http://identifiers.org/exac.variant/11-20071332-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071332
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071332
    reference: chr 11
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+591C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+591C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+591C>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7085
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10650
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

11-20071332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071332
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071332
    reference: chr 11
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+591C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+591C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+591C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-50C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10650
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

11-20071344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071344
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071344
    reference: chr 11
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-38C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-38C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+603C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-38C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-38C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-38C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+603C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+603C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-38C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3648
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10770
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-20071345-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071345
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071345
    reference: chr 11
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-37G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-37G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-37G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+604G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+604G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-37G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+604G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-37G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-37G>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

11-20071348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071348
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071348
    reference: chr 11
allele count: 94
allele frequency: 7.743763798728046e-4
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+607C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+607C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+607C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-34C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10454
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8154
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11523
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20522
  bin: 9.75e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10793
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-20071364-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071364
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071364
    reference: chr 11
allele count: 10
allele frequency: 8.237096588194593e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-18A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+623A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+623A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-18A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-18A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+623A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-18A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-18A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-18A>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7098
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

11-20071369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071369
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071369
    reference: chr 11
allele count: 8
allele frequency: 6.589568712727751e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4371-13C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4227-13C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4440-13C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+628C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4179-13C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4233-13C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+628C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4371-13C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+628C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7103
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

11-20071386-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071386
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071386
    reference: chr 11
allele count: 19
allele frequency: 1.564919447830527e-4
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+645C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4231C>G
  hgvsp: ENSP00000435395.2:p.Leu1411Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4375C>G
  hgvsp: ENSP00000379394.1:p.Leu1459Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4444C>G
  hgvsp: ENSP00000379396.3:p.Leu1482Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4237C>G
  hgvsp: ENSP00000443489.1:p.Leu1413Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4375C>G
  hgvsp: ENSP00000309577.6:p.Leu1459Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4183C>G
  hgvsp: ENSP00000353871.4:p.Leu1395Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+645C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+645C>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3659
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu1482Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

11-20071388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071388
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071388
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+647C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4185C>T
  hgvsp: ENST00000360655.4:c.4185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4233C>T
  hgvsp: ENST00000527559.2:c.4233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4239C>T
  hgvsp: ENST00000540292.1:c.4239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4377C>T
  hgvsp: ENST00000396085.1:c.4377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4446C>T
  hgvsp: ENST00000396087.3:c.4446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+647C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+647C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4377C>T
  hgvsp: ENST00000349880.4:c.4377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20430
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu1482Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

11-20071409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071409
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071409
    reference: chr 11
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+668T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+668T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4254T>C
  hgvsp: ENST00000527559.2:c.4254T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4260T>C
  hgvsp: ENST00000540292.1:c.4260T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4398T>C
  hgvsp: ENST00000349880.4:c.4398T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4398T>C
  hgvsp: ENST00000396085.1:c.4398T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4206T>C
  hgvsp: ENST00000360655.4:c.4206T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+668T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4467T>C
  hgvsp: ENST00000396087.3:c.4467T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro1489Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

11-20071412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071412
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071412
    reference: chr 11
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4401G>A
  hgvsp: ENST00000349880.4:c.4401G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+671G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4257G>A
  hgvsp: ENST00000527559.2:c.4257G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4470G>A
  hgvsp: ENST00000396087.3:c.4470G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4263G>A
  hgvsp: ENST00000540292.1:c.4263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4209G>A
  hgvsp: ENST00000360655.4:c.4209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4401G>A
  hgvsp: ENST00000396085.1:c.4401G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+671G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+671G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10865
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys1490Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

11-20071418-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071418
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071415
    reference: chr 11
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4266_4268delAAG
  hgvsp: ENSP00000435395.2:p.Arg1422del
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4410_4412delAAG
  hgvsp: ENSP00000309577.6:p.Arg1470del
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4410_4412delAAG
  hgvsp: ENSP00000379394.1:p.Arg1470del
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+680_1628+682delAAG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+680_1628+682delAAG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4272_4274delAAG
  hgvsp: ENSP00000443489.1:p.Arg1424del
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4218_4220delAAG
  hgvsp: ENSP00000353871.4:p.Arg1406del
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4479_4481delAAG
  hgvsp: ENSP00000379396.3:p.Arg1493del
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+680_1628+682delAAG
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4552
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg1493del
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: CAGA
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

11-20071429-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071429
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071429
    reference: chr 11
allele count: 25
allele frequency: 2.059274147048648e-4
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4274T>G
  hgvsp: ENSP00000435395.2:p.Leu1425Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4280T>G
  hgvsp: ENSP00000443489.1:p.Leu1427Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+688T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+688T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4487T>G
  hgvsp: ENSP00000379396.3:p.Leu1496Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4418T>G
  hgvsp: ENSP00000379394.1:p.Leu1473Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+688T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4226T>G
  hgvsp: ENSP00000353871.4:p.Leu1409Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4418T>G
  hgvsp: ENSP00000309577.6:p.Leu1473Arg
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10860
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu1496Arg
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-20071430-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071430
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071430
    reference: chr 11
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4419G>T
  hgvsp: ENST00000396085.1:c.4419G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+689G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4275G>T
  hgvsp: ENST00000527559.2:c.4275G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4227G>T
  hgvsp: ENST00000360655.4:c.4227G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4281G>T
  hgvsp: ENST00000540292.1:c.4281G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4488G>T
  hgvsp: ENST00000396087.3:c.4488G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+689G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4419G>T
  hgvsp: ENST00000349880.4:c.4419G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+689G>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu1496Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

11-20071436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071436
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071436
    reference: chr 11
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+695G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4281G>A
  hgvsp: ENST00000527559.2:c.4281G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4425G>A
  hgvsp: ENST00000349880.4:c.4425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4233G>A
  hgvsp: ENST00000360655.4:c.4233G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4494G>A
  hgvsp: ENST00000396087.3:c.4494G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4425G>A
  hgvsp: ENST00000396085.1:c.4425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4287G>A
  hgvsp: ENST00000540292.1:c.4287G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+695G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+695G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5704
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg1498Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

11-20071437-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071437
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071437
    reference: chr 11
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4282A>G
  hgvsp: ENSP00000435395.2:p.Lys1428Glu
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4426A>G
  hgvsp: ENSP00000379394.1:p.Lys1476Glu
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+696A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4426A>G
  hgvsp: ENSP00000309577.6:p.Lys1476Glu
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4288A>G
  hgvsp: ENSP00000443489.1:p.Lys1430Glu
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4234A>G
  hgvsp: ENSP00000353871.4:p.Lys1412Glu
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4495A>G
  hgvsp: ENSP00000379396.3:p.Lys1499Glu
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+696A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+696A>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4558
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys1499Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

11-20071449-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071449
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071449
    reference: chr 11
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+2T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+2T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+708T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+708T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+708T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+2T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+2T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+2T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+2T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: c.4505+2T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-20071452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071452
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071452
    reference: chr 11
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+5T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+5T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+5T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+5T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+5T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+711T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+711T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+711T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+5T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10448
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
hgvs: c.4505+5T>C
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-20071456-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071456
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071456
    reference: chr 11
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+715A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+9A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+715A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+9A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+9A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+9A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+715A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+9A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+9A>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10683
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6985
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-20071465-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071465
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071465
    reference: chr 11
allele count: 6
allele frequency: 4.949759936643073e-5
allele num: 121218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+724C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+18C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+18C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+724C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+18C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+18C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+724C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+18C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+18C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20277
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

11-20071466-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071466
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071466
    reference: chr 11
allele count: 2
allele frequency: 1.648913366091746e-5
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+19G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+19G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+725G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+725G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+19G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+19G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+19G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+19G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+725G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-20071472-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071472
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071472
    reference: chr 11
allele count: 2
allele frequency: 1.666805567130594e-5
allele num: 119990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+25C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+731C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+731C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+25C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+731C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+25C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+25C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+25C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+25C>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-20071474-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071474
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071474
    reference: chr 11
allele count: 16
allele frequency: 1.357174362976283e-4
allele num: 117892
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+27A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+27A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+27A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+27A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+733A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+27A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+27A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+733A>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+733A>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11025
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7392
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10430
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10031
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6736
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5433
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4985
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

11-20071476-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071476
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071477
    reference: chr 11
allele count: 2
allele frequency: 1.769504361828252e-5
allele num: 113026
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+30dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+736dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+30dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+736dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+736dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+30dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+30dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+30dupG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+30dupG
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 10853
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4880
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5331
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

11-20071476-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071476
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071476
    reference: chr 11
allele count: 123
allele frequency: 1.088245182524375e-3
allele num: 113026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+29C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+29C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+29C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+29C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+29C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+29C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+735C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+735C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+735C>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10266
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10853
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 3.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 1.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4880
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 2.75e1
  variant carriers: 11
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

11-20071477-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071477
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071477
    reference: chr 11
allele count: 9
allele frequency: 7.533145841703495e-5
allele num: 119472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+30G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+736G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+30G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+736G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+736G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+30G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+30G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+30G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+30G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10738
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5013
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8438
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

11-20071481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071481
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071481
    reference: chr 11
allele count: 4
allele frequency: 3.299567756623883e-5
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+740C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+740C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+740C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+34C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+34C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9993
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-20071482-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071482
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071481
    reference: chr 11
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+36delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+36delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+36delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+36delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+742delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+742delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+742delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+36delC
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+36delC
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2965
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: TC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-20071493-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071493
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071493
    reference: chr 11
allele count: 2
allele frequency: 1.650491846570278e-5
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+752C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+46C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+46C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+752C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+46C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+752C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+46C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+46C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+46C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9912
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/11-20071497-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20071497
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20071497
    reference: chr 11
allele count: 6
allele frequency: 4.952456418383518e-5
allele num: 121152
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4298+50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4505+50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1628+756C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4436+50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1628+756C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+756C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4436+50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4244+50C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4292+50C>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10456
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23036
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

11-20072784-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072784
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072784
    reference: chr 11
allele count: 2
allele frequency: 1.651118632873772e-5
allele num: 121130
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2043C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-51C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-51C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9547
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

11-20072785-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072785
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072785
    reference: chr 11
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2044C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-50C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-50C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8817
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

11-20072792-G-GTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072792
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072795
    reference: chr 11
allele count: 1
allele frequency: 8.251097395953662e-6
allele num: 121196
alternate allele: GTGC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-38_4506-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-38_4293-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-38_4299-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-38_4437-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-38_4437-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2056_1628+2058dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-38_1629-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-38_4245-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-38_1629-36dupGCT
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6651
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3796
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39939
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

11-20072793-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072793
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072793
    reference: chr 11
allele count: 2
allele frequency: 1.650083329208125e-5
allele num: 121206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-42T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2052T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8838
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-20072795-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072795
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072795
    reference: chr 11
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2054C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-40C>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-40C>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9606
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

11-20072796-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072796
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072796
    reference: chr 11
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2055T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-39T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-39T>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3828
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-20072800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072800
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072800
    reference: chr 11
allele count: 2
allele frequency: 1.649511744523621e-5
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2059C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-35C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-35C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9624
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3844
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

11-20072811-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072811
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072813
    reference: chr 11
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-20_4299-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-20_4245-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2074_1628+2075dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-20_4506-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-20_4293-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-20_1629-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-20_4437-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-20_4437-19dupTT
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-20_1629-19dupTT
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40023
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-20072820-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072820
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072820
    reference: chr 11
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4245-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4506-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1629-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1629-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2079T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4293-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4437-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4437-15T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4299-15T>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-20072841-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072841
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072841
    reference: chr 11
allele count: 8
allele frequency: 6.589894396942289e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4443G>T
  hgvsp: ENST00000396085.1:c.4443G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2100G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1635G>T
  hgvsp: ENST00000311043.8:c.1635G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1635G>T
  hgvsp: ENST00000533917.1:c.1635G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4443G>T
  hgvsp: ENST00000349880.4:c.4443G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4251G>T
  hgvsp: ENST00000360655.4:c.4251G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4305G>T
  hgvsp: ENST00000540292.1:c.4305G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4299G>T
  hgvsp: ENST00000527559.2:c.4299G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4512G>T
  hgvsp: ENST00000396087.3:c.4512G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro1504Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-20072845-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072845
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072845
    reference: chr 11
allele count: 5
allele frequency: 4.118548294097296e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1639C>G
  hgvsp: ENSP00000312169.8:p.Leu547Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1639C>G
  hgvsp: ENSP00000437316.1:p.Leu547Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4303C>G
  hgvsp: ENSP00000435395.2:p.Leu1435Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4447C>G
  hgvsp: ENSP00000309577.6:p.Leu1483Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2104C>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4516C>G
  hgvsp: ENSP00000379396.3:p.Leu1506Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4255C>G
  hgvsp: ENSP00000353871.4:p.Leu1419Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4309C>G
  hgvsp: ENSP00000443489.1:p.Leu1437Val
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4447C>G
  hgvsp: ENSP00000379394.1:p.Leu1483Val
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu1506Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-20072850-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072850
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072850
    reference: chr 11
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4308T>C
  hgvsp: ENST00000527559.2:c.4308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4452T>C
  hgvsp: ENST00000396085.1:c.4452T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1644T>C
  hgvsp: ENST00000311043.8:c.1644T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1644T>C
  hgvsp: ENST00000533917.1:c.1644T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4452T>C
  hgvsp: ENST00000349880.4:c.4452T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4521T>C
  hgvsp: ENST00000396087.3:c.4521T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4314T>C
  hgvsp: ENST00000540292.1:c.4314T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4260T>C
  hgvsp: ENST00000360655.4:c.4260T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2109T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp1507Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

11-20072865-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072865
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072865
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4536T>C
  hgvsp: ENST00000396087.3:c.4536T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2124T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4323T>C
  hgvsp: ENST00000527559.2:c.4323T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4275T>C
  hgvsp: ENST00000360655.4:c.4275T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4467T>C
  hgvsp: ENST00000349880.4:c.4467T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1659T>C
  hgvsp: ENST00000311043.8:c.1659T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1659T>C
  hgvsp: ENST00000533917.1:c.1659T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4467T>C
  hgvsp: ENST00000396085.1:c.4467T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4329T>C
  hgvsp: ENST00000540292.1:c.4329T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro1512Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

11-20072872-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072872
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072872
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4330G>A
  hgvsp: ENSP00000435395.2:p.Gly1444Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4336G>A
  hgvsp: ENSP00000443489.1:p.Gly1446Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1666G>A
  hgvsp: ENSP00000437316.1:p.Gly556Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1666G>A
  hgvsp: ENSP00000312169.8:p.Gly556Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4282G>A
  hgvsp: ENSP00000353871.4:p.Gly1428Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4474G>A
  hgvsp: ENSP00000309577.6:p.Gly1492Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4474G>A
  hgvsp: ENSP00000379394.1:p.Gly1492Arg
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2131G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4543G>A
  hgvsp: ENSP00000379396.3:p.Gly1515Arg
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly1515Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

11-20072882-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072882
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072882
    reference: chr 11
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2141A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+3A>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+3A>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: c.4550+3A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-20072884-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072884
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072884
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2143C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+5C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+5C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
hgvs: c.4550+5C>T
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-20072886-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072886
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072886
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+7G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2145G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+7G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 7.75e1
  variant carriers: 0
hgvs: c.4550+7G>A
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD

11-20072886-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072886
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072886
    reference: chr 11
allele count: 4
allele frequency: 3.29489291598023e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+7G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2145G>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40042
  bin: 9.75e1
  variant carriers: 4
hgvs: c.4550+7G>C
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

11-20072886-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072886
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072886
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+7G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2145G>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40042
  bin: 9.75e1
  variant carriers: 1
hgvs: c.4550+7G>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

11-20072887-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072887
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072887
    reference: chr 11
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2146T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+8T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+8T>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40042
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: c.4550+8T>G
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-20072889-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072889
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072889
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2148T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+10T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+10T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-20072895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072895
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072895
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2154C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+16C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+16C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

11-20072906-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072906
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072906
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2165T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+27T>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+27T>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

11-20072919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072919
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072919
    reference: chr 11
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2178G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+40G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+40G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2446
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

11-20072921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072921
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072921
    reference: chr 11
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2180C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+42C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+42C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3516
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40042
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-20072922-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072922
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072922
    reference: chr 11
allele count: 9
allele frequency: 7.413631196560076e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2181T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+43T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+43T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

11-20072924-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072924
    reference: chr 11
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2183T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+45T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+45T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

11-20072926-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072926
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072926
    reference: chr 11
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2185G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+47G>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+47G>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

11-20072927-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072927
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072926
    reference: chr 11
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2187delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+49delG
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+49delG
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3864
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: AG
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

11-20072928-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20072928
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20072928
    reference: chr 11
allele count: 4
allele frequency: 3.295381522795802e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4289+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4337+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4481+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1673+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1628+2187G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4550+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1673+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4481+49G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4343+49G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3519
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3863
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3427
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

11-20075583-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075583
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075583
    reference: chr 11
allele count: 1
allele frequency: 8.451085119329322e-6
allele num: 118328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-43G>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-43G>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32886
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

11-20075586-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075586
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075586
    reference: chr 11
allele count: 1
allele frequency: 8.43668269636379e-6
allele num: 118530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-40T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-40T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23595
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

11-20075595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075595
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075595
    reference: chr 11
allele count: 1
allele frequency: 8.420768984623676e-6
allele num: 118754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-31G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-31G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-20075596-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075596
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075596
    reference: chr 11
allele count: 1
allele frequency: 8.413825598223e-6
allele num: 118852
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-30T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-30T>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27157
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

11-20075597-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075597
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075597
    reference: chr 11
allele count: 1
allele frequency: 8.408590215764425e-6
allele num: 118926
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-29T>G
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-29T>G
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-20075603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075603
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075603
    reference: chr 11
allele count: 40
allele frequency: 3.359029912161368e-4
allele num: 119082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-23C>T
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-23C>T
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28992
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17656
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42121
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 1
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

11-20075604-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075604
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075604
    reference: chr 11
allele count: 4
allele frequency: 3.355535795178095e-5
allele num: 119206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-22G>A
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-22G>A
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17788
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

11-20075617-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075617
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075617
    reference: chr 11
allele count: 1
allele frequency: 8.350033400133601e-6
allele num: 119760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1674-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4482-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1674-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4338-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4482-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4290-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4551-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1629-9T>C
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4344-9T>C
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43655
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS

11-20075628-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075628
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075628
    reference: chr 11
allele count: 2
allele frequency: 1.666305633779348e-5
allele num: 120026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1676A>G
  hgvsp: ENSP00000437316.1:p.Tyr559Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1631A>G
  hgvsp: ENSP00000437136.1:p.Tyr544Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4340A>G
  hgvsp: ENSP00000435395.2:p.Tyr1447Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4484A>G
  hgvsp: ENSP00000309577.6:p.Tyr1495Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4484A>G
  hgvsp: ENSP00000379394.1:p.Tyr1495Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1676A>G
  hgvsp: ENSP00000312169.8:p.Tyr559Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4292A>G
  hgvsp: ENSP00000353871.4:p.Tyr1431Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4346A>G
  hgvsp: ENSP00000443489.1:p.Tyr1449Cys
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4553A>G
  hgvsp: ENSP00000379396.3:p.Tyr1518Cys
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29153
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19415
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr1518Cys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS

11-20075628-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20075628
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 20075628
    reference: chr 11
allele count: 1
allele frequency: 8.33152816889674e-6
allele num: 120026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437136
  ensembl transcript: ENST00000525322
  gene symbol: NAV2
  hgvsc: ENST00000525322.1:c.1631A>T
  hgvsp: ENSP00000437136.1:p.Tyr544Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000312169
  ensembl transcript: ENST00000311043
  gene symbol: NAV2
  hgvsc: ENST00000311043.8:c.1676A>T
  hgvsp: ENSP00000312169.8:p.Tyr559Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379394
  ensembl transcript: ENST00000396085
  gene symbol: NAV2
  hgvsc: ENST00000396085.1:c.4484A>T
  hgvsp: ENSP00000379394.1:p.Tyr1495Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000435395
  ensembl transcript: ENST00000527559
  gene symbol: NAV2
  hgvsc: ENST00000527559.2:c.4340A>T
  hgvsp: ENSP00000435395.2:p.Tyr1447Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000379396
  ensembl transcript: ENST00000396087
  gene symbol: NAV2
  hgvsc: ENST00000396087.3:c.4553A>T
  hgvsp: ENSP00000379396.3:p.Tyr1518Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000353871
  ensembl transcript: ENST00000360655
  gene symbol: NAV2
  hgvsc: ENST00000360655.4:c.4292A>T
  hgvsp: ENSP00000353871.4:p.Tyr1431Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000309577
  ensembl transcript: ENST00000349880
  gene symbol: NAV2
  hgvsc: ENST00000349880.4:c.4484A>T
  hgvsp: ENSP00000309577.6:p.Tyr1495Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000443489
  ensembl transcript: ENST00000540292
  gene symbol: NAV2
  hgvsc: ENST00000540292.1:c.4346A>T
  hgvsp: ENSP00000443489.1:p.Tyr1449Phe
  variant of: http://identifiers.org/hgnc/15997
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000166833
  ensembl protein: ENSP00000437316
  ensembl transcript: ENST00000533917
  gene symbol: NAV2
  hgvsc: ENST00000533917.1:c.1676A>T
  hgvsp: ENSP00000437316.1:p.Tyr559Phe
  variant of: http://identifiers.org/hgnc/15997
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr1518Phe
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 5700
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.322e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
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SIO_000300: -1.329e0

ClippingRankSum
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SIO_000300: 5.11e-1

VQSLOD
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MQRankSum
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SIO_000300: 1.44e0

DP
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InbreedingCoeff
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SIO_000300: 3.0e-4

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.232e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.0e-4

MQRankSum
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ClippingRankSum
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SIO_000300: 5.11e-1

FS
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SIO_000300: 3.232e0

QD
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ReadPosRankSum
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SIO_000300: 1.02e0

BaseQRankSum
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SIO_000300: -1.329e0

VQSLOD
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SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.273e0

ClippingRankSum
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SIO_000300: -1.079e0

ReadPosRankSum
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SIO_000300: 1.12e0

BaseQRankSum
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SIO_000300: -2.853e0

InbreedingCoeff
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SIO_000300: 1.0e-4

DP
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.556695e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
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allele count: 93
allele frequency: 5.632949727437916e-3
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 2.558598e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.637e0

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.15606936416185e-3
allele num: 8650
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South Asian
type: Population
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MQ
type: SiteQuality
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BaseQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
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South Asian
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allele num: 16512
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East Asian
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Latino
type: Population
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allele frequency: 8.637070305752289e-5
allele num: 11578
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
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QD
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
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East Asian
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allele frequency: 1.964409521608505e-3
allele num: 8654
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South Asian
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European (Finnish)
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Latino
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allele frequency: 8.637070305752289e-5
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num of homozygotes: 0

African
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VQSLOD
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MQ
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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East Asian
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allele count: 0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

FS
type: SiteQuality
SIO_000300: 3.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.921e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
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SIO_000300: -9.6e-2

ClippingRankSum
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SIO_000300: 1.35e0

InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 1.04e0

QD
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SIO_000300: 1.167e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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InbreedingCoeff
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FS
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.317e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.54e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.861e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.701e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

QD
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SIO_000300: 1.553e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 25
allele frequency: 3.745991788785999e-4
allele num: 66738
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 2.553573e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

FS
type: SiteQuality
SIO_000300: 5.93e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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num of homozygotes: 0

DP
type: SiteQuality
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
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African
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East Asian
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Other
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European (Non-Finnish)
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allele num: 66738
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European (Finnish)
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DP
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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FS
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MQ
type: SiteQuality
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
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Latino
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Other
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
type: SiteQuality
SIO_000300: 1.411e1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20392
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 81
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3010
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7069
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 1.708e0

DP
type: SiteQuality
SIO_000300: 2.548965e6

VQSLOD
type: SiteQuality
SIO_000300: -1.338e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.186e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3637
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.711e0

MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

DP
type: SiteQuality
SIO_000300: 2.545385e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.38e1

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.81e-1

GenotypeQuality
all individuals: 4537
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5328
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.360000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.52097e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
all individuals: 811
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20304
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6738
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 119
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variant carriers: 0

GenotypeQuality
all individuals: 5611
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 7.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.673e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.519843e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

GenotypeQuality
all individuals: 5237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
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variant carriers: 0

GenotypeQuality
all individuals: 868
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variant carriers: 0

GenotypeQuality
all individuals: 8238
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variant carriers: 0

GenotypeQuality
all individuals: 168
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 298
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variant carriers: 0

GenotypeQuality
all individuals: 20183
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66024
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

FS
type: SiteQuality
SIO_000300: 5.732e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

DP
type: SiteQuality
SIO_000300: 2.467636e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 373
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 850
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 362
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7343
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variant carriers: 0

GenotypeQuality
all individuals: 4330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2835
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 628
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19720
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.388032078963603e-4
allele num: 64840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.758101243650377e-5
allele num: 11418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177301624676242e-4
allele num: 8494
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.102040816326531e-4
allele num: 9800
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.6668e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.157e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.434e0

QD
type: SiteQuality
SIO_000300: 5.3e-1

DP
type: SiteQuality
SIO_000300: 2.451304e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.93e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 281
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3061
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19675
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 581
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variant carriers: 0

GenotypeQuality
all individuals: 4826
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7416
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.214607175003214e-5
allele num: 62216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.802e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 3.0029e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

DP
type: SiteQuality
SIO_000300: 2.481436e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.164e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.115e0

QD
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 3061
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 294
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 19675
bin: 9.75e1
variant carriers: 39

GenotypeQuality
all individuals: 540
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 620
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 281
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 581
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 381
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 671
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 7416
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4826
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 4270
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 550
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 5331
bin: 6.75e1
variant carriers: 7

African
type: Population
allele count: 11
allele frequency: 1.197735191637631e-3
allele num: 9184
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.443792766373412e-4
allele num: 16368
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.842751842751843e-3
allele num: 8140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 65
allele frequency: 1.044747331876045e-3
allele num: 62216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 21
allele frequency: 4.043126684636119e-3
allele num: 5194
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.503693028283192e-4
allele num: 11102
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.4330900243309e-3
allele num: 822
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.164e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.115e0

VQSLOD
type: SiteQuality
SIO_000300: -3.802e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

DP
type: SiteQuality
SIO_000300: 2.481436e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

FS
type: SiteQuality
SIO_000300: 3.0029e1

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2951
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5232
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3333
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22299
bin: 9.75e1
variant carriers: 9

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.850836769342711e-4
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 2.54528e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.388e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

QD
type: SiteQuality
SIO_000300: 1.459e1

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.458412588621823e-4
allele num: 11566
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.168e0

DP
type: SiteQuality
SIO_000300: 2.558653e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

FS
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ClippingRankSum
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SIO_000300: -1.408e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.638e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.395e0

QD
type: SiteQuality
SIO_000300: 1.621e1

DP
type: SiteQuality
SIO_000300: 2.55561e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001921229586936e-5
allele num: 66624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.353e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.534e0

FS
type: SiteQuality
SIO_000300: 4.873e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 2.545137e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.505253677574302e-5
allele num: 66620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.309e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.371e0

DP
type: SiteQuality
SIO_000300: 2.541381e6

FS
type: SiteQuality
SIO_000300: 2.698e0

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
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Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 1.164415463437354e-4
allele num: 8588
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African
type: Population
allele count: 0
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Other
type: Population
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ReadPosRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele frequency: 1.500915558490679e-5
allele num: 66626
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Other
type: Population
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MQ
type: SiteQuality
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FS
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MQRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.0016509079994e-5
allele num: 66630
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Other
type: Population
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

African
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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QD
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MQ
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ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39965
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.306e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 3.035937e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.656e0

MQ
type: SiteQuality
SIO_000300: 5.91e1

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.188e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

DP
type: SiteQuality
SIO_000300: 3.036629e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.330000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.229e0

QD
type: SiteQuality
SIO_000300: 1.33e1

FS
type: SiteQuality
SIO_000300: 1.184e0

DP
type: SiteQuality
SIO_000300: 3.039464e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

FS
type: SiteQuality
SIO_000300: 9.012e0

DP
type: SiteQuality
SIO_000300: 3.042483e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-1

QD
type: SiteQuality
SIO_000300: 1.51e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

VQSLOD
type: SiteQuality
SIO_000300: -9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: -1.055e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.648e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 3.043192e6

QD
type: SiteQuality
SIO_000300: 1.358e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.198789222884886e-4
allele num: 66734
num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.028467595396729e-4
allele num: 16510
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: -8.26e-1

FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

East Asian
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Other
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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MQRankSum
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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DP
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MQ
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FS
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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MQRankSum
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DP
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GenotypeQuality
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African
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East Asian
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South Asian
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VQSLOD
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QD
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MQRankSum
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MQ
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DP
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FS
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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InbreedingCoeff
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ReadPosRankSum
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MQ
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FS
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DP
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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DP
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MQRankSum
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FS
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QD
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQ
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FS
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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MQ
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BaseQRankSum
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MQRankSum
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FS
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DP
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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DP
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 1.15e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8652
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QD
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DP
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
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Other
type: Population
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num of homozygotes: 0

MQ
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DP
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FS
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SIO_000300: 8.76e-1

ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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DP
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InbreedingCoeff
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MQ
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FS
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.198825151351675e-4
allele num: 66732
num of homozygotes: 0

Other
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66732
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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South Asian
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African
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Other
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MQ
type: SiteQuality
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10404
num of homozygotes: 0

South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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Latino
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994485073732166e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.412e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.53e-1

DP
type: SiteQuality
SIO_000300: 3.044373e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.241e1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

FS
type: SiteQuality
SIO_000300: 7.82e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.241418050181001e-5
allele num: 16022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.053e1

VQSLOD
type: SiteQuality
SIO_000300: -5.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.459e0

DP
type: SiteQuality
SIO_000300: 1.410484e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.585e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16032
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188777936281503e-4
allele num: 8412
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.073e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.422709e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.762e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11288
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.187366421277606e-4
allele num: 8422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

DP
type: SiteQuality
SIO_000300: 1.457929e6

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 694
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GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16080
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528023959415684e-5
allele num: 65444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.460784e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.821e-1

QD
type: SiteQuality
SIO_000300: 7.27e0

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39612
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GenotypeQuality
all individuals: 297
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.214267959234402e-5
allele num: 16092
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

FS
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

MQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.433e-1

DP
type: SiteQuality
SIO_000300: 1.463559e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.34e-1

QD
type: SiteQuality
SIO_000300: 1.191e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 37

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 3.029118624193864e-3
allele num: 10234
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.050919852335479e-5
allele num: 65554
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.207324643078833e-5
allele num: 16110
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.531073446327684e-4
allele num: 11328
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.362390739428301e-4
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

QD
type: SiteQuality
SIO_000300: 1.187e1

FS
type: SiteQuality
SIO_000300: 3.936e0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.486543e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.357934449422306e-4
allele num: 8482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.198859409868585e-5
allele num: 16132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524204365321302e-5
allele num: 65608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.167e0

DP
type: SiteQuality
SIO_000300: 1.49046e6

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516898246465627e-5
allele num: 65924
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 730
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.043e1

DP
type: SiteQuality
SIO_000300: 1.521987e6

MQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

FS
type: SiteQuality
SIO_000300: 2.732e0