14-105935814-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935814
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935814
    reference: chr 14
allele count: 2
allele frequency: 1.667083437526048e-5
allele num: 119970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1773C>T
  hgvsp: ENST00000405646.1:c.1773C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1824C>T
  hgvsp: ENST00000331320.7:c.1824C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1292C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.60C>T
  hgvsp: ENST00000426567.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.444C>T
  hgvsp: ENST00000435036.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.503C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.11C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*484C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.103C>T
  hgvsp: ENST00000494981.1:c.103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1788C>T
  hgvsp: ENST00000406191.1:c.1788C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+838G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1212C>T
  hgvsp: ENST00000434050.1:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8221
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn608Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

14-105935817-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935817
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935817
    reference: chr 14
allele count: 2
allele frequency: 1.667083437526048e-5
allele num: 119970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1295C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1776C>T
  hgvsp: ENST00000405646.1:c.1776C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1827C>T
  hgvsp: ENST00000331320.7:c.1827C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1791C>T
  hgvsp: ENST00000406191.1:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.447C>T
  hgvsp: ENST00000435036.2:c.447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+835G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.63C>T
  hgvsp: ENST00000426567.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1215C>T
  hgvsp: ENST00000434050.1:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*487C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.106C>T
  hgvsp: ENST00000494981.1:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.14C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.506C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His609His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum

14-105935824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935824
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935824
    reference: chr 14
allele count: 115206
allele frequency: 9.588833585803939e-1
allele num: 120146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1798G>A
  hgvsp: ENSP00000385702.1:p.Ala600Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1222G>A
  hgvsp: ENSP00000394106.1:p.Ala408Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.113G>A
  hgvsp: ENSP00000450269.1:p.Ala39Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.21G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1302G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1834G>A
  hgvsp: ENSP00000333633.7:p.Ala612Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.454G>A
  hgvsp: ENSP00000389425.2:p.Ala152Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1783G>A
  hgvsp: ENSP00000384180.1:p.Ala595Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*494G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.70G>A
  hgvsp: ENSP00000395371.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+828C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.513G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 2.25e1
  variant carriers: 1021
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 5.75e1
  variant carriers: 5217
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 3.75e1
  variant carriers: 5112
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 6.75e1
  variant carriers: 3547
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 9.25e1
  variant carriers: 978
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 6.25e1
  variant carriers: 4398
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 4.25e1
  variant carriers: 6201
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 3829
  bin: 3.25e1
  variant carriers: 3616
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 412
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 7.75e1
  variant carriers: 2178
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 9.75e1
  variant carriers: 5766
genotype depth: GenotypeDepth
  all individuals: 6042
  bin: 5.25e1
  variant carriers: 6024
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 7.25e1
  variant carriers: 2730
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 8.25e1
  variant carriers: 1648
genotype quality: GenotypeQuality
hgvs: p.Ala612Thr
num of homozygotes: 56193
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-105935826-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935826
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935826
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 119564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.515C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.115C>A
  hgvsp: ENST00000494981.1:c.115C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1304C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1800C>A
  hgvsp: ENST00000406191.1:c.1800C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+826G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1224C>A
  hgvsp: ENST00000434050.1:c.1224C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1836C>A
  hgvsp: ENST00000331320.7:c.1836C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1785C>A
  hgvsp: ENST00000405646.1:c.1785C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.72C>A
  hgvsp: ENST00000426567.1:c.72C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*496C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.456C>A
  hgvsp: ENST00000435036.2:c.456C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.23C>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala612Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

14-105935826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935826
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935826
    reference: chr 14
allele count: 1
allele frequency: 8.36372152152822e-6
allele num: 119564
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1836C>T
  hgvsp: ENST00000331320.7:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.515C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.115C>T
  hgvsp: ENST00000494981.1:c.115C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.456C>T
  hgvsp: ENST00000435036.2:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1304C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.72C>T
  hgvsp: ENST00000426567.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.23C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1224C>T
  hgvsp: ENST00000434050.1:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1785C>T
  hgvsp: ENST00000405646.1:c.1785C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+826G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1800C>T
  hgvsp: ENST00000406191.1:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*496C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala612Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-105935830-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935830
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935830
    reference: chr 14
allele count: 14
allele frequency: 1.171920778155397e-4
allele num: 119462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1228C>T
  hgvsp: ENSP00000394106.1:p.His410Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.119C>T
  hgvsp: ENSP00000450269.1:p.His41Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.519C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1804C>T
  hgvsp: ENSP00000385702.1:p.His602Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+822G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1789C>T
  hgvsp: ENSP00000384180.1:p.His597Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.27C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.76C>T
  hgvsp: ENSP00000395371.1:p.His26Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1840C>T
  hgvsp: ENSP00000333633.7:p.His614Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*500C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.460C>T
  hgvsp: ENSP00000389425.2:p.His154Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1308C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27343
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.His614Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

14-105935831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935831
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935831
    reference: chr 14
allele count: 1
allele frequency: 8.374227477515199e-6
allele num: 119414
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1841A>G
  hgvsp: ENSP00000333633.7:p.His614Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.461A>G
  hgvsp: ENSP00000389425.2:p.His154Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+821T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.520A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.120A>G
  hgvsp: ENSP00000450269.1:p.His41Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1790A>G
  hgvsp: ENSP00000384180.1:p.His597Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1805A>G
  hgvsp: ENSP00000385702.1:p.His602Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.77A>G
  hgvsp: ENSP00000395371.1:p.His26Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*501A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1229A>G
  hgvsp: ENSP00000394106.1:p.His410Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1309A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.28A>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His614Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

14-105935832-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935832
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935832
    reference: chr 14
allele count: 1
allele frequency: 8.374227477515199e-6
allele num: 119414
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.78C>G
  hgvsp: ENSP00000395371.1:p.His26Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1842C>G
  hgvsp: ENSP00000333633.7:p.His614Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1791C>G
  hgvsp: ENSP00000384180.1:p.His597Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.29C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1806C>G
  hgvsp: ENSP00000385702.1:p.His602Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1310C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.121C>G
  hgvsp: ENSP00000450269.1:p.His41Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*502C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.462C>G
  hgvsp: ENSP00000389425.2:p.His154Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1230C>G
  hgvsp: ENSP00000394106.1:p.His410Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+820G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.521C>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His614Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

14-105935833-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935833
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935833
    reference: chr 14
allele count: 2
allele frequency: 1.675182176061647e-5
allele num: 119390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*503A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.463A>G
  hgvsp: ENSP00000389425.2:p.Met155Val
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1231A>G
  hgvsp: ENSP00000394106.1:p.Met411Val
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.30A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1843A>G
  hgvsp: ENSP00000333633.7:p.Met615Val
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.79A>G
  hgvsp: ENSP00000395371.1:p.Met27Val
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+819T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.122A>G
  hgvsp: ENSP00000450269.1:p.Met42Val
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.522A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1311A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1792A>G
  hgvsp: ENSP00000384180.1:p.Met598Val
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1807A>G
  hgvsp: ENSP00000385702.1:p.Met603Val
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27223
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7958
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met615Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

14-105935834-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935834
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935834
    reference: chr 14
allele count: 1
allele frequency: 8.377314233056882e-6
allele num: 119370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.80T>C
  hgvsp: ENSP00000395371.1:p.Met27Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.523T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*504T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.123T>C
  hgvsp: ENSP00000450269.1:p.Met42Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.464T>C
  hgvsp: ENSP00000389425.2:p.Met155Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1844T>C
  hgvsp: ENSP00000333633.7:p.Met615Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1793T>C
  hgvsp: ENSP00000384180.1:p.Met598Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+818A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1808T>C
  hgvsp: ENSP00000385702.1:p.Met603Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.31T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1232T>C
  hgvsp: ENSP00000394106.1:p.Met411Thr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1312T>C
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met615Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

14-105935836-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935836
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935836
    reference: chr 14
allele count: 1
allele frequency: 8.382370198997468e-6
allele num: 119298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+816C>T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+1G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+1G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7925
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1845+1G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

14-105935838-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935838
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935838
    reference: chr 14
allele count: 1
allele frequency: 8.390106386548982e-6
allele num: 119188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.35A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+3A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+814T>A
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1845+3A>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

14-105935845-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935845
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935845
    reference: chr 14
allele count: 1
allele frequency: 8.408448809363649e-6
allele num: 118928
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+807T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.42A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+10A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+10A>G
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12201
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

14-105935852-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935852
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935852
    reference: chr 14
allele count: 206
allele frequency: 1.737516869095817e-3
allele num: 118560
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.49A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+800T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+17A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+17A>G
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24614
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7250
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 3.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD

14-105935857-G-GGGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935857
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935861
    reference: chr 14
allele count: 1
allele frequency: 8.457517887650332e-6
allele num: 118238
alternate allele: GGGGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+23_1233+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+23_1794+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+23_1313+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+23_524+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+23_1809+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+791_303+794dupACCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+23_124+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+23_465+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+23_1845+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.55_58dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+23_*505+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+23_81+26dupGGGT
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

14-105935860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935860
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935860
    reference: chr 14
allele count: 18
allele frequency: 1.524132091447926e-4
allele num: 118100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.57G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+792C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+25G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+25G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21586
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

14-105935863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935863
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935863
    reference: chr 14
allele count: 6
allele frequency: 5.088367990773093e-5
allele num: 117916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+789G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.60C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+28C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+28C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7182
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9516
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20520
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

14-105935864-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935864
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935864
    reference: chr 14
allele count: 4
allele frequency: 3.393684353418289e-5
allele num: 117866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.61G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+788C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+29G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+29G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20065
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

14-105935865-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935865
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935865
    reference: chr 14
allele count: 1
allele frequency: 8.480901010923401e-6
allele num: 117912
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+787C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.62G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+30G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+30G>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8972
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

14-105935868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935868
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935868
    reference: chr 14
allele count: 1
allele frequency: 8.496321092966746e-6
allele num: 117698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+784G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.65C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+33C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+33C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

14-105935869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935869
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935869
    reference: chr 14
allele count: 2
allele frequency: 1.702417432754511e-5
allele num: 117480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.66G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+34G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+783C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+34G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9712
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD

14-105935871-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935871
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935871
    reference: chr 14
allele count: 1
allele frequency: 8.507452528414892e-6
allele num: 117544
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.68T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+781A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+36T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+36T>C
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

14-105935871-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935871
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935871
    reference: chr 14
allele count: 1
allele frequency: 8.507452528414892e-6
allele num: 117544
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+781A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.68T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+36T>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+36T>G
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

14-105935881-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935881
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935881
    reference: chr 14
allele count: 1
allele frequency: 8.622027556000069e-6
allele num: 115982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.78G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+771C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+46G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+46G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

14-105935884-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935884
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935884
    reference: chr 14
allele count: 1
allele frequency: 8.644387199391435e-6
allele num: 115682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.81C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+768G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+49C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+49C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14165
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

14-105935886-C-CTGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935886
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935890
    reference: chr 14
allele count: 4
allele frequency: 3.46518356809952e-5
allele num: 115434
alternate allele: CTGGG
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+762_303+765dupCCCA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+52_1845+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+52_1233+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+52_524+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+52_124+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+52_1313+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+52_*505+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+52_1794+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.84_87dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+52_81+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+52_465+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+52_1809+55dupTGGG
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12734
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8427
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

14-105935887-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105935887
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105935887
    reference: chr 14
allele count: 1
allele frequency: 8.711104916547614e-6
allele num: 114796
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.465+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1233+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1845+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.524+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1794+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.84T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+765A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.124+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1313+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1809+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.81+52T>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*505+52T>C
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14092
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

14-105936127-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936127
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936127
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 28544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+525T>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.324A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-51A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-51A>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27260
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

14-105936133-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936133
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936133
    reference: chr 14
allele count: 1
allele frequency: 2.876208007363093e-5
allele num: 34768
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.330A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+519T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-45A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-45A>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

14-105936133-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936133
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936132
    reference: chr 14
allele count: 2
allele frequency: 5.752416014726185e-5
allele num: 34768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+518delC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.331delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-44delG
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-44delG
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14411
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27331
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: AG
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

14-105936138-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936138
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936138
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 35918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+514C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.335G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-40G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-40G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28150
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

14-105936145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936145
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936145
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 36986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.342G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+507C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-33G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-33G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29620
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

14-105936148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936148
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936148
    reference: chr 14
allele count: 1
allele frequency: 2.646763008840188e-5
allele num: 37782
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.345G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+504C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-30G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-30G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9278
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

14-105936154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936154
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936154
    reference: chr 14
allele count: 900
allele frequency: 2.170243549553894e-2
allele num: 41470
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.351C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+498G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-24C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-24C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 3.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 2.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 1.25e1
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 31361
  bin: 7.5e0
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 2.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
num of homozygotes: 70
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

14-105936156-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936156
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936156
    reference: chr 14
allele count: 49
allele frequency: 1.158447207905811e-3
allele num: 42298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.353A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+496T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-22A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-22A>T
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31622
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

14-105936163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936163
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936163
    reference: chr 14
allele count: 1
allele frequency: 2.171646977067408e-5
allele num: 46048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.360G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+489C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-15G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-15G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9064
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/14-105936170-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936170
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936170
    reference: chr 14
allele count: 1
allele frequency: 1.95091497912521e-5
allele num: 51258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.367C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-8C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+482G>T
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1846-8C>A
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-105936172-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936172
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936172
    reference: chr 14
allele count: 6
allele frequency: 1.146788990825688e-4
allele num: 52320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1314-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1810-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.125-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.466-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.369C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1234-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1846-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.525-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.82-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1795-6C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+480G>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*506-6C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30107
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1846-6C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

14-105936185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936185
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936185
    reference: chr 14
allele count: 2
allele frequency: 3.224038430538092e-5
allele num: 62034
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+467C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.132G>A
  hgvsp: ENSP00000450269.1:p.Ser45Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.532G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.382G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*513G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1853G>A
  hgvsp: ENSP00000333633.7:p.Ser618Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1321G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.473G>A
  hgvsp: ENSP00000389425.2:p.Ser158Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1241G>A
  hgvsp: ENSP00000394106.1:p.Ser414Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1802G>A
  hgvsp: ENSP00000384180.1:p.Ser601Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.89G>A
  hgvsp: ENSP00000395371.1:p.Ser30Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1817G>A
  hgvsp: ENSP00000385702.1:p.Ser606Asn
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8111
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser618Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/14-105936187-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936187
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936187
    reference: chr 14
allele count: 3
allele frequency: 4.706472969156914e-5
allele num: 63742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1804C>A
  hgvsp: ENST00000405646.1:c.1804C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*515C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.384C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.475C>A
  hgvsp: ENST00000435036.2:c.475C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1819C>A
  hgvsp: ENST00000406191.1:c.1819C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1323C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+465G>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1855C>A
  hgvsp: ENST00000331320.7:c.1855C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.134C>A
  hgvsp: ENST00000494981.1:c.134C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.91C>A
  hgvsp: ENST00000426567.1:c.91C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.534C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1243C>A
  hgvsp: ENST00000434050.1:c.1243C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15290
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg619Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-105936191-ACCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936191
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936188
    reference: chr 14
allele count: 1
allele frequency: 1.479552583298811e-5
allele num: 67588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*523_*525delCCT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1251_1253delCCT
  hgvsp: ENSP00000394106.1:p.Leu419del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.142_144delCCT
  hgvsp: ENSP00000450269.1:p.Leu50del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.483_485delCCT
  hgvsp: ENSP00000389425.2:p.Leu163del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.99_101delCCT
  hgvsp: ENSP00000395371.1:p.Leu35del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1863_1865delCCT
  hgvsp: ENSP00000333633.7:p.Leu623del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1827_1829delCCT
  hgvsp: ENSP00000385702.1:p.Leu611del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1812_1814delCCT
  hgvsp: ENSP00000384180.1:p.Leu606del
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1331_1333delCCT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.392_394delCCT
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+458_303+460delAGG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.542_544delCCT
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu623del
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: ACCT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

14-105936204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936204
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936204
    reference: chr 14
allele count: 13
allele frequency: 1.708009249527013e-4
allele num: 76112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1821C>T
  hgvsp: ENST00000405646.1:c.1821C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1872C>T
  hgvsp: ENST00000331320.7:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.151C>T
  hgvsp: ENST00000494981.1:c.151C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1836C>T
  hgvsp: ENST00000406191.1:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1260C>T
  hgvsp: ENST00000434050.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1340C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.492C>T
  hgvsp: ENST00000435036.2:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.551C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.108C>T
  hgvsp: ENST00000426567.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.401C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*532C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+448G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20933
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6969
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn624Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-105936212-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936212
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936212
    reference: chr 14
allele count: 1
allele frequency: 1.232772011144259e-5
allele num: 81118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*540C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1844C>A
  hgvsp: ENSP00000385702.1:p.Ser615Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.409C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+440G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1829C>A
  hgvsp: ENSP00000384180.1:p.Ser610Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1880C>A
  hgvsp: ENSP00000333633.7:p.Ser627Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.159C>A
  hgvsp: ENSP00000450269.1:p.Ser54Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.559C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1268C>A
  hgvsp: ENSP00000394106.1:p.Ser423Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1348C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.116C>A
  hgvsp: ENSP00000395371.1:p.Ser39Tyr
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.500C>A
  hgvsp: ENSP00000389425.2:p.Ser167Tyr
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22564
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser627Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

14-105936215-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936215
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936215
    reference: chr 14
allele count: 2
allele frequency: 2.41703526454451e-5
allele num: 82746
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+437T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1832A>T
  hgvsp: ENSP00000384180.1:p.Tyr611Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*543A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.162A>T
  hgvsp: ENSP00000450269.1:p.Tyr55Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.562A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.119A>T
  hgvsp: ENSP00000395371.1:p.Tyr40Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.503A>T
  hgvsp: ENSP00000389425.2:p.Tyr168Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1883A>T
  hgvsp: ENSP00000333633.7:p.Tyr628Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1847A>T
  hgvsp: ENSP00000385702.1:p.Tyr616Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1351A>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1271A>T
  hgvsp: ENSP00000394106.1:p.Tyr424Phe
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.412A>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22838
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr628Phe
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

14-105936217-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936217
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936217
    reference: chr 14
allele count: 2
allele frequency: 2.384927259718579e-5
allele num: 83860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.505C>T
  hgvsp: ENSP00000389425.2:p.Pro169Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.564C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1273C>T
  hgvsp: ENSP00000394106.1:p.Pro425Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+435G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1353C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1834C>T
  hgvsp: ENSP00000384180.1:p.Pro612Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*545C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.414C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.164C>T
  hgvsp: ENSP00000450269.1:p.Pro56Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1849C>T
  hgvsp: ENSP00000385702.1:p.Pro617Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1885C>T
  hgvsp: ENSP00000333633.7:p.Pro629Ser
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.121C>T
  hgvsp: ENSP00000395371.1:p.Pro41Ser
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro629Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

14-105936219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936219
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936219
    reference: chr 14
allele count: 2
allele frequency: 2.354104380988253e-5
allele num: 84958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*547C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.166C>T
  hgvsp: ENST00000494981.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1275C>T
  hgvsp: ENST00000434050.1:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1887C>T
  hgvsp: ENST00000331320.7:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.416C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.507C>T
  hgvsp: ENST00000435036.2:c.507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.123C>T
  hgvsp: ENST00000426567.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1836C>T
  hgvsp: ENST00000405646.1:c.1836C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.566C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1851C>T
  hgvsp: ENST00000406191.1:c.1851C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1355C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+433G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro629Pro
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

14-105936230-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936230
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936230
    reference: chr 14
allele count: 1
allele frequency: 1.117043855141753e-5
allele num: 89522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.134G>T
  hgvsp: ENSP00000395371.1:p.Arg45Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.518G>T
  hgvsp: ENSP00000389425.2:p.Arg173Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.177G>T
  hgvsp: ENSP00000450269.1:p.Arg60Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*558G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1847G>T
  hgvsp: ENSP00000384180.1:p.Arg616Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1898G>T
  hgvsp: ENSP00000333633.7:p.Arg633Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1862G>T
  hgvsp: ENSP00000385702.1:p.Arg621Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.427G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.577G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1366G>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+422C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1286G>T
  hgvsp: ENSP00000394106.1:p.Arg429Leu
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg633Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

14-105936231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936231
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936231
    reference: chr 14
allele count: 38
allele frequency: 4.213233989710839e-4
allele num: 90192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1863C>T
  hgvsp: ENST00000406191.1:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1287C>T
  hgvsp: ENST00000434050.1:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1367C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.578C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1899C>T
  hgvsp: ENST00000331320.7:c.1899C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.428C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.135C>T
  hgvsp: ENST00000426567.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.178C>T
  hgvsp: ENST00000494981.1:c.178C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.519C>T
  hgvsp: ENST00000435036.2:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+421G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1848C>T
  hgvsp: ENST00000405646.1:c.1848C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*559C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 14178
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24273
  bin: 2.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
hgvs: p.Arg633Arg
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-105936234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936234
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936234
    reference: chr 14
allele count: 1
allele frequency: 1.089965775074663e-5
allele num: 91746
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+418C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1866G>A
  hgvsp: ENST00000406191.1:c.1866G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.138G>A
  hgvsp: ENST00000426567.1:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1851G>A
  hgvsp: ENST00000405646.1:c.1851G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.181G>A
  hgvsp: ENST00000494981.1:c.181G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1902G>A
  hgvsp: ENST00000331320.7:c.1902G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.581G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.522G>A
  hgvsp: ENST00000435036.2:c.522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1370G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.431G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1290G>A
  hgvsp: ENST00000434050.1:c.1290G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*562G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu634Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-105936239-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936239
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936239
    reference: chr 14
allele count: 1
allele frequency: 1.069221392981631e-5
allele num: 93526
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+413C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1375G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.186G>A
  hgvsp: ENSP00000450269.1:p.Arg63Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1295G>A
  hgvsp: ENSP00000394106.1:p.Arg432Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*567G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.143G>A
  hgvsp: ENSP00000395371.1:p.Arg48Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1871G>A
  hgvsp: ENSP00000385702.1:p.Arg624Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.527G>A
  hgvsp: ENSP00000389425.2:p.Arg176Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1856G>A
  hgvsp: ENSP00000384180.1:p.Arg619Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1907G>A
  hgvsp: ENSP00000333633.7:p.Arg636Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.436G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.586G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25525
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg636Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-105936246-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936246
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936246
    reference: chr 14
allele count: 1
allele frequency: 1.015145977991635e-5
allele num: 98508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.534C>G
  hgvsp: ENST00000435036.2:c.534C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.150C>G
  hgvsp: ENST00000426567.1:c.150C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.443C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.593C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1878C>G
  hgvsp: ENST00000406191.1:c.1878C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1863C>G
  hgvsp: ENST00000405646.1:c.1863C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1302C>G
  hgvsp: ENST00000434050.1:c.1302C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.193C>G
  hgvsp: ENST00000494981.1:c.193C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*574C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1382C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+406G>C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1914C>G
  hgvsp: ENST00000331320.7:c.1914C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly638Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-105936257-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936257
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936257
    reference: chr 14
allele count: 1
allele frequency: 9.677169621429125e-6
allele num: 103336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.161C>A
  hgvsp: ENSP00000395371.1:p.Pro54Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1393C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.604C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1874C>A
  hgvsp: ENSP00000384180.1:p.Pro625Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.545C>A
  hgvsp: ENSP00000389425.2:p.Pro182Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1925C>A
  hgvsp: ENSP00000333633.7:p.Pro642Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1889C>A
  hgvsp: ENSP00000385702.1:p.Pro630Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*585C>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.204C>A
  hgvsp: ENSP00000450269.1:p.Pro69Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+395G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1313C>A
  hgvsp: ENSP00000394106.1:p.Pro438Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.454C>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29253
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro642Gln
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

14-105936261-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936261
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936261
    reference: chr 14
allele count: 1
allele frequency: 9.56553346980161e-6
allele num: 104542
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1878C>G
  hgvsp: ENST00000405646.1:c.1878C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.208C>G
  hgvsp: ENST00000494981.1:c.208C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1893C>G
  hgvsp: ENST00000406191.1:c.1893C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.549C>G
  hgvsp: ENST00000435036.2:c.549C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.608C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1929C>G
  hgvsp: ENST00000331320.7:c.1929C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+391G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1317C>G
  hgvsp: ENST00000434050.1:c.1317C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.458C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1397C>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.165C>G
  hgvsp: ENST00000426567.1:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*589C>G
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29613
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val643Val
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

14-105936263-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936263
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936263
    reference: chr 14
allele count: 1
allele frequency: 9.496676163342831e-6
allele num: 105300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1880A>G
  hgvsp: ENSP00000384180.1:p.Lys627Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.460A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1895A>G
  hgvsp: ENSP00000385702.1:p.Lys632Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.610A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.167A>G
  hgvsp: ENSP00000395371.1:p.Lys56Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*591A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.551A>G
  hgvsp: ENSP00000389425.2:p.Lys184Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1319A>G
  hgvsp: ENSP00000394106.1:p.Lys440Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1399A>G
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.210A>G
  hgvsp: ENSP00000450269.1:p.Lys71Arg
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+389T>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1931A>G
  hgvsp: ENSP00000333633.7:p.Lys644Arg
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys644Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD

14-105936265-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936265
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936265
    reference: chr 14
allele count: 1
allele frequency: 9.464856986010941e-6
allele num: 105654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.553C>T
  hgvsp: ENSP00000389425.2:p.Arg185Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1401C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.169C>T
  hgvsp: ENSP00000395371.1:p.Arg57Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1882C>T
  hgvsp: ENSP00000384180.1:p.Arg628Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.462C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1933C>T
  hgvsp: ENSP00000333633.7:p.Arg645Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*593C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.612C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1897C>T
  hgvsp: ENSP00000385702.1:p.Arg633Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1321C>T
  hgvsp: ENSP00000394106.1:p.Arg441Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.212C>T
  hgvsp: ENSP00000450269.1:p.Arg72Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+387G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg645Trp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

14-105936266-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936266
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936266
    reference: chr 14
allele count: 2
allele frequency: 1.88192784688635e-5
allele num: 106274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.554G>A
  hgvsp: ENSP00000389425.2:p.Arg185Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1402G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1883G>A
  hgvsp: ENSP00000384180.1:p.Arg628Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+386C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1934G>A
  hgvsp: ENSP00000333633.7:p.Arg645Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.170G>A
  hgvsp: ENSP00000395371.1:p.Arg57Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.213G>A
  hgvsp: ENSP00000450269.1:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1322G>A
  hgvsp: ENSP00000394106.1:p.Arg441Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.613G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*594G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1898G>A
  hgvsp: ENSP00000385702.1:p.Arg633Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.463G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg645Gln
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

14-105936268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936268
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936268
    reference: chr 14
allele count: 1
allele frequency: 9.361893349310965e-6
allele num: 106816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.556C>T
  hgvsp: ENSP00000389425.2:p.Arg186Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.172C>T
  hgvsp: ENSP00000395371.1:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1900C>T
  hgvsp: ENSP00000385702.1:p.Arg634Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1936C>T
  hgvsp: ENSP00000333633.7:p.Arg646Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1324C>T
  hgvsp: ENSP00000394106.1:p.Arg442Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*596C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1885C>T
  hgvsp: ENSP00000384180.1:p.Arg629Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.615C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.215C>T
  hgvsp: ENSP00000450269.1:p.Arg73Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+384G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.465C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1404C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11972
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg646Trp
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-105936271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936271
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936271
    reference: chr 14
allele count: 1
allele frequency: 9.25805914048179e-6
allele num: 108014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.618C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1407C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1888C>T
  hgvsp: ENSP00000384180.1:p.Arg630Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.468C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+381G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*599C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1327C>T
  hgvsp: ENSP00000394106.1:p.Arg443Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.559C>T
  hgvsp: ENSP00000389425.2:p.Arg187Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1939C>T
  hgvsp: ENSP00000333633.7:p.Arg647Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.218C>T
  hgvsp: ENSP00000450269.1:p.Arg74Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1903C>T
  hgvsp: ENSP00000385702.1:p.Arg635Trp
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.175C>T
  hgvsp: ENSP00000395371.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3663
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg647Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

14-105936272-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936272
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936272
    reference: chr 14
allele count: 1
allele frequency: 9.236680706421341e-6
allele num: 108264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.560G>A
  hgvsp: ENSP00000389425.2:p.Arg187Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*600G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.219G>A
  hgvsp: ENSP00000450269.1:p.Arg74Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.176G>A
  hgvsp: ENSP00000395371.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1408G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1940G>A
  hgvsp: ENSP00000333633.7:p.Arg647Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1904G>A
  hgvsp: ENSP00000385702.1:p.Arg635Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1328G>A
  hgvsp: ENSP00000394106.1:p.Arg443Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1889G>A
  hgvsp: ENSP00000384180.1:p.Arg630Gln
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.469G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+380C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.619G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12691
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg647Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

14-105936279-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936279
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936279
    reference: chr 14
allele count: 5
allele frequency: 4.525951807665152e-5
allele num: 110474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.567C>T
  hgvsp: ENST00000435036.2:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.476C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*607C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1911C>T
  hgvsp: ENST00000406191.1:c.1911C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1896C>T
  hgvsp: ENST00000405646.1:c.1896C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1415C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.226C>T
  hgvsp: ENST00000494981.1:c.226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1335C>T
  hgvsp: ENST00000434050.1:c.1335C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.626C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1947C>T
  hgvsp: ENST00000331320.7:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+373G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.183C>T
  hgvsp: ENST00000426567.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13417
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32986
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn649Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

14-105936285-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936285
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936285
    reference: chr 14
allele count: 7
allele frequency: 6.270940461899557e-5
allele num: 111626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.573C>T
  hgvsp: ENST00000435036.2:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*613C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.632C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.482C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.189C>T
  hgvsp: ENST00000426567.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.232C>T
  hgvsp: ENST00000494981.1:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1953C>T
  hgvsp: ENST00000331320.7:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1902C>T
  hgvsp: ENST00000405646.1:c.1902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1917C>T
  hgvsp: ENST00000406191.1:c.1917C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1341C>T
  hgvsp: ENST00000434050.1:c.1341C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1421C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+367G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33595
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13914
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile651Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-105936288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936288
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936288
    reference: chr 14
allele count: 70
allele frequency: 6.233303650934996e-4
allele num: 112300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1344C>T
  hgvsp: ENST00000434050.1:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.485C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1905C>T
  hgvsp: ENST00000405646.1:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.635C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1956C>T
  hgvsp: ENST00000331320.7:c.1956C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.235C>T
  hgvsp: ENST00000494981.1:c.235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1920C>T
  hgvsp: ENST00000406191.1:c.1920C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.192C>T
  hgvsp: ENST00000426567.1:c.192C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1424C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+364G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.576C>T
  hgvsp: ENST00000435036.2:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*616C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14211
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 33916
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp652Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

14-105936293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936293
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936293
    reference: chr 14
allele count: 1
allele frequency: 8.804832091852009e-6
allele num: 113574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1429C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.240C>T
  hgvsp: ENSP00000450269.1:p.Pro81Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1349C>T
  hgvsp: ENSP00000394106.1:p.Pro450Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.490C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.581C>T
  hgvsp: ENSP00000389425.2:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1925C>T
  hgvsp: ENSP00000385702.1:p.Pro642Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1961C>T
  hgvsp: ENSP00000333633.7:p.Pro654Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*621C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1910C>T
  hgvsp: ENSP00000384180.1:p.Pro637Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.197C>T
  hgvsp: ENSP00000395371.1:p.Pro66Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.640C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+359G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro654Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

14-105936294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936294
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936294
    reference: chr 14
allele count: 2
allele frequency: 1.756388864494599e-5
allele num: 113870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.582G>A
  hgvsp: ENST00000435036.2:c.582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1430G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.641G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.198G>A
  hgvsp: ENST00000426567.1:c.198G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.241G>A
  hgvsp: ENST00000494981.1:c.241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1350G>A
  hgvsp: ENST00000434050.1:c.1350G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1926G>A
  hgvsp: ENST00000406191.1:c.1926G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1911G>A
  hgvsp: ENST00000405646.1:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1962G>A
  hgvsp: ENST00000331320.7:c.1962G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*622G>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+358C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.491G>A
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15013
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro654Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

14-105936300-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936300
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936300
    reference: chr 14
allele count: 98
allele frequency: 8.521590928853411e-4
allele num: 115002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*628C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1436C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.247C>T
  hgvsp: ENST00000494981.1:c.247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1968C>T
  hgvsp: ENST00000331320.7:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.204C>T
  hgvsp: ENST00000426567.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+352G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1932C>T
  hgvsp: ENST00000406191.1:c.1932C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.647C>T
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1917C>T
  hgvsp: ENST00000405646.1:c.1917C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.588C>T
  hgvsp: ENST00000435036.2:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1356C>T
  hgvsp: ENST00000434050.1:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.497C>T
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35347
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Asp656Asp
num of homozygotes: 2
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

14-105936307-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936307
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936307
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 115754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.504T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1363T>A
  hgvsp: ENSP00000394106.1:p.Tyr455Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+345A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.595T>A
  hgvsp: ENSP00000389425.2:p.Tyr199Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*635T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.254T>A
  hgvsp: ENSP00000450269.1:p.Tyr86Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.211T>A
  hgvsp: ENSP00000395371.1:p.Tyr71Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1975T>A
  hgvsp: ENSP00000333633.7:p.Tyr659Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.654T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1924T>A
  hgvsp: ENSP00000384180.1:p.Tyr642Asn
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1443T>A
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1939T>A
  hgvsp: ENSP00000385702.1:p.Tyr647Asn
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 35574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr659Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-105936310-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 105936310
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 105936310
    reference: chr 14
allele count: 1
allele frequency: 8.624853377492582e-6
allele num: 115944
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257270
  ensembl transcript: ENST00000552675
  gene symbol: RP11-521B24.5
  hgvsc: ENST00000552675.1:n.303+342T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000395371
  ensembl transcript: ENST00000426567
  gene symbol: MTA1
  hgvsc: ENST00000426567.1:c.214A>C
  hgvsp: ENSP00000395371.1:p.Met72Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000450269
  ensembl transcript: ENST00000494981
  gene symbol: MTA1
  hgvsc: ENST00000494981.1:c.257A>C
  hgvsp: ENSP00000450269.1:p.Met87Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481635
  gene symbol: MTA1
  hgvsc: ENST00000481635.1:n.507A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000393438
  ensembl transcript: ENST00000438610
  gene symbol: MTA1
  hgvsc: ENST00000438610.1:c.*638A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000333633
  ensembl transcript: ENST00000331320
  gene symbol: MTA1
  hgvsc: ENST00000331320.7:c.1978A>C
  hgvsp: ENSP00000333633.7:p.Met660Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000394106
  ensembl transcript: ENST00000434050
  gene symbol: MTA1
  hgvsc: ENST00000434050.1:c.1366A>C
  hgvsp: ENSP00000394106.1:p.Met456Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000384180
  ensembl transcript: ENST00000405646
  gene symbol: MTA1
  hgvsc: ENST00000405646.1:c.1927A>C
  hgvsp: ENSP00000384180.1:p.Met643Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000552286
  gene symbol: MTA1
  hgvsc: ENST00000552286.1:n.1446A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000182979
  ensembl transcript: ENST00000481206
  gene symbol: MTA1
  hgvsc: ENST00000481206.1:n.657A>C
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000389425
  ensembl transcript: ENST00000435036
  gene symbol: MTA1
  hgvsc: ENST00000435036.2:c.598A>C
  hgvsp: ENSP00000389425.2:p.Met200Leu
  variant of: http://identifiers.org/hgnc/7410
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000182979
  ensembl protein: ENSP00000385702
  ensembl transcript: ENST00000406191
  gene symbol: MTA1
  hgvsc: ENST00000406191.1:c.1942A>C
  hgvsp: ENSP00000385702.1:p.Met648Leu
  variant of: http://identifiers.org/hgnc/7410
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met660Leu
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 300
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1982
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7844
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4245
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39069
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2847
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.953125e-4
allele num: 10240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65616
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

DP
type: SiteQuality
SIO_000300: 2.779498e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

VQSLOD
type: SiteQuality
SIO_000300: -3.765e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

GenotypeDepth
all individuals: 1982
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 527
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1886
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4146
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39075
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3028
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52401853206535e-5
allele num: 65616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.05e-2

DP
type: SiteQuality
SIO_000300: 2.779725e6

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.08e0

FS
type: SiteQuality
SIO_000300: 4.152e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

GenotypeDepth
all individuals: 1321
bin: 8.75e1
variant carriers: 1305

GenotypeDepth
all individuals: 2484
bin: 2.75e1
variant carriers: 2116

GenotypeDepth
all individuals: 6615
bin: 4.75e1
variant carriers: 6581

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 126

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 188

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 61
bin: 2.25e1
variant carriers: 52

GenotypeQuality
all individuals: 913
bin: 8.25e1
variant carriers: 886

GenotypeQuality
all individuals: 353
bin: 7.25e1
variant carriers: 317

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 79

GenotypeQuality
all individuals: 54304
bin: 9.75e1
variant carriers: 54078

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 89

GenotypeQuality
all individuals: 877
bin: 6.25e1
variant carriers: 321

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 56

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 28

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 65

GenotypeQuality
all individuals: 1177
bin: 9.25e1
variant carriers: 1157

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 49

GenotypeQuality
all individuals: 548
bin: 6.75e1
variant carriers: 416

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 69

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 119

GenotypeQuality
all individuals: 593
bin: 8.75e1
variant carriers: 581

GenotypeQuality
all individuals: 679
bin: 7.75e1
variant carriers: 646

Latino
type: Population
allele count: 11316
allele frequency: 9.799099411153447e-1
allele num: 11548
num of homozygotes: 5544

Other
type: Population
allele count: 870
allele frequency: 9.731543624161074e-1
allele num: 894
num of homozygotes: 425

South Asian
type: Population
allele count: 16499
allele frequency: 9.995759117896522e-1
allele num: 16506
num of homozygotes: 8246

European (Finnish)
type: Population
allele count: 6602
allele frequency: 1.0e0
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European (Non-Finnish)
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allele frequency: 9.98660537611495e-1
allele num: 65698
num of homozygotes: 32761

East Asian
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allele frequency: 9.998841788278897e-1
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African
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allele frequency: 5.530007794232268e-1
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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BaseQRankSum
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MQRankSum
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FS
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QD
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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FS
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QD
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InbreedingCoeff
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SIO_000300: 1.3e-3

BaseQRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 6
allele frequency: 9.175434303890384e-5
allele num: 65392
num of homozygotes: 0

European (Finnish)
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East Asian
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South Asian
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Other
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num of homozygotes: 0

Latino
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allele frequency: 6.965000870625109e-4
allele num: 11486
num of homozygotes: 0

African
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QD
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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ReadPosRankSum
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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QD
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FS
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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Latino
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Other
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South Asian
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East Asian
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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MQ
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ReadPosRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
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variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529894131326112e-5
allele num: 65364
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.881519e6

ReadPosRankSum
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SIO_000300: -9.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.02e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530830935031535e-5
allele num: 65324
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.34e-1

QD
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SIO_000300: 1.512e1

FS
type: SiteQuality
SIO_000300: 3.067e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

DP
type: SiteQuality
SIO_000300: 1.878001e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.83477576711251e-5
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.883e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -1.0e-3

ReadPosRankSum
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SIO_000300: -2.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.872388e6

VQSLOD
type: SiteQuality
SIO_000300: 2.64e-1

GenotypeDepth
all individuals: 273
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2691
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GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.741258741258741e-5
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 4.58e0

QD
type: SiteQuality
SIO_000300: 1.257e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.301e0

DP
type: SiteQuality
SIO_000300: 1.853505e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeDepth
all individuals: 160
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 206

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 693
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variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 191
allele frequency: 2.942354499799735e-3
allele num: 64914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.277904328018223e-3
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.948535233570863e-4
allele num: 10104
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.628351147713334e-4
allele num: 11414
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

European (Finnish)
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allele count: 4
allele frequency: 6.295247088448222e-4
allele num: 6354
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 2.86e-1

InbreedingCoeff
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SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

DP
type: SiteQuality
SIO_000300: 1.817422e6

QD
type: SiteQuality
SIO_000300: 1.361e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1649
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GenotypeQuality
all individuals: 1956
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544878727019929e-5
allele num: 64730
num of homozygotes: 0

Other
type: Population
allele count: 0
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MQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.951e1

QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.113172106128199e-3
allele num: 8518
num of homozygotes: 0

Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64656
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Latino
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DP
type: SiteQuality
SIO_000300: 1.740117e6

InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 481
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GenotypeQuality
all individuals: 6090
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.351834430856068e-4
allele num: 8504
num of homozygotes: 0

European (Finnish)
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allele count: 0
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.991238550378335e-4
allele num: 10044
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.097701505482932e-5
allele num: 64564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

FS
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ClippingRankSum
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SIO_000300: -1.98e-1

MQ
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DP
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SIO_000300: 1.715096e6

VQSLOD
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SIO_000300: 1.85e0

ReadPosRankSum
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SIO_000300: 1.11e0

InbreedingCoeff
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SIO_000300: 4.0e-4

QD
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BaseQRankSum
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SIO_000300: 2.79e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

African
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allele count: 1
allele frequency: 9.964129135113592e-5
allele num: 10036
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.648280136349551e-5
allele num: 64540
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.548994702438118e-5
allele num: 64558
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.369e1

ClippingRankSum
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SIO_000300: 1.47e0

InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -2.26e0

FS
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SIO_000300: 2.285e0

MQRankSum
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SIO_000300: 2.74e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.352e-1

MQ
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SIO_000300: 5.932e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1052
bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64456
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.824567596187787e-5
allele num: 11332
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.264e1

VQSLOD
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InbreedingCoeff
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SIO_000300: 1.7e-3

MQRankSum
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FS
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BaseQRankSum
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SIO_000300: 2.68e0

ReadPosRankSum
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SIO_000300: -7.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.664016e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.231527093596059e-4
allele num: 16240
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Latino
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allele frequency: 0.0e0
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Other
type: Population
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num of homozygotes: 0

QD
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SIO_000300: 8.550000000000001e0

FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6268
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 64364
num of homozygotes: 0

African
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South Asian
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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FS
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MQRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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European (Finnish)
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African
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South Asian
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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East Asian
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Other
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South Asian
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allele num: 16098
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63318
num of homozygotes: 0

African
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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South Asian
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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South Asian
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Other
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MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 9.057971014492754e-5
allele num: 11040
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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Other
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 222
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Finnish)
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South Asian
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Latino
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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FS
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QD
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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East Asian
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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Latino
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European (Non-Finnish)
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Other
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African
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East Asian
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South Asian
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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DP
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQRankSum
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1954
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 18866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.06075e5

BaseQRankSum
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SIO_000300: 1.07e0

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -2.04e-2

MQ
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SIO_000300: 5.983e1

ReadPosRankSum
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SIO_000300: -1.067e0

MQRankSum
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SIO_000300: -5.72e-1

QD
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SIO_000300: 1.214e1

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.185646131507986e-5
allele num: 19284
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3672
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.539e1

FS
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SIO_000300: 4.838e0

QD
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VQSLOD
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MQRankSum
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BaseQRankSum
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SIO_000300: -1.568e0

InbreedingCoeff
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SIO_000300: -1.86e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

DP
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SIO_000300: 6.19059e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

GenotypeDepth
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variant carriers: 38

GenotypeQuality
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variant carriers: 30

GenotypeQuality
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variant carriers: 42

GenotypeQuality
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variant carriers: 25

GenotypeQuality
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variant carriers: 12

GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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variant carriers: 26

GenotypeQuality
all individuals: 358
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GenotypeQuality
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bin: 9.25e1
variant carriers: 47

Other
type: Population
allele count: 5
allele frequency: 1.552795031055901e-2
allele num: 322
num of homozygotes: 0

Latino
type: Population
allele count: 35
allele frequency: 1.294378698224852e-2
allele num: 2704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 1.888930865130336e-4
allele num: 21176
num of homozygotes: 0

African
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allele count: 855
allele frequency: 1.952054794520548e-1
allele num: 4380
num of homozygotes: 70

South Asian
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allele count: 1
allele frequency: 1.037559659680432e-4
allele num: 9638
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

BaseQRankSum
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SIO_000300: -3.77e-1

FS
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 4.66e-1

DP
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SIO_000300: 6.57537e5

InbreedingCoeff
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SIO_000300: 4.81e-2

VQSLOD
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SIO_000300: 4.83e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.514e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 48

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3911
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GenotypeQuality
all individuals: 108
bin: 8.25e1
variant carriers: 3

Latino
type: Population
allele count: 4
allele frequency: 1.435750179468772e-3
allele num: 2786
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 1.002227171492205e-2
allele num: 4490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2420
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.64e0

DP
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SIO_000300: 6.65913e5

QD
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SIO_000300: 1.16e1

ClippingRankSum
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SIO_000300: 1.03e-1

MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

BaseQRankSum
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SIO_000300: 2.62e-1

FS
type: SiteQuality
SIO_000300: 1.363e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
all individuals: 378
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.186202277294039e-5
allele num: 23888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2756
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -1.204e0

MQRankSum
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ClippingRankSum
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SIO_000300: -5.29e-1

BaseQRankSum
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SIO_000300: -2.44e-1

FS
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SIO_000300: 3.282e0

ReadPosRankSum
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SIO_000300: 1.0e0

MQ
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SIO_000300: 5.491e1

DP
type: SiteQuality
SIO_000300: 7.01751e5

InbreedingCoeff
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SIO_000300: -1.13e-2

QD
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SIO_000300: 1.032e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 276
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GenotypeQuality
all individuals: 383
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.646903123345686e-4
allele num: 3778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4982
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 27066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1456
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

BaseQRankSum
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InbreedingCoeff
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SIO_000300: -9.5e-3

QD
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FS
type: SiteQuality
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DP
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MQ
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ClippingRankSum
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SIO_000300: -5.22e-1

VQSLOD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 497
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GenotypeQuality
all individuals: 36
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3328
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 27744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.539250897896357e-3
allele num: 3898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
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African
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -8.999999999999999e-3

ClippingRankSum
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MQRankSum
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FS
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DP
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MQ
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SIO_000300: 5.808e1

BaseQRankSum
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VQSLOD
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SIO_000300: -1.52e0

QD
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ReadPosRankSum
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SIO_000300: 4.71e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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East Asian
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European (Non-Finnish)
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allele num: 33508
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African
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South Asian
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MQRankSum
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SIO_000300: 4.74e-1

ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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FS
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QD
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BaseQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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African
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European (Non-Finnish)
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East Asian
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South Asian
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InbreedingCoeff
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QD
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BaseQRankSum
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MQRankSum
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MQ
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DP
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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MQ
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2786
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 41796
num of homozygotes: 0

Latino
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Other
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East Asian
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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DP
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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QD
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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Latino
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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Other
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European (Finnish)
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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MQRankSum
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DP
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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FS
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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Other
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FS
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DP
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BaseQRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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East Asian
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African
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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BaseQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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QD
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 6806
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South Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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Other
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ClippingRankSum
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DP
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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Other
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Latino
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European (Finnish)
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South Asian
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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ReadPosRankSum
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MQ
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DP
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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SIO_000300: 4.89e0

GenotypeDepth
all individuals: 16
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.737196859148079e-5
allele num: 57564
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

DP
type: SiteQuality
SIO_000300: 1.234106e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

QD
type: SiteQuality
SIO_000300: 2.111e1

BaseQRankSum
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SIO_000300: 7.0e-1

InbreedingCoeff
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SIO_000300: -2.1e-3

ClippingRankSum
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SIO_000300: 3.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.345e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

GenotypeDepth
all individuals: 538
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4662
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.588483331137172e-5
allele num: 15178
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

QD
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SIO_000300: 1.068e1

BaseQRankSum
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SIO_000300: 7.48e-1

FS
type: SiteQuality
SIO_000300: 5.447e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

InbreedingCoeff
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SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.242822e6

MQ
type: SiteQuality
SIO_000300: 5.805e1

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 1

GenotypeQuality
all individuals: 36912
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.720814977973568e-5
allele num: 58112
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.209e1

DP
type: SiteQuality
SIO_000300: 1.252189e6

VQSLOD
type: SiteQuality
SIO_000300: -1.504e0

FS
type: SiteQuality
SIO_000300: 1.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.078e0

GenotypeDepth
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bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7753
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.423485107839781e-5
allele num: 58420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.257842e6

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.48e0

FS
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SIO_000300: 2.3145e1

VQSLOD
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SIO_000300: -2.779e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 684
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variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58692
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.264222503160556e-4
allele num: 7910
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -1.7e-3

MQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.26665e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.251564455569462e-4
allele num: 7990
num of homozygotes: 0

South Asian
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allele count: 0
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Other
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.217e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.680728763992067e-5
allele num: 59498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.287952e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
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SIO_000300: 5.911e1

MQRankSum
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SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

QD
type: SiteQuality
SIO_000300: 2.467e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 33
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.251369727374744e-5
allele num: 60596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.34e0

ReadPosRankSum
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SIO_000300: 3.01e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
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SIO_000300: -6.007e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

QD
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SIO_000300: 1.555e1

MQ
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SIO_000300: 5.754e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 1.316026e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 45
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 741
bin: 7.25e1
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GenotypeQuality
all individuals: 35
bin: 9.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.63521601203519e-5
allele num: 61154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.154972236244321e-4
allele num: 15848
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.07605736068252e-5
allele num: 11018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5228
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.798e1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.764e0

FS
type: SiteQuality
SIO_000300: 9.46e-1

DP
type: SiteQuality
SIO_000300: 1.334393e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.17e-1

GenotypeDepth
all individuals: 187
bin: 4.25e1
variant carriers: 11

GenotypeDepth
all individuals: 1
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variant carriers: 1

GenotypeDepth
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 68

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3959
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GenotypeQuality
all individuals: 914
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5300
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.262574595055413e-4
allele num: 9384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.203369434416366e-4
allele num: 8310
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.255335174491589e-4
allele num: 15932
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.983769161406673e-3
allele num: 11090
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 6.66905234392791e-4
allele num: 61478
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.903e1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

FS
type: SiteQuality
SIO_000300: 1.808e0

DP
type: SiteQuality
SIO_000300: 1.34515e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.94e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeDepth
all individuals: 171
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variant carriers: 0

GenotypeDepth
all individuals: 15
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variant carriers: 0

GenotypeDepth
all individuals: 50
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4118
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608906908646266e-5
allele num: 62154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
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SIO_000300: -1.755e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

FS
type: SiteQuality
SIO_000300: 7.81e-1

DP
type: SiteQuality
SIO_000300: 1.364449e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.055e1

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 585
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GenotypeDepth
all individuals: 0
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GenotypeQuality
all individuals: 732
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 170
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 810
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 571
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.604518323599255e-5
allele num: 62324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.208095356344674e-5
allele num: 16108
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ReadPosRankSum
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SIO_000300: -2.07e-1

VQSLOD
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SIO_000300: -4.697e-1

BaseQRankSum
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SIO_000300: 4.93e-1

QD
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SIO_000300: 2.217e1

MQRankSum
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SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.368955e6

GenotypeDepth
all individuals: 7
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variant carriers: 4

GenotypeDepth
all individuals: 2
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 538
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GenotypeQuality
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GenotypeQuality
all individuals: 35
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 208
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GenotypeQuality
all individuals: 294
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variant carriers: 0

South Asian
type: Population
allele count: 26
allele frequency: 1.601774273040907e-3
allele num: 16232
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.204819277108434e-3
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.454029780193808e-4
allele num: 8462
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 57
allele frequency: 9.052504526252263e-4
allele num: 62966
num of homozygotes: 1

African
type: Population
allele count: 2
allele frequency: 2.078569943878611e-4
allele num: 9622
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.560619547801318e-4
allele num: 11234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5656
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.918e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

DP
type: SiteQuality
SIO_000300: 1.386374e6

GenotypeDepth
all individuals: 3
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variant carriers: 0

GenotypeDepth
all individuals: 0
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GenotypeDepth
all individuals: 1
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GenotypeQuality
all individuals: 838
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 583
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GenotypeQuality
all individuals: 471
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GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 2689
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GenotypeQuality
all individuals: 238
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GenotypeQuality
all individuals: 180
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GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 170
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GenotypeQuality
all individuals: 4443
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GenotypeQuality
all individuals: 450
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GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 35
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GenotypeQuality
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GenotypeQuality
all individuals: 496
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GenotypeQuality
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GenotypeQuality
all individuals: 248
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GenotypeQuality
all individuals: 336
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 7.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 1.394545e6

VQSLOD
type: SiteQuality
SIO_000300: -1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0