13-115009508-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115009508
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115009508
    reference: chr 13
allele count: 1
allele frequency: 8.336112037345782e-6
allele num: 119960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.764+44T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.767+44T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.485+44T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.485+44T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.485+44T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.767+44T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.485+44T>A
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

13-115009513-CTTACCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115009513
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115009507
    reference: chr 13
allele count: 2
allele frequency: 1.671067143477825e-5
allele num: 119684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.485+50_485+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.485+50_485+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.764+50_764+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.485+50_485+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.767+50_767+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.485+50_485+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.767+50_767+55delTTACCT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8998
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4427
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3987
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: CTTACCT
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

13-115009515-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115009515
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115009515
    reference: chr 13
allele count: 1
allele frequency: 8.354358468813179e-6
allele num: 119698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.485+51T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.764+51T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.485+51T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.485+51T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.767+51T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.767+51T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.485+51T>C
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10341
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24349
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4559
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

13-115009953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115009953
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115009953
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-412C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-412C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-412C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-412C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-412C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-412C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-412C>T
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2007
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

13-115010026-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010026
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010026
    reference: chr 13
allele count: 1
allele frequency: 4.166666666666666e-2
allele num: 24
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-339G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-339G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-339G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-339G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-339G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-339G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000264539
  ensembl transcript: ENST00000582191
  gene symbol: MIR548AR
  hgvsc: ENST00000582191.1:n.47G>A
  variant of: http://identifiers.org/hgnc/43455
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-339G>A
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3374
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

13-115010041-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010041
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010041
    reference: chr 13
allele count: 2
allele frequency: 7.692307692307693e-2
allele num: 26
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-324A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-324A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.5A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-324A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-324A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-324A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-324A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-324A>G
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3599
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

13-115010323-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010323
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010323
    reference: chr 13
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-42C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-42C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-42C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.287C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-42C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-42C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-42C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-42C>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6314
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

13-115010330-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010330
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010331
    reference: chr 13
allele count: 3
allele frequency: 2.476269087907552e-5
allele num: 121150
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-32dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-32dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-32dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-32dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.297dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-32dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-32dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-32dupT
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22072
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

13-115010330-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010330
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010330
    reference: chr 13
allele count: 23735
allele frequency: 1.959141560049525e-1
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.294G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-35G>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 4.75e1
  variant carriers: 913
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.75e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.75e1
  variant carriers: 1543
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 3.75e1
  variant carriers: 554
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 4.25e1
  variant carriers: 670
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 1351
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.25e1
  variant carriers: 943
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 5.25e1
  variant carriers: 1091
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 3.25e1
  variant carriers: 601
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 7.25e1
  variant carriers: 1526
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 2.25e1
  variant carriers: 503
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 6.75e1
  variant carriers: 1614
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 8.75e1
  variant carriers: 1147
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17846
  bin: 2.75e1
  variant carriers: 636
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 9.75e1
  variant carriers: 4389
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 5.75e1
  variant carriers: 1280
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 6.25e1
  variant carriers: 1473
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 9.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 3187
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

13-115010331-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010331
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010331
    reference: chr 13
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-34T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-34T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-34T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-34T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-34T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.295T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-34T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-34T>G
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9067
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41977
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

13-115010334-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010334
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010334
    reference: chr 13
allele count: 23
allele frequency: 1.897908999389368e-4
allele num: 121186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-31G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-31G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-31G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-31G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-31G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.298G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-31G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-31G>A
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26243
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42191
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2882
  bin: 9.75e1
  variant carriers: 23
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

13-115010335-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010335
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010335
    reference: chr 13
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-30G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.299G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-30G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-30G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-30G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-30G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-30G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-30G>C
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 42296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

13-115010338-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010338
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010338
    reference: chr 13
allele count: 2
allele frequency: 1.650137786505173e-5
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-27G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-27G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-27G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-27G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.302G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-27G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-27G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-27G>A
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2855
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

13-115010338-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010338
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010338
    reference: chr 13
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-27G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-27G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-27G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-27G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.302G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-27G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-27G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-27G>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

13-115010341-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010341
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010341
    reference: chr 13
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-24G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-24G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-24G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.305G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-24G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-24G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-24G>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-24G>C
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2852
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

13-115010342-T-TAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010342
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010344
    reference: chr 13
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: TAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-22_486-21dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-22_486-21dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-22_765-21dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-22_768-21dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.307_308dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-22_486-21dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-22_486-21dupAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-22_768-21dupAA
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42646
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

13-115010346-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010346
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010346
    reference: chr 13
allele count: 6
allele frequency: 4.949025042066713e-5
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-19G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-19G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-19G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.310G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-19G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-19G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-19G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-19G>A
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42803
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

13-115010347-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010347
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010347
    reference: chr 13
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-18T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-18T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-18T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-18T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-18T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.311T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-18T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-18T>A
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9095
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

13-115010350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010350
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010350
    reference: chr 13
allele count: 1
allele frequency: 8.248919391559706e-6
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-15C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-15C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-15C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.314C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-15C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-15C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-15C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-15C>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

13-115010351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010351
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010351
    reference: chr 13
allele count: 25
allele frequency: 2.061753645180445e-4
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-14G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-14G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-14G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-14G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-14G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-14G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.315G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-14G>A
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16945
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43038
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

13-115010359-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010359
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010359
    reference: chr 13
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-6T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-6T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-6T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-6T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-6T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-6T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.323T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-6T>G
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: c.768-6T>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

13-115010361-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010361
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010360
    reference: chr 13
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.326delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486-3delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486-3delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768-3delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765-3delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486-3delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768-3delC
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486-3delC
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: c.768-3delC
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: TC
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

13-115010365-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010365
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010365
    reference: chr 13
allele count: 5
allele frequency: 4.121128200056047e-5
allele num: 121326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.486A>G
  hgvsp: ENST00000375310.1:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.486A>G
  hgvsp: ENST00000252458.6:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.768A>G
  hgvsp: ENST00000356221.3:c.768A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.765A>G
  hgvsp: ENST00000252457.5:c.765A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.486A>G
  hgvsp: ENST00000375308.1:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.486A>G
  hgvsp: ENST00000375312.3:c.486A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.768A>G
  hgvsp: ENST00000360383.3:c.768A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.329A>G
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: c.768A>G
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ

13-115010370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010370
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010370
    reference: chr 13
allele count: 32
allele frequency: 2.637174267772082e-4
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.334T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.491T>C
  hgvsp: ENSP00000364457.1:p.Met164Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.491T>C
  hgvsp: ENSP00000252458.6:p.Met164Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.491T>C
  hgvsp: ENSP00000364459.1:p.Met164Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.491T>C
  hgvsp: ENSP00000364461.3:p.Met164Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.770T>C
  hgvsp: ENSP00000252457.5:p.Met257Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.773T>C
  hgvsp: ENSP00000348554.3:p.Met258Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.773T>C
  hgvsp: ENSP00000353549.3:p.Met258Thr
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26630
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16983
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met258Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

13-115010379-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010379
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010379
    reference: chr 13
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.500A>T
  hgvsp: ENSP00000364461.3:p.Asp167Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.782A>T
  hgvsp: ENSP00000348554.3:p.Asp261Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.500A>T
  hgvsp: ENSP00000364459.1:p.Asp167Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.500A>T
  hgvsp: ENSP00000252458.6:p.Asp167Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.779A>T
  hgvsp: ENSP00000252457.5:p.Asp260Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.782A>T
  hgvsp: ENSP00000353549.3:p.Asp261Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.500A>T
  hgvsp: ENSP00000364457.1:p.Asp167Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.343A>T
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9137
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp261Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/13-115010381-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010381
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010381
    reference: chr 13
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.502C>A
  hgvsp: ENSP00000364459.1:p.Pro168Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.502C>A
  hgvsp: ENSP00000252458.6:p.Pro168Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.502C>A
  hgvsp: ENSP00000364457.1:p.Pro168Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.784C>A
  hgvsp: ENSP00000348554.3:p.Pro262Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.784C>A
  hgvsp: ENSP00000353549.3:p.Pro262Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.781C>A
  hgvsp: ENSP00000252457.5:p.Pro261Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.502C>A
  hgvsp: ENSP00000364461.3:p.Pro168Thr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.345C>A
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43368
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro262Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

13-115010389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010389
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010389
    reference: chr 13
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.792T>C
  hgvsp: ENST00000360383.3:c.792T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.789T>C
  hgvsp: ENST00000252457.5:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.353T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.510T>C
  hgvsp: ENST00000375308.1:c.510T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.510T>C
  hgvsp: ENST00000375310.1:c.510T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.510T>C
  hgvsp: ENST00000375312.3:c.510T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.792T>C
  hgvsp: ENST00000356221.3:c.792T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.510T>C
  hgvsp: ENST00000252458.6:c.510T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His264His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

13-115010392-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010392
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010392
    reference: chr 13
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.795A>G
  hgvsp: ENST00000356221.3:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.795A>G
  hgvsp: ENST00000360383.3:c.795A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.792A>G
  hgvsp: ENST00000252457.5:c.792A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.513A>G
  hgvsp: ENST00000375308.1:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.513A>G
  hgvsp: ENST00000252458.6:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.513A>G
  hgvsp: ENST00000375312.3:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.513A>G
  hgvsp: ENST00000375310.1:c.513A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.356A>G
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala265Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

13-115010396-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010396
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010396
    reference: chr 13
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.796T>A
  hgvsp: ENSP00000252457.5:p.Cys266Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.517T>A
  hgvsp: ENSP00000252458.6:p.Cys173Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.517T>A
  hgvsp: ENSP00000364459.1:p.Cys173Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.360T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.799T>A
  hgvsp: ENSP00000348554.3:p.Cys267Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.517T>A
  hgvsp: ENSP00000364461.3:p.Cys173Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.799T>A
  hgvsp: ENSP00000353549.3:p.Cys267Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.517T>A
  hgvsp: ENSP00000364457.1:p.Cys173Ser
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys267Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

13-115010396-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010396
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010396
    reference: chr 13
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.796T>C
  hgvsp: ENSP00000252457.5:p.Cys266Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.517T>C
  hgvsp: ENSP00000364457.1:p.Cys173Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.517T>C
  hgvsp: ENSP00000364459.1:p.Cys173Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.517T>C
  hgvsp: ENSP00000364461.3:p.Cys173Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.517T>C
  hgvsp: ENSP00000252458.6:p.Cys173Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.360T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.799T>C
  hgvsp: ENSP00000353549.3:p.Cys267Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.799T>C
  hgvsp: ENSP00000348554.3:p.Cys267Arg
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys267Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD

13-115010408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010408
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010408
    reference: chr 13
allele count: 3
allele frequency: 2.472147142197904e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.811C>T
  hgvsp: ENSP00000348554.3:p.His271Tyr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.529C>T
  hgvsp: ENSP00000364461.3:p.His177Tyr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.529C>T
  hgvsp: ENSP00000364457.1:p.His177Tyr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.529C>T
  hgvsp: ENSP00000364459.1:p.His177Tyr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.372C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.808C>T
  hgvsp: ENSP00000252457.5:p.His270Tyr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.811C>T
  hgvsp: ENSP00000353549.3:p.His271Tyr
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.529C>T
  hgvsp: ENSP00000252458.6:p.His177Tyr
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His271Tyr
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

13-115010409-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010409
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010409
    reference: chr 13
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.373A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.530A>G
  hgvsp: ENSP00000364459.1:p.His177Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.812A>G
  hgvsp: ENSP00000348554.3:p.His271Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.530A>G
  hgvsp: ENSP00000364461.3:p.His177Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.812A>G
  hgvsp: ENSP00000353549.3:p.His271Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.809A>G
  hgvsp: ENSP00000252457.5:p.His270Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.530A>G
  hgvsp: ENSP00000252458.6:p.His177Arg
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.530A>G
  hgvsp: ENSP00000364457.1:p.His177Arg
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His271Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

13-115010418-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010418
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010418
    reference: chr 13
allele count: 2
allele frequency: 1.648396933981703e-5
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.382C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.539C>T
  hgvsp: ENSP00000252458.6:p.Thr180Met
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.821C>T
  hgvsp: ENSP00000348554.3:p.Thr274Met
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.539C>T
  hgvsp: ENSP00000364461.3:p.Thr180Met
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.539C>T
  hgvsp: ENSP00000364457.1:p.Thr180Met
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.821C>T
  hgvsp: ENSP00000353549.3:p.Thr274Met
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.539C>T
  hgvsp: ENSP00000364459.1:p.Thr180Met
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.818C>T
  hgvsp: ENSP00000252457.5:p.Thr273Met
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr274Met
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

13-115010431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010431
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010431
    reference: chr 13
allele count: 5
allele frequency: 4.125821038386639e-5
allele num: 121188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.552G>A
  hgvsp: ENST00000375308.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.395G>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.552G>A
  hgvsp: ENST00000252458.6:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.552G>A
  hgvsp: ENST00000375312.3:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.552G>A
  hgvsp: ENST00000375310.1:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.831G>A
  hgvsp: ENST00000252457.5:c.831G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.834G>A
  hgvsp: ENST00000360383.3:c.834G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.834G>A
  hgvsp: ENST00000356221.3:c.834G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu278Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/13-115010432-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010432
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010432
    reference: chr 13
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.553A>C
  hgvsp: ENSP00000364457.1:p.Asn185His
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.553A>C
  hgvsp: ENSP00000364459.1:p.Asn185His
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.835A>C
  hgvsp: ENSP00000348554.3:p.Asn279His
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.553A>C
  hgvsp: ENSP00000252458.6:p.Asn185His
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.832A>C
  hgvsp: ENSP00000252457.5:p.Asn278His
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.396A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.835A>C
  hgvsp: ENSP00000353549.3:p.Asn279His
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.553A>C
  hgvsp: ENSP00000364461.3:p.Asn185His
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn279His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

13-115010433-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010433
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010433
    reference: chr 13
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.836A>G
  hgvsp: ENSP00000353549.3:p.Asn279Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.397A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.833A>G
  hgvsp: ENSP00000252457.5:p.Asn278Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.554A>G
  hgvsp: ENSP00000252458.6:p.Asn185Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.554A>G
  hgvsp: ENSP00000364461.3:p.Asn185Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.554A>G
  hgvsp: ENSP00000364457.1:p.Asn185Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.554A>G
  hgvsp: ENSP00000364459.1:p.Asn185Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.836A>G
  hgvsp: ENSP00000348554.3:p.Asn279Ser
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn279Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/13-115010448-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010448
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010448
    reference: chr 13
allele count: 1
allele frequency: 8.37408722449253e-6
allele num: 119416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+4A>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+4A>C
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40964
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 9.75e1
  variant carriers: 1
hgvs: c.847+4A>C
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

13-115010451-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010451
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010452
    reference: chr 13
allele count: 2
allele frequency: 1.693021365929638e-5
allele num: 118132
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+15dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+15dupT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 8.25e1
  variant carriers: 0
hgvs: c.847+15dupT
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

13-115010454-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010454
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010454
    reference: chr 13
allele count: 1
allele frequency: 8.514986376021799e-6
allele num: 117440
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+10T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+10T>C
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25418
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4772
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39056
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

13-115010455-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010455
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010455
    reference: chr 13
allele count: 211
allele frequency: 1.79672332163902e-3
allele num: 117436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+11T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+11T>A
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14468
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25437
  bin: 2.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

13-115010459-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010459
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010459
    reference: chr 13
allele count: 5
allele frequency: 4.340277777777778e-5
allele num: 115200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+15T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+15T>A
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12026
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

13-115010463-TTAAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010463
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010458
    reference: chr 13
allele count: 5
allele frequency: 4.363687141086733e-5
allele num: 114582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+23_565+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+23_847+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+23_844+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+23_565+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+23_565+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+23_565+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+23_847+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+23_408+27delAGTAA
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10890
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2550
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: TTAAAG
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

13-115010472-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010472
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010472
    reference: chr 13
allele count: 1
allele frequency: 8.89157612078317e-6
allele num: 112466
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+28T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+28T>C
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3788
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5168
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

13-115010482-TAAAAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115010482
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115010477
    reference: chr 13
allele count: 4
allele frequency: 3.651167460795589e-5
allele num: 109554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.565+42_565+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.565+42_565+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.847+42_847+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.844+42_844+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.565+42_565+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.565+42_565+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.847+42_847+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.408+42_408+46delACAAA
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14056
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: TAAAAC
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

13-115011431-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011431
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011431
    reference: chr 13
allele count: 1
allele frequency: 1.42304189435337e-5
allele num: 70272
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.214A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-44A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-44A>G
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13920
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

13-115011432-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011432
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011432
    reference: chr 13
allele count: 1
allele frequency: 1.420615979088533e-5
allele num: 70392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-43T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.215T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-43T>C
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17512
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

13-115011439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011439
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011439
    reference: chr 13
allele count: 5
allele frequency: 7.084762093688894e-5
allele num: 70574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.222C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-36C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-36C>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13604
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-115011440-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011440
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011440
    reference: chr 13
allele count: 4
allele frequency: 5.639839828548869e-5
allele num: 70924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.223G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-35G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-35G>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13407
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2002
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

13-115011445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011445
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011445
    reference: chr 13
allele count: 4
allele frequency: 5.550775720906997e-5
allele num: 72062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.228A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-30A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-30A>G
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21156
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4691
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3622
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

13-115011457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011457
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011457
    reference: chr 13
allele count: 3
allele frequency: 4.031499449028409e-5
allele num: 74414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.240C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-18C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-18C>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16849
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

13-115011466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011466
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011466
    reference: chr 13
allele count: 1
allele frequency: 1.274989800081599e-5
allele num: 78432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.566-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.409-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.249C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.566-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.566-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.845-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.848-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.848-9C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.566-9C>T
  variant of: http://identifiers.org/hgnc/1720
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3620
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

13-115011480-TTCTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011480
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011476
    reference: chr 13
allele count: 1
allele frequency: 1.193260464894277e-5
allele num: 83804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.575_578delATCT
  hgvsp: ENSP00000252458.6:p.Tyr192PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.857_860delATCT
  hgvsp: ENSP00000348554.3:p.Tyr286PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.857_860delATCT
  hgvsp: ENSP00000353549.3:p.Tyr286PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.267_270delATCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.854_857delATCT
  hgvsp: ENSP00000252457.5:p.Tyr285PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.575_578delATCT
  hgvsp: ENSP00000364459.1:p.Tyr192PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.575_578delATCT
  hgvsp: ENSP00000364457.1:p.Tyr192PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.418_421delATCT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.575_578delATCT
  hgvsp: ENSP00000364461.3:p.Tyr192PhefsTer52
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20536
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr286PhefsTer52
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: TTCTA
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-115011481-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011481
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011481
    reference: chr 13
allele count: 1
allele frequency: 1.189711376020178e-5
allele num: 84054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.572T>C
  hgvsp: ENSP00000364457.1:p.Phe191Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.851T>C
  hgvsp: ENSP00000252457.5:p.Phe284Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.572T>C
  hgvsp: ENSP00000252458.6:p.Phe191Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.415T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.572T>C
  hgvsp: ENSP00000364459.1:p.Phe191Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.572T>C
  hgvsp: ENSP00000364461.3:p.Phe191Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.264T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.854T>C
  hgvsp: ENSP00000353549.3:p.Phe285Ser
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.854T>C
  hgvsp: ENSP00000348554.3:p.Phe285Ser
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe285Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

13-115011482-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011482
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011482
    reference: chr 13
allele count: 1
allele frequency: 1.18654927739149e-5
allele num: 84278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.852C>T
  hgvsp: ENST00000252457.5:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.855C>T
  hgvsp: ENST00000360383.3:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.855C>T
  hgvsp: ENST00000356221.3:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.573C>T
  hgvsp: ENST00000375310.1:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.573C>T
  hgvsp: ENST00000375312.3:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.573C>T
  hgvsp: ENST00000252458.6:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.416C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.265C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.573C>T
  hgvsp: ENST00000375308.1:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe285Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

13-115011486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011486
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011486
    reference: chr 13
allele count: 3
allele frequency: 3.512633772802847e-5
allele num: 85406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.577C>T
  hgvsp: ENSP00000252458.6:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.577C>T
  hgvsp: ENSP00000364459.1:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.859C>T
  hgvsp: ENSP00000353549.3:p.Leu287Phe
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.269C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.577C>T
  hgvsp: ENSP00000364457.1:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.856C>T
  hgvsp: ENSP00000252457.5:p.Leu286Phe
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.577C>T
  hgvsp: ENSP00000364461.3:p.Leu193Phe
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.420C>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.859C>T
  hgvsp: ENSP00000348554.3:p.Leu287Phe
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21584
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu287Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

13-115011507-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011507
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011507
    reference: chr 13
allele count: 1
allele frequency: 1.149980450332344e-5
allele num: 86958
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.880T>G
  hgvsp: ENSP00000353549.3:p.Leu294Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.290T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.598T>G
  hgvsp: ENSP00000252458.6:p.Leu200Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.598T>G
  hgvsp: ENSP00000364457.1:p.Leu200Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.598T>G
  hgvsp: ENSP00000364461.3:p.Leu200Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.880T>G
  hgvsp: ENSP00000348554.3:p.Leu294Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.877T>G
  hgvsp: ENSP00000252457.5:p.Leu293Val
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.441T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.598T>G
  hgvsp: ENSP00000364459.1:p.Leu200Val
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu294Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

13-115011512-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011512
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011512
    reference: chr 13
allele count: 1
allele frequency: 1.156845052173712e-5
allele num: 86442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.882T>C
  hgvsp: ENST00000252457.5:c.882T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.603T>C
  hgvsp: ENST00000375312.3:c.603T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.603T>C
  hgvsp: ENST00000375308.1:c.603T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.885T>C
  hgvsp: ENST00000360383.3:c.885T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.603T>C
  hgvsp: ENST00000375310.1:c.603T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.295T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.446T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.603T>C
  hgvsp: ENST00000252458.6:c.603T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.885T>C
  hgvsp: ENST00000356221.3:c.885T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13852
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr295Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

13-115011524-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011524
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011524
    reference: chr 13
allele count: 1
allele frequency: 1.163683757302116e-5
allele num: 85934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615T>A
  hgvsp: ENST00000375308.1:c.615T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897T>A
  hgvsp: ENST00000356221.3:c.897T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307T>A
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615T>A
  hgvsp: ENST00000375312.3:c.615T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897T>A
  hgvsp: ENST00000360383.3:c.897T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615T>A
  hgvsp: ENST00000252458.6:c.615T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894T>A
  hgvsp: ENST00000252457.5:c.894T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615T>A
  hgvsp: ENST00000375310.1:c.615T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3152
  bin: 7.5e0
  variant carriers: 0
hgvs: c.897T>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

13-115011534-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011534
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011534
    reference: chr 13
allele count: 53
allele frequency: 6.381697772426249e-4
allele num: 83050
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+10A>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+10A>G
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8765
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15148
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1525
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

13-115011535-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011535
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011535
    reference: chr 13
allele count: 1
allele frequency: 1.22555027207216e-5
allele num: 81596
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+11T>C
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+11T>C
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6654
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3600
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

13-115011538-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011538
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011538
    reference: chr 13
allele count: 0
allele frequency: 0.0e0
allele num: 79326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+14C>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+14C>G
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4728
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

13-115011540-TTTAGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011540
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011534
    reference: chr 13
allele count: 3
allele frequency: 3.742888511827528e-5
allele num: 80152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+22_615+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+22_615+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+22_307+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+22_897+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+22_897+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+22_615+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+22_615+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+22_894+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+22_458+27delCTTAGT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5842
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21773
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4214
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: TTTAGTC
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

13-115011544-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011544
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011544
    reference: chr 13
allele count: 3
allele frequency: 3.993184964327548e-5
allele num: 75128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+20G>T
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+20G>T
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16109
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3603
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8752
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

13-115011549-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011549
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011548
    reference: chr 13
allele count: 7
allele frequency: 1.04602510460251e-4
allele num: 66920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+26delG
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+26delG
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15012
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5066
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4387
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4866
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: AG
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

13-115011550-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011551
    reference: chr 13
allele count: 4609
allele frequency: 1.368874368874369e-1
allele num: 33670
alternate allele: GT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+39dupT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+39dupT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 846
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 1.75e1
  variant carriers: 1422
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 1.25e1
  variant carriers: 1805
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.5e0
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 406
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 7.5e0
  variant carriers: 1433
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 3.25e1
  variant carriers: 360
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 476
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 2.75e1
  variant carriers: 283
genotype quality: GenotypeQuality
  all individuals: 27982
  bin: 2.5e0
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 145
num of homozygotes: 11
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

13-115011550-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011552
    reference: chr 13
allele count: 101
allele frequency: 2.999702999703e-3
allele num: 33670
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+38_897+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+38_615+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+38_615+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+38_458+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+38_615+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+38_897+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+38_307+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+38_615+39dupTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+38_894+39dupTT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 1.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 7.5e0
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 27982
  bin: 2.5e0
  variant carriers: 28
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

13-115011550-G-GTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011553
    reference: chr 13
allele count: 8
allele frequency: 2.376002376002376e-4
allele num: 33670
alternate allele: GTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+37_897+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+37_894+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+37_615+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+37_307+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+37_615+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+37_615+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+37_897+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+37_458+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+37_615+39dupTTT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27982
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 3.25e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

13-115011550-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
allele count: 98
allele frequency: 2.910602910602911e-3
allele num: 33670
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 7.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5412
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27982
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5821
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 9.75e1
  variant carriers: 84
num of homozygotes: 1
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2100
  num of homozygotes: 0
population: African
  type: Population
  allele count: 92
  allele frequency: 2.130616025937934e-2
  allele num: 4318
  num of homozygotes: 1
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6410
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2272
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

13-115011550-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011549
    reference: chr 13
allele count: 4202
allele frequency: 1.247995247995248e-1
allele num: 33670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+39delT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+39delT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 1.25e1
  variant carriers: 1284
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.5e0
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 7.5e0
  variant carriers: 631
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 353
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 1.75e1
  variant carriers: 1119
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 734
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 426
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 9.75e1
  variant carriers: 1167
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 3.75e1
  variant carriers: 387
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 179
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.75e1
  variant carriers: 379
genotype quality: GenotypeQuality
  all individuals: 5412
  bin: 2.25e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.25e1
  variant carriers: 382
num of homozygotes: 17
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: GT
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

13-115011550-GTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011548
    reference: chr 13
allele count: 26
allele frequency: 7.722007722007722e-4
allele num: 33670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+38_615+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+38_615+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+38_897+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+38_615+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+38_458+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+38_894+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+38_615+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+38_307+39delTT
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+38_897+39delTT
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16713
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16345
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27982
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5412
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: GTT
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

13-115011553-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 115011553
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 115011553
    reference: chr 13
allele count: 5
allele frequency: 7.616146230007616e-5
allele num: 65650
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000353549
  ensembl transcript: ENST00000360383
  gene symbol: CDC16
  hgvsc: ENST00000360383.3:c.897+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364459
  ensembl transcript: ENST00000375310
  gene symbol: CDC16
  hgvsc: ENST00000375310.1:c.615+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000494581
  gene symbol: CDC16
  hgvsc: ENST00000494581.1:n.307+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364457
  ensembl transcript: ENST00000375308
  gene symbol: CDC16
  hgvsc: ENST00000375308.1:c.615+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000364461
  ensembl transcript: ENST00000375312
  gene symbol: CDC16
  hgvsc: ENST00000375312.3:c.615+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252458
  ensembl transcript: ENST00000252458
  gene symbol: CDC16
  hgvsc: ENST00000252458.6:c.615+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl transcript: ENST00000484907
  gene symbol: CDC16
  hgvsc: ENST00000484907.1:n.458+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000348554
  ensembl transcript: ENST00000356221
  gene symbol: CDC16
  hgvsc: ENST00000356221.3:c.897+29T>G
  variant of: http://identifiers.org/hgnc/1720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000130177
  ensembl protein: ENSP00000252457
  ensembl transcript: ENST00000252457
  gene symbol: CDC16
  hgvsc: ENST00000252457.5:c.894+29T>G
  variant of: http://identifiers.org/hgnc/1720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 1
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4425
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4556
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.402868485081316e-5
allele num: 15618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.345024e6

FS
type: SiteQuality
SIO_000300: 4.244e0

VQSLOD
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.96e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
all individuals: 890
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8028
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24350
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1059
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4553
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021148036253776e-5
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Other
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: NaN
allele num: 0
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European (Finnish)
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allele frequency: NaN
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African
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allele frequency: NaN
allele num: 0
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Other
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.129e-1

QD
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MQRankSum
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FS
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DP
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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allele frequency: 0.0e0
allele num: 2
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European (Finnish)
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allele num: 0
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South Asian
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allele frequency: NaN
allele num: 0
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African
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allele frequency: 8.333333333333333e-2
allele num: 12
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.03e-1

FS
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MQ
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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QD
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SIO_000300: 1.058e1

DP
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SIO_000300: 9.144e3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Latino
type: Population
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allele frequency: 5.0e-1
allele num: 4
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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South Asian
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allele frequency: NaN
allele num: 0
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East Asian
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allele count: 0
allele frequency: NaN
allele num: 0
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VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

BaseQRankSum
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SIO_000300: 2.0e0

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
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FS
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SIO_000300: 0.0e0

DP
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SIO_000300: 1.0336e4

QD
type: SiteQuality
SIO_000300: 1.891e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.53e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 6.126700159294204e-5
allele num: 16322
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66578
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Other
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allele num: 902
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

DP
type: SiteQuality
SIO_000300: 2.593244e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16404
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8652
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Other
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.503828254015913e-5
allele num: 66610
num of homozygotes: 0

African
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.346e0

GenotypeQuality
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

South Asian
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allele frequency: 2.220190197512802e-1
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Other
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Latino
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allele num: 11562
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European (Non-Finnish)
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allele num: 66610
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European (Finnish)
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allele frequency: 1.291200483822195e-1
allele num: 6614
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East Asian
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African
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allele frequency: 5.416106092638863e-1
allele num: 10406
num of homozygotes: 1529

DP
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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Other
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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MQ
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ClippingRankSum
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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QD
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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African
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Other
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European (Finnish)
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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MQRankSum
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SIO_000300: 4.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.174e0

QD
type: SiteQuality
SIO_000300: 1.238e1

DP
type: SiteQuality
SIO_000300: 1.864271e6

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9072
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.384e0

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

QD
type: SiteQuality
SIO_000300: 1.941e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.8634e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

FS
type: SiteQuality
SIO_000300: 6.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.908e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

FS
type: SiteQuality
SIO_000300: 1.923e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

DP
type: SiteQuality
SIO_000300: 1.863993e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.756e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 363
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variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

FS
type: SiteQuality
SIO_000300: 1.923e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

DP
type: SiteQuality
SIO_000300: 1.863993e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.756e0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1805
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 361
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
SIO_000300: 5.346e0

QD
type: SiteQuality
SIO_000300: 1.216e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.865012e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2851
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1807
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variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.756e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.998e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

DP
type: SiteQuality
SIO_000300: 1.865389e6

QD
type: SiteQuality
SIO_000300: 1.365e1

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
all individuals: 936
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.806767929244376e-4
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.471e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.866596e6

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

QD
type: SiteQuality
SIO_000300: 1.1e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.8665e6

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 4.395e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 904
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East Asian
type: Population
allele count: 0
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allele num: 8654
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VQSLOD
type: SiteQuality
SIO_000300: 3.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

FS
type: SiteQuality
SIO_000300: 6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.81e0

DP
type: SiteQuality
SIO_000300: 1.867788e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 25

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 22
allele frequency: 2.114977888867526e-3
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499910001799964e-5
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 904
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.868799e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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FS
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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SIO_000300: 5.982e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Other
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allele count: 0
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ClippingRankSum
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QD
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DP
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InbreedingCoeff
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MQ
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.285e0

ReadPosRankSum
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SIO_000300: -6.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
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European (Non-Finnish)
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allele count: 5
allele frequency: 7.496476655971693e-5
allele num: 66698
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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QD
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 24
allele frequency: 3.598093010704327e-4
allele num: 66702
num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.425712553062462e-4
allele num: 16490
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FS
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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SIO_000300: 1.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 1.870858e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66710
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South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQRankSum
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SIO_000300: -6.08e-1

VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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MQ
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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allele num: 66710
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African
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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South Asian
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Other
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African
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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QD
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FS
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66720
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East Asian
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European (Finnish)
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South Asian
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African
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Other
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Latino
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BaseQRankSum
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MQRankSum
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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QD
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DP
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66720
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Latino
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European (Finnish)
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East Asian
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African
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.288e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.1e-1

FS
type: SiteQuality
SIO_000300: 4.02e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e0

DP
type: SiteQuality
SIO_000300: 1.870118e6

InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -2.153e0

MQRankSum
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SIO_000300: 2.04e0

BaseQRankSum
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SIO_000300: 1.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.1e-1

MQRankSum
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MQ
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SIO_000300: 5.942e1

DP
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.02e-1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99805126667666e-5
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.869491e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

DP
type: SiteQuality
SIO_000300: 1.869258e6

FS
type: SiteQuality
SIO_000300: 4.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

QD
type: SiteQuality
SIO_000300: 1.474e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.734e0

VQSLOD
type: SiteQuality
SIO_000300: -1.902e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.386e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.58e-1

DP
type: SiteQuality
SIO_000300: 1.868524e6

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001831116981359e-5
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.947e1

FS
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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DP
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SIO_000300: 1.865548e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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InbreedingCoeff
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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African
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

East Asian
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QD
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 8.750437521876094e-5
allele num: 11428
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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South Asian
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.082234003205523e-5
allele num: 64888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.631e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 8.76e-1

DP
type: SiteQuality
SIO_000300: 1.78505e6

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7692
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 684
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.531862745098039e-4
allele num: 6528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

VQSLOD
type: SiteQuality
SIO_000300: -1.775e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 1.731926e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

FS
type: SiteQuality
SIO_000300: 7.768e0

QD
type: SiteQuality
SIO_000300: 2.404e1

MQRankSum
type: SiteQuality
SIO_000300: 6.59e-1

GenotypeQuality
all individuals: 7663
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2754
bin: 9.75e1
variant carriers: 210

GenotypeQuality
all individuals: 4775
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 25
allele frequency: 2.217098261794963e-3
allele num: 11276
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 57
allele frequency: 3.541692556232136e-3
allele num: 16094
num of homozygotes: 1

African
type: Population
allele count: 6
allele frequency: 6.004803843074459e-4
allele num: 9992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 122
allele frequency: 1.895233952650221e-3
allele num: 64372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.367e1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

DP
type: SiteQuality
SIO_000300: 1.731608e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.163e0

GenotypeQuality
all individuals: 1642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2551
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1585
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8405
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.300403225806451e-5
allele num: 15872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.353038340586386e-5
allele num: 62962
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

FS
type: SiteQuality
SIO_000300: 6.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

DP
type: SiteQuality
SIO_000300: 1.612571e6

GenotypeQuality
all individuals: 332
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9475
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.986454972366865e-5
allele num: 62606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQ
type: SiteQuality
SIO_000300: 5.045e1

FS
type: SiteQuality
SIO_000300: 3.201e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.599e0

QD
type: SiteQuality
SIO_000300: 1.136e1

DP
type: SiteQuality
SIO_000300: 1.569303e6

GenotypeQuality
all individuals: 3294
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2706
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13439
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61310
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.275835672365399e-4
allele num: 7838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.512e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.371411e6

QD
type: SiteQuality
SIO_000300: 1.307e1

GenotypeQuality
all individuals: 5573
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7995
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13968
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6304
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.083893344894862e-4
allele num: 9226
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.471654154801968e-5
allele num: 15452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.680672268907563e-5
allele num: 59500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.407337723424271e-5
allele num: 10630
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.142e1

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e0

DP
type: SiteQuality
SIO_000300: 1.232268e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.586e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

GenotypeQuality
all individuals: 3621
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5272
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16853
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3702
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.285677552069941e-4
allele num: 7778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12240
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.8e-2

DP
type: SiteQuality
SIO_000300: 1.258866e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

MQ
type: SiteQuality
SIO_000300: 5.643e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

QD
type: SiteQuality
SIO_000300: 1.672e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

GenotypeQuality
all individuals: 3971
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8529
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3623
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.854695974878676e-5
allele num: 35030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5284
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

FS
type: SiteQuality
SIO_000300: 2.243e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

VQSLOD
type: SiteQuality
SIO_000300: -8.242e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.37e-1

DP
type: SiteQuality
SIO_000300: 1.261397e6

QD
type: SiteQuality
SIO_000300: 1.178e1

GenotypeQuality
all individuals: 19493
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1196
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5069
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3626
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 526
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.136557367733136e-4
allele num: 35194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.892505677517033e-4
allele num: 5284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 6.133e0

QD
type: SiteQuality
SIO_000300: 1.169e1

DP
type: SiteQuality
SIO_000300: 1.28377e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5100
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.672240802675585e-3
allele num: 598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.831096766887492e-5
allele num: 35322
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.626809825931349e-4
allele num: 12294
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.37e0

VQSLOD
type: SiteQuality
SIO_000300: -3.784e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.290694e6

GenotypeQuality
all individuals: 2900
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.112656467315716e-4
allele num: 35950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

DP
type: SiteQuality
SIO_000300: 1.31421e6

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.25e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 642
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.298481102084069e-4
allele num: 5662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37280
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.575e0

MQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.372654e6

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2325
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GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.068680182043856e-4
allele num: 4834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12922
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.87e1

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

FS
type: SiteQuality
SIO_000300: 1.862e0

QD
type: SiteQuality
SIO_000300: 1.298e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.557e0

VQSLOD
type: SiteQuality
SIO_000300: -1.044e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

DP
type: SiteQuality
SIO_000300: 1.433117e6

GenotypeQuality
all individuals: 25937
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 593
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.351723813555336e-5
allele num: 42522
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.874e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.05e0

QD
type: SiteQuality
SIO_000300: 1.043e1

MQRankSum
type: SiteQuality
SIO_000300: -7.38e-1

DP
type: SiteQuality
SIO_000300: 1.493119e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.344226170940972e-5
allele num: 42658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

FS
type: SiteQuality
SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 1.04e1

DP
type: SiteQuality
SIO_000300: 1.495481e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.533742331288344e-4
allele num: 6520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7136
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South Asian
type: Population
allele count: 0
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allele num: 13404
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.646e0

MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.843e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 351
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.363512407962912e-4
allele num: 7334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.601297565913588e-5
allele num: 43466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5212
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.065e0

QD
type: SiteQuality
SIO_000300: 1.518e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

DP
type: SiteQuality
SIO_000300: 1.509424e6

FS
type: SiteQuality
SIO_000300: 5.494e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.254283137962128e-5
allele num: 44360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.754e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.478864e6

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.249e0

QD
type: SiteQuality
SIO_000300: 4.95e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.332453438920662e-5
allele num: 13638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

QD
type: SiteQuality
SIO_000300: 7.22e0

DP
type: SiteQuality
SIO_000300: 1.447687e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.557e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.688e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.287701317715959e-5
allele num: 43712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5236
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

DP
type: SiteQuality
SIO_000300: 1.398738e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

FS
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.397e-1

QD
type: SiteQuality
SIO_000300: 7.34e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.82e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 49

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.399384270920795e-4
allele num: 7146
num of homozygotes: 0

African
type: Population
allele count: 52
allele frequency: 6.174305390643553e-3
allele num: 8422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

QD
type: SiteQuality
SIO_000300: 1.613e1

DP
type: SiteQuality
SIO_000300: 1.333227e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.42600679281902e-5
allele num: 41220
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

FS
type: SiteQuality
SIO_000300: 4.225e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.62e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.321948e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13030
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 39994
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4982
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.73e-1

FS
type: SiteQuality
SIO_000300: 3.522e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 1.305916e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13092
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4996
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.940711462450593e-4
allele num: 6072
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.713e0

QD
type: SiteQuality
SIO_000300: 5.8e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 3.407e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.300394e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.395e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.258452963138245e-5
allele num: 38034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.287001287001287e-4
allele num: 7770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12668
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.238e0

DP
type: SiteQuality
SIO_000300: 1.279689e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.109e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.112e0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6715
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1334
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1843
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 9.937535491198182e-4
allele num: 7044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.124e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

DP
type: SiteQuality
SIO_000300: 1.271407e6

QD
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 131

GenotypeQuality
all individuals: 1041
bin: 6.25e1
variant carriers: 316

GenotypeQuality
all individuals: 1086
bin: 5.25e1
variant carriers: 496

GenotypeQuality
all individuals: 2259
bin: 1.75e1
variant carriers: 213

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 275

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 397

GenotypeQuality
all individuals: 674
bin: 6.75e1
variant carriers: 251

GenotypeQuality
all individuals: 5821
bin: 7.5e0
variant carriers: 195

GenotypeQuality
all individuals: 2703
bin: 9.75e1
variant carriers: 1001

GenotypeQuality
all individuals: 1156
bin: 4.75e1
variant carriers: 552

GenotypeQuality
all individuals: 555
bin: 7.25e1
variant carriers: 278

GenotypeQuality
all individuals: 1368
bin: 3.75e1
variant carriers: 472

GenotypeQuality
all individuals: 417
bin: 8.25e1
variant carriers: 182

GenotypeQuality
all individuals: 5412
bin: 2.25e1
variant carriers: 266

East Asian
type: Population
allele count: 329
allele frequency: 1.44806338028169e-1
allele num: 2272
num of homozygotes: 1

Latino
type: Population
allele count: 593
allele frequency: 2.784037558685446e-1
allele num: 2130
num of homozygotes: 10

Other
type: Population
allele count: 37
allele frequency: 1.340579710144928e-1
allele num: 276
num of homozygotes: 0

African
type: Population
allele count: 315
allele frequency: 7.29504400185271e-2
allele num: 4318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1472
allele frequency: 9.106656768126702e-2
allele num: 16164
num of homozygotes: 0

South Asian
type: Population
allele count: 1829
allele frequency: 2.853354134165367e-1
allele num: 6410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 34
allele frequency: 1.619047619047619e-2
allele num: 2100
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.729e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

DP
type: SiteQuality
SIO_000300: 1.100507e6

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.07e0

GenotypeQuality
all individuals: 5412
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1086
bin: 5.25e1
variant carriers: 22

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 5821
bin: 7.5e0
variant carriers: 10

GenotypeQuality
all individuals: 1041
bin: 6.25e1
variant carriers: 12

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1368
bin: 3.75e1
variant carriers: 10

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1156
bin: 4.75e1
variant carriers: 13

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 13

GenotypeQuality
all individuals: 555
bin: 7.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1735
bin: 2.75e1
variant carriers: 12

GenotypeQuality
all individuals: 674
bin: 6.75e1
variant carriers: 8

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 1.484780994803266e-3
allele num: 16164
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 7.981220657276996e-3
allele num: 2130
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 2.084298286243631e-3
allele num: 4318
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 2.640845070422535e-3
allele num: 2272
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 7.246376811594203e-3
allele num: 276
num of homozygotes: 0

South Asian
type: Population
allele count: 43
allele frequency: 6.70826833073323e-3
allele num: 6410
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

QD
type: SiteQuality
SIO_000300: 3.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.729e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

DP
type: SiteQuality
SIO_000300: 1.100507e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2643
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5821
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2259
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2703
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5412
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.401408450704225e-4
allele num: 2272
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 9.389671361502347e-4
allele num: 2130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.855976243504083e-4
allele num: 16164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4318
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.1201248049922e-4
allele num: 6410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.729e-1

QD
type: SiteQuality
SIO_000300: 3.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.100507e6

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Other
type: Population
allele count: 1
allele frequency: 3.623188405797101e-3
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.186587478346944e-5
allele num: 16164
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 1.877934272300469e-3
allele num: 2130
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.07e0

DP
type: SiteQuality
SIO_000300: 1.100507e6

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.729e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1156
bin: 4.75e1
variant carriers: 362

GenotypeQuality
all individuals: 1041
bin: 6.25e1
variant carriers: 207

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 75

GenotypeQuality
all individuals: 417
bin: 8.25e1
variant carriers: 92

GenotypeQuality
all individuals: 5821
bin: 7.5e0
variant carriers: 170

GenotypeQuality
all individuals: 2259
bin: 1.75e1
variant carriers: 196

GenotypeQuality
all individuals: 1086
bin: 5.25e1
variant carriers: 386

GenotypeQuality
all individuals: 27982
bin: 2.5e0
variant carriers: 169

GenotypeQuality
all individuals: 1583
bin: 3.25e1
variant carriers: 295

GenotypeQuality
all individuals: 674
bin: 6.75e1
variant carriers: 188

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 55

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 144

GenotypeQuality
all individuals: 1735
bin: 2.75e1
variant carriers: 281

GenotypeQuality
all individuals: 555
bin: 7.25e1
variant carriers: 140

South Asian
type: Population
allele count: 852
allele frequency: 1.329173166926677e-1
allele num: 6410
num of homozygotes: 0

East Asian
type: Population
allele count: 238
allele frequency: 1.047535211267606e-1
allele num: 2272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1959
allele frequency: 1.211952487008166e-1
allele num: 16164
num of homozygotes: 0

Latino
type: Population
allele count: 186
allele frequency: 8.732394366197183e-2
allele num: 2130
num of homozygotes: 0

African
type: Population
allele count: 816
allele frequency: 1.889763779527559e-1
allele num: 4318
num of homozygotes: 17

European (Finnish)
type: Population
allele count: 113
allele frequency: 5.380952380952381e-2
allele num: 2100
num of homozygotes: 0

Other
type: Population
allele count: 38
allele frequency: 1.376811594202899e-1
allele num: 276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.729e-1

QD
type: SiteQuality
SIO_000300: 3.07e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.100507e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2703
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1086
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5821
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 1005
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 417
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1583
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 280
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1735
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 552
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1041
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 674
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1079
bin: 4.25e1
variant carriers: 3

Latino
type: Population
allele count: 1
allele frequency: 4.694835680751174e-4
allele num: 2130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 7.423904974016332e-4
allele num: 16164
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.40405616224649e-3
allele num: 6410
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 6.947660954145438e-4
allele num: 4318
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.401408450704225e-4
allele num: 2272
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.100507e6

QD
type: SiteQuality
SIO_000300: 3.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.729e-1