotypeQuality
all individuals: 131
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 160
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GenotypeQuality
all individuals: 4108
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 1391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43816
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 2.028593508500773e-3
allele num: 10352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508523155830442e-5
allele num: 66290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

QD
type: SiteQuality
SIO_000300: 1.581e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.719816e6

GenotypeQuality
all individuals: 1385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
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GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44042
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.827708054100158e-4
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66328
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.72122e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.396e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.251e0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 4086
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 5.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

QD
type: SiteQuality
SIO_000300: 1.39e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

FS
type: SiteQuality
SIO_000300: 5.516e0

DP
type: SiteQuality
SIO_000300: 1.723576e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.041e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 369
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GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1371
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variant carriers: 0

GenotypeQuality
all individuals: 45320
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 10

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6317
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.201814740257789e-4
allele num: 66566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.315e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.709e0

DP
type: SiteQuality
SIO_000300: 1.735308e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeQuality
all individuals: 814
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45545
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.44e0

QD
type: SiteQuality
SIO_000300: 1.122e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

FS
type: SiteQuality
SIO_000300: 1.069e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.863e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

DP
type: SiteQuality
SIO_000300: 1.737576e6

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45545
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 4088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 1.069e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.122e1

DP
type: SiteQuality
SIO_000300: 1.737576e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.863e0

GenotypeDepth
all individuals: 450
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4088
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001020346917952e-5
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 1.73895e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.66e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.804e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 1.951e0

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 45791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.25e1
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GenotypeQuality
all individuals: 4089
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.739512e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.708e0

QD
type: SiteQuality
SIO_000300: 1.312e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.99e-2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

VQSLOD
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SIO_000300: -8.268e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ClippingRankSum
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SIO_000300: 4.74e-1

FS
type: SiteQuality
SIO_000300: 1.707e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

DP
type: SiteQuality
SIO_000300: 1.740134e6

QD
type: SiteQuality
SIO_000300: 1.21e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.69e-1

FS
type: SiteQuality
SIO_000300: 4.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.740407e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.15e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
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SIO_000300: -4.44e-1

BaseQRankSum
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SIO_000300: -3.474e0

DP
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SIO_000300: 1.740527e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.625e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.11e0

MQRankSum
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SIO_000300: -1.29e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.740582e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: -1.854e0

FS
type: SiteQuality
SIO_000300: 3.311e0

MQ
type: SiteQuality
SIO_000300: 5.819e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

QD
type: SiteQuality
SIO_000300: 1.02e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 312

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 291
allele frequency: 2.796463578704593e-2
allele num: 10406
num of homozygotes: 5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.817552362818072e-3
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.91e0

MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

FS
type: SiteQuality
SIO_000300: 5.34e-1

QD
type: SiteQuality
SIO_000300: 1.41e1

DP
type: SiteQuality
SIO_000300: 1.761548e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
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South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.042e-1

MQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 40

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 1.664648910411622e-3
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 28
allele frequency: 4.196768488264037e-4
allele num: 66718
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.541326067211626e-4
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.845548152634767e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

DP
type: SiteQuality
SIO_000300: 1.733393e6

FS
type: SiteQuality
SIO_000300: 6.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.34e1

GenotypeQuality
all individuals: 505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.796e1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.82e-1

DP
type: SiteQuality
SIO_000300: 1.732172e6

FS
type: SiteQuality
SIO_000300: 3.155e0

QD
type: SiteQuality
SIO_000300: 1.86e1

VQSLOD
type: SiteQuality
SIO_000300: -1.357e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.441e1

FS
type: SiteQuality
SIO_000300: 7.389e0

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

DP
type: SiteQuality
SIO_000300: 1.730505e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.85e-1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.614e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

DP
type: SiteQuality
SIO_000300: 1.728606e6

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 66
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GenotypeQuality
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GenotypeQuality
all individuals: 6291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506114826194349e-5
allele num: 66396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

FS
type: SiteQuality
SIO_000300: 2.533e0

DP
type: SiteQuality
SIO_000300: 1.726084e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.763e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: -1.256e-1

GenotypeDepth
all individuals: 450
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 262
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 504
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.943634596695821e-4
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.55e-1

DP
type: SiteQuality
SIO_000300: 1.711897e6

FS
type: SiteQuality
SIO_000300: 2.394e0

VQSLOD
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.292e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 187
allele frequency: 1.15346656797434e-2
allele num: 16212
num of homozygotes: 3

Latino
type: Population
allele count: 1
allele frequency: 8.882572392965002e-5
allele num: 11258
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.497e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.32e-2

DP
type: SiteQuality
SIO_000300: 1.642522e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.936406995230525e-5
allele num: 10064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559332605644784e-5
allele num: 64130
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.642522e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 499
bin: 9.25e1
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GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563526063979486e-5
allele num: 63958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e-1

QD
type: SiteQuality
SIO_000300: 5.86e0

VQSLOD
type: SiteQuality
SIO_000300: -1.461e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.631215e6

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3972
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 749
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.963786303334529e-5
allele num: 11156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.612859e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.04e1

VQSLOD
type: SiteQuality
SIO_000300: -1.041e0

MQ
type: SiteQuality
SIO_000300: 4.602e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.31e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 325
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GenotypeQuality
all individuals: 1055
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58609313538891e-5
allele num: 63048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.26e0

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.551927e6

VQSLOD
type: SiteQuality
SIO_000300: -6.492e-1

FS
type: SiteQuality
SIO_000300: 5.051e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7814
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.762699109494544e-4
allele num: 15946
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.206464231891493e-5
allele num: 62374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.741e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

DP
type: SiteQuality
SIO_000300: 1.472322e6

FS
type: SiteQuality
SIO_000300: 3.773e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

QD
type: SiteQuality
SIO_000300: 3.02e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

GenotypeQuality
all individuals: 543
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.290890790135883e-5
allele num: 15896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

DP
type: SiteQuality
SIO_000300: 1.414526e6

MQ
type: SiteQuality
SIO_000300: 5.485e1

MQRankSum
type: SiteQuality
SIO_000300: -1.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

QD
type: SiteQuality
SIO_000300: 1.803e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

GenotypeQuality
all individuals: 17625
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 251

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9703
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GenotypeQuality
all individuals: 703
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.928406466512702e-3
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.307520476545048e-5
allele num: 10744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 133
allele frequency: 2.167535853976532e-3
allele num: 61360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 117
allele frequency: 1.822429906542056e-2
allele num: 6420
num of homozygotes: 4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.361092e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

QD
type: SiteQuality
SIO_000300: 1.573e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 171
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.061e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

DP
type: SiteQuality
SIO_000300: 2.295683e6

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.306437e6

FS
type: SiteQuality
SIO_000300: 1.104e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.372e1

GenotypeQuality
all individuals: 2057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3010
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 42
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 252
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.652e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.149e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.534e1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

DP
type: SiteQuality
SIO_000300: 2.303066e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.04e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.303909e6

FS
type: SiteQuality
SIO_000300: 4.842e0

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.805e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.84e-1

QD
type: SiteQuality
SIO_000300: 1.766e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.814e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

VQSLOD
type: SiteQuality
SIO_000300: 8.82e-1

DP
type: SiteQuality
SIO_000300: 2.304157e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.305199e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

MQ
type: SiteQuality
SIO_000300: 5.851e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.566000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.563e0

VQSLOD
type: SiteQuality
SIO_000300: -2.6e0

FS
type: SiteQuality
SIO_000300: 4.415e0

QD
type: SiteQuality
SIO_000300: 1.188e1

GenotypeDepth
all individuals: 171
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variant carriers: 0

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3006
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.348e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

FS
type: SiteQuality
SIO_000300: 1.563e0

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

BaseQRankSum
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SIO_000300: -3.155e0

MQRankSum
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SIO_000300: 4.84e-1

InbreedingCoeff
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SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.305274e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

MQ
type: SiteQuality
SIO_000300: 5.992e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 232

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2360
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GenotypeQuality
all individuals: 2
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variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 217
allele frequency: 2.507510977582621e-2
allele num: 8654
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498531439189594e-4
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.909e0

FS
type: SiteQuality
SIO_000300: 2.296e0

ReadPosRankSum
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DP
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MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

VQSLOD
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SIO_000300: 1.91e0

InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.35e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.381e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
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SIO_000300: 9.65e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 2.204e0

ClippingRankSum
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SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 2.294047e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 215
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GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
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SIO_000300: 8.77e-1

MQRankSum
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SIO_000300: -2.39e-1

FS
type: SiteQuality
SIO_000300: 2.204e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

QD
type: SiteQuality
SIO_000300: 1.381e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.65e-1

DP
type: SiteQuality
SIO_000300: 2.294047e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 7
allele frequency: 6.046993780234969e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

MQ
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SIO_000300: 5.966e1

MQRankSum
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SIO_000300: 9.01e-1

ReadPosRankSum
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 7.46e0

DP
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SIO_000300: 2.294515e6

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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QD
type: SiteQuality
SIO_000300: 1.49e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
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SIO_000300: -3.0e-4

DP
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SIO_000300: 2.292821e6

BaseQRankSum
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SIO_000300: 4.86e0

FS
type: SiteQuality
SIO_000300: 8.110000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

MQRankSum
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SIO_000300: -3.02e-1

ClippingRankSum
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SIO_000300: -2.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 1.467e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 3.634161114476075e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.293402e6

VQSLOD
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SIO_000300: 1.13e0

ReadPosRankSum
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SIO_000300: 6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 1.273e1

ClippingRankSum
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SIO_000300: -1.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.04e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.133e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

MQRankSum
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QD
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: -4.0e-3

ReadPosRankSum
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QD
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
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InbreedingCoeff
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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VQSLOD
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FS
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

South Asian
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East Asian
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VQSLOD
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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African
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allele frequency: 0.0e0
allele num: 10402
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DP
type: SiteQuality
SIO_000300: 2.293133e6

InbreedingCoeff
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SIO_000300: -3.0e-4

ReadPosRankSum
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BaseQRankSum
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SIO_000300: 5.600000000000001e-1

ClippingRankSum
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SIO_000300: -4.94e-1

MQ
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SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 1.117e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
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SIO_000300: 1.67e0

QD
type: SiteQuality
SIO_000300: 1.153e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
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MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
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ClippingRankSum
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FS
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ReadPosRankSum
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SIO_000300: 1.17e0

InbreedingCoeff
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SIO_000300: -3.0e-4

MQRankSum
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DP
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SIO_000300: 2.292535e6

VQSLOD
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BaseQRankSum
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SIO_000300: 1.79e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 8.990919171636647e-5
allele num: 66734
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

ClippingRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

FS
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SIO_000300: 5.22e-1

QD
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SIO_000300: 1.254e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
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SIO_000300: 2.292412e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 12
allele frequency: 7.26832222895215e-4
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.217e0

FS
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MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
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SIO_000300: 6.1e0

QD
type: SiteQuality
SIO_000300: 1.223e1

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

DP
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SIO_000300: 2.292731e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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DP
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FS
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ReadPosRankSum
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SIO_000300: 2.23e0

ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
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Other
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.526e1

VQSLOD
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

African
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allele count: 427
allele frequency: 4.104979811574697e-2
allele num: 10402
num of homozygotes: 8

Latino
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allele frequency: 5.182242183451373e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

East Asian
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South Asian
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 6.056935190793458e-5
allele num: 16510
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MQRankSum
type: SiteQuality
SIO_000300: 2.88e-1

MQ
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.372e0

DP
type: SiteQuality
SIO_000300: 2.255451e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

FS
type: SiteQuality
SIO_000300: 4.142e0

QD
type: SiteQuality
SIO_000300: 1.125e1

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12312
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40387
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.75e-1

QD
type: SiteQuality
SIO_000300: 1.028e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.255653e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 1.454e0

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.799e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

GenotypeQuality
all individuals: 2055
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40387
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.667e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.551e1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.57e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.844e0

DP
type: SiteQuality
SIO_000300: 2.255484e6