11-65629482-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629482
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629482
    reference: chr 11
allele count: 4
allele frequency: 4.55933980759586e-5
allele num: 87732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.191G>C
  hgvsp: ENSP00000432287.1:p.Arg64Pro
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.654G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.102G>C
  hgvsp: ENSP00000433809.1:p.Arg35Pro
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.189G>C
  hgvsp: ENSP00000434305.1:p.Arg64Pro
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.416G>C
  hgvsp: ENSP00000307853.4:p.Arg139Pro
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.204G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000172757
  ensembl protein: ENSP00000436431
  ensembl transcript: ENST00000532134
  gene symbol: CFL1
  hgvsc: ENST00000532134.1:c.-361C>G
  variant of: http://identifiers.org/hgnc/1874
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.310G>C
  hgvsp: ENSP00000433473.1:p.Arg104Pro
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.191G>C
  hgvsp: ENSP00000431478.1:p.Arg64Pro
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg139Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum

11-65629498-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629498
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629498
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 87024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.326G>C
  hgvsp: ENST00000524647.1:c.326G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.432G>C
  hgvsp: ENST00000308110.4:c.432G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.207G>C
  hgvsp: ENST00000533035.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.220G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.207G>C
  hgvsp: ENST00000525768.1:c.207G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.670G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.118G>C
  hgvsp: ENST00000530111.1:c.118G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.205G>C
  hgvsp: ENST00000529374.1:c.205G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4707
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3306
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val144Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

11-65629501-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629501
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629501
    reference: chr 11
allele count: 2
allele frequency: 2.302980056192713e-5
allele num: 86844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.210C>G
  hgvsp: ENST00000533035.1:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.210C>G
  hgvsp: ENST00000525768.1:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.673C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.329C>G
  hgvsp: ENST00000524647.1:c.329C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.208C>G
  hgvsp: ENST00000529374.1:c.208C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.435C>G
  hgvsp: ENST00000308110.4:c.435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.223C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.121C>G
  hgvsp: ENST00000530111.1:c.121C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15338
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5469
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20801
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu145Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

11-65629505-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629505
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629505
    reference: chr 11
allele count: 4
allele frequency: 4.625132972572962e-5
allele num: 86484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.212C>T
  hgvsp: ENSP00000434305.1:p.Arg72Trp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.439C>T
  hgvsp: ENSP00000307853.4:p.Arg147Trp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.214C>T
  hgvsp: ENSP00000431478.1:p.Arg72Trp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.333C>T
  hgvsp: ENSP00000433473.1:p.Arg112Trp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.125C>T
  hgvsp: ENSP00000433809.1:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.214C>T
  hgvsp: ENSP00000432287.1:p.Arg72Trp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.677C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.227C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15601
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg147Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

11-65629506-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629506
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629506
    reference: chr 11
allele count: 1
allele frequency: 1.15877540615078e-5
allele num: 86298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.126G>A
  hgvsp: ENSP00000433809.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.678G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.334G>A
  hgvsp: ENSP00000433473.1:p.Arg112Gln
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.215G>A
  hgvsp: ENSP00000432287.1:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.215G>A
  hgvsp: ENSP00000431478.1:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.213G>A
  hgvsp: ENSP00000434305.1:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.440G>A
  hgvsp: ENSP00000307853.4:p.Arg147Gln
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.228G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5094
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.5e0
  variant carriers: 1
hgvs: p.Arg147Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

11-65629510-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629510
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629510
    reference: chr 11
allele count: 1
allele frequency: 1.154201292705448e-5
allele num: 86640
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.130G>A
  hgvsp: ENST00000530111.1:c.130G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.219G>A
  hgvsp: ENST00000533035.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.444G>A
  hgvsp: ENST00000308110.4:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.219G>A
  hgvsp: ENST00000525768.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.217G>A
  hgvsp: ENST00000529374.1:c.217G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.338G>A
  hgvsp: ENST00000524647.1:c.338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.682G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.232G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu148Glu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD

11-65629513-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629513
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629513
    reference: chr 11
allele count: 1
allele frequency: 1.154094728095282e-5
allele num: 86648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.222C>T
  hgvsp: ENST00000525768.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.222C>T
  hgvsp: ENST00000533035.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.235C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.220C>T
  hgvsp: ENST00000529374.1:c.220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.447C>T
  hgvsp: ENST00000308110.4:c.447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.341C>T
  hgvsp: ENST00000524647.1:c.341C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.685C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.133C>T
  hgvsp: ENST00000530111.1:c.133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8339
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3675
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5890
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His149His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

11-65629514-C-CTGGTGAGCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629514
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629523
    reference: chr 11
allele count: 1
allele frequency: 1.162925921618793e-5
allele num: 85990
alternate allele: CTGGTGAGCA
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15283
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6062
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

11-65629516-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629516
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629516
    reference: chr 11
allele count: 7
allele frequency: 8.120838070488874e-5
allele num: 86198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223G>A
  hgvsp: ENST00000529374.1:c.223G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225G>A
  hgvsp: ENST00000525768.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136G>A
  hgvsp: ENST00000530111.1:c.136G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450G>A
  hgvsp: ENST00000308110.4:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344G>A
  hgvsp: ENST00000524647.1:c.344G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225G>A
  hgvsp: ENST00000533035.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11953
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8757
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16327
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 9.75e1
  variant carriers: 7
hgvs: c.450G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

11-65629520-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629520
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629521
    reference: chr 11
allele count: 6
allele frequency: 6.92728658184589e-5
allele num: 86614
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+5dupG
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+5dupG
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15199
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16459
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20843
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
hgvs: c.450+5dupG
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-65629521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629521
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629521
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 86454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+5G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+5G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15160
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20738
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
hgvs: c.450+5G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-65629524-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629524
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629524
    reference: chr 11
allele count: 4
allele frequency: 4.635638791025404e-5
allele num: 86288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+8C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+8C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5508
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
hgvs: c.450+8C>T
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

11-65629526-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629526
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629526
    reference: chr 11
allele count: 1
allele frequency: 1.167705924939863e-5
allele num: 85638
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+10G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+10G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10928
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19715
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5576
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

11-65629535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629535
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629535
    reference: chr 11
allele count: 8
allele frequency: 9.38130306299545e-5
allele num: 85276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+19C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+19C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9834
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15060
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16447
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10901
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6333
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5551
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

11-65629536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629536
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629536
    reference: chr 11
allele count: 134
allele frequency: 1.562791565590595e-3
allele num: 85744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+20G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+20G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16394
  bin: 1.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 1.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11073
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 15022
  bin: 7.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5537
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10765
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

11-65629537-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629537
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629537
    reference: chr 11
allele count: 1
allele frequency: 1.158050768945711e-5
allele num: 86352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+21G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+21G>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5586
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/11-65629539-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629539
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629539
    reference: chr 11
allele count: 12
allele frequency: 1.387347391786903e-4
allele num: 86496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+23A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+23A>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11361
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9617
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16354
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14991
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5569
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-65629540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629540
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629540
    reference: chr 11
allele count: 1
allele frequency: 1.154547763640982e-5
allele num: 86614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+24G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+24G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16358
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19473
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5552
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

11-65629542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629542
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629542
    reference: chr 11
allele count: 5
allele frequency: 5.819637785744215e-5
allele num: 85916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+26C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+26C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11526
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19069
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

11-65629543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629543
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629543
    reference: chr 11
allele count: 17
allele frequency: 1.961689360720055e-4
allele num: 86660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+27G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+27G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16203
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14769
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11814
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-65629547-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629547
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629547
    reference: chr 11
allele count: 2
allele frequency: 2.288329519450801e-5
allele num: 87400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+31C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+31C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12589
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19063
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-65629548-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629548
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629548
    reference: chr 11
allele count: 1
allele frequency: 1.142674314966748e-5
allele num: 87514
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+32C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+32C>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15832
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5268
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ

11-65629549-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629549
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629549
    reference: chr 11
allele count: 1
allele frequency: 1.137527016266636e-5
allele num: 87910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+33A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+33A>G
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1875
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

11-65629564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629564
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629564
    reference: chr 11
allele count: 2
allele frequency: 2.221037668798863e-5
allele num: 90048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.136+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.688+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.450+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.223+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.225+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.344+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.225+48G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.238+48G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14695
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8321
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16405
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5925
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4800
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

11-65629642-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629642
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629642
    reference: chr 11
allele count: 17
allele frequency: 1.407844176493971e-4
allele num: 120752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-40T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-40T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9858
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6507
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30441
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-65629651-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629651
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629651
    reference: chr 11
allele count: 2
allele frequency: 1.656067832538421e-5
allele num: 120768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-31G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-31G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30446
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7353
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

11-65629653-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629653
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629654
    reference: chr 11
allele count: 17
allele frequency: 1.407517800960424e-4
allele num: 120780
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-28dupT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-28dupT
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9690
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9873
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30457
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

11-65629658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629658
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629658
    reference: chr 11
allele count: 1
allele frequency: 8.277460475126231e-6
allele num: 120810
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-24C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-24C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

11-65629659-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629659
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629659
    reference: chr 11
allele count: 2
allele frequency: 1.655327672112695e-5
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-23T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-23T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30453
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7564
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

11-65629662-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629662
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629662
    reference: chr 11
allele count: 2
allele frequency: 1.655190677966102e-5
allele num: 120832
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-20C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-20C>G
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

11-65629663-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629663
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629663
    reference: chr 11
allele count: 10
allele frequency: 8.275679433281473e-5
allele num: 120836
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-19T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-19T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30453
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

11-65629666-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629666
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629666
    reference: chr 11
allele count: 11
allele frequency: 9.102343439692837e-5
allele num: 120848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-16T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-16T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4516
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7641
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

11-65629671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629671
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629671
    reference: chr 11
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-11C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-11C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30449
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3919
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

11-65629672-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629672
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629672
    reference: chr 11
allele count: 13
allele frequency: 1.075322183069466e-4
allele num: 120894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-10T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-10T>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4004
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

11-65629672-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629672
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629672
    reference: chr 11
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-10T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-10T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3920
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

11-65629674-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629674
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629674
    reference: chr 11
allele count: 4
allele frequency: 3.308409978164494e-5
allele num: 120904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-8G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-8G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 7.25e1
  variant carriers: 0
hgvs: c.451-8G>A
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-65629674-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629674
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629674
    reference: chr 11
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-8G>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-8G>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3921
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: c.451-8G>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-65629680-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629680
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629680
    reference: chr 11
allele count: 2
allele frequency: 1.653685237551884e-5
allele num: 120942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.226-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.239-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.137-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.226-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.224-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.451-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.689-2A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.345-2A>G
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
hgvs: c.451-2A>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-65629685-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629685
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629685
    reference: chr 11
allele count: 1
allele frequency: 8.266785708380868e-6
allele num: 120966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.692C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.227C>A
  hgvsp: ENSP00000434305.1:p.Pro77Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.454C>A
  hgvsp: ENSP00000307853.4:p.Pro152Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.229C>A
  hgvsp: ENSP00000431478.1:p.Pro77Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.348C>A
  hgvsp: ENSP00000433473.1:p.Pro117Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.140C>A
  hgvsp: ENSP00000433809.1:p.Pro48Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.229C>A
  hgvsp: ENSP00000432287.1:p.Pro77Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.242C>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2843
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro152Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-65629686-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629686
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629686
    reference: chr 11
allele count: 1
allele frequency: 8.266649031148734e-6
allele num: 120968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.693C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.455C>G
  hgvsp: ENSP00000307853.4:p.Pro152Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.228C>G
  hgvsp: ENSP00000434305.1:p.Pro77Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.243C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.230C>G
  hgvsp: ENSP00000432287.1:p.Pro77Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.141C>G
  hgvsp: ENSP00000433809.1:p.Pro48Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.230C>G
  hgvsp: ENSP00000431478.1:p.Pro77Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.349C>G
  hgvsp: ENSP00000433473.1:p.Pro117Arg
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7831
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro152Arg
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

11-65629688-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629688
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629688
    reference: chr 11
allele count: 1
allele frequency: 8.266375690242371e-6
allele num: 120972
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.351A>G
  hgvsp: ENSP00000433473.1:p.Asn118Asp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.230A>G
  hgvsp: ENSP00000434305.1:p.Asn78Asp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.457A>G
  hgvsp: ENSP00000307853.4:p.Asn153Asp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.143A>G
  hgvsp: ENSP00000433809.1:p.Asn49Asp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.695A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.232A>G
  hgvsp: ENSP00000432287.1:p.Asn78Asp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.232A>G
  hgvsp: ENSP00000431478.1:p.Asn78Asp
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.245A>G
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4011
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7832
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn153Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-65629690-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629690
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629690
    reference: chr 11
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.145T>C
  hgvsp: ENST00000530111.1:c.145T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.459T>C
  hgvsp: ENST00000308110.4:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.232T>C
  hgvsp: ENST00000529374.1:c.232T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.234T>C
  hgvsp: ENST00000533035.1:c.234T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.234T>C
  hgvsp: ENST00000525768.1:c.234T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.247T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.353T>C
  hgvsp: ENST00000524647.1:c.353T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.697T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7835
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn153Asn
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

11-65629693-TCAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629693
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629690
    reference: chr 11
allele count: 87
allele frequency: 7.190439195332e-4
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.704_706delCAC
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.254_256delCAC
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.241_243delCAC
  hgvsp: ENSP00000432287.1:p.His81del
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.360_362delCAC
  hgvsp: ENSP00000433473.1:p.His121del
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.241_243delCAC
  hgvsp: ENSP00000431478.1:p.His81del
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.239_241delCAC
  hgvsp: ENSP00000434305.1:p.His81del
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.466_468delCAC
  hgvsp: ENSP00000307853.4:p.His156del
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.152_154delCAC
  hgvsp: ENSP00000433809.1:p.His52del
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9870
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8321
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 6.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 30503
  bin: 9.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 3919
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His156del
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: TCAC
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

11-65629694-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629694
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629694
    reference: chr 11
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.251C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.463C>T
  hgvsp: ENSP00000307853.4:p.His155Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.238C>T
  hgvsp: ENSP00000432287.1:p.His80Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.149C>T
  hgvsp: ENSP00000433809.1:p.His51Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.357C>T
  hgvsp: ENSP00000433473.1:p.His120Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.236C>T
  hgvsp: ENSP00000434305.1:p.His80Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.238C>T
  hgvsp: ENSP00000431478.1:p.His80Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.701C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4009
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2837
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His155Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

11-65629695-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629695
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629695
    reference: chr 11
allele count: 2
allele frequency: 1.654341820106871e-5
allele num: 120894
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.464A>G
  hgvsp: ENSP00000307853.4:p.His155Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.237A>G
  hgvsp: ENSP00000434305.1:p.His80Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.358A>G
  hgvsp: ENSP00000433473.1:p.His120Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.252A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.239A>G
  hgvsp: ENSP00000432287.1:p.His80Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.239A>G
  hgvsp: ENSP00000431478.1:p.His80Arg
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.702A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.150A>G
  hgvsp: ENSP00000433809.1:p.His51Arg
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His155Arg
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-65629707-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629707
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629707
    reference: chr 11
allele count: 1
allele frequency: 8.263916435277007e-6
allele num: 121008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.249C>A
  hgvsp: ENSP00000434305.1:p.Thr84Asn
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.251C>A
  hgvsp: ENSP00000432287.1:p.Thr84Asn
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.370C>A
  hgvsp: ENSP00000433473.1:p.Thr124Asn
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.162C>A
  hgvsp: ENSP00000433809.1:p.Thr55Asn
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.251C>A
  hgvsp: ENSP00000431478.1:p.Thr84Asn
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.714C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.476C>A
  hgvsp: ENSP00000307853.4:p.Thr159Asn
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.264C>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4019
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr159Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

11-65629717-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629717
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629717
    reference: chr 11
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.259G>A
  hgvsp: ENST00000529374.1:c.259G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.486G>A
  hgvsp: ENST00000308110.4:c.486G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.380G>A
  hgvsp: ENST00000524647.1:c.380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.261G>A
  hgvsp: ENST00000533035.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.261G>A
  hgvsp: ENST00000525768.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.724G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.172G>A
  hgvsp: ENST00000530111.1:c.172G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.274G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2843
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3949
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu162Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

11-65629718-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629718
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629718
    reference: chr 11
allele count: 1
allele frequency: 8.263097008758882e-6
allele num: 121020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.262C>T
  hgvsp: ENST00000525768.1:c.262C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.725C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.260C>T
  hgvsp: ENST00000529374.1:c.260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.487C>T
  hgvsp: ENST00000308110.4:c.487C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.381C>T
  hgvsp: ENST00000524647.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.275C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.173C>T
  hgvsp: ENST00000530111.1:c.173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.262C>T
  hgvsp: ENST00000533035.1:c.262C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6520
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3949
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30446
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4018
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu163Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-65629726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629726
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629726
    reference: chr 11
allele count: 3
allele frequency: 2.479215906649257e-5
allele num: 121006
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.733G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.270G>A
  hgvsp: ENST00000525768.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.283G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.270G>A
  hgvsp: ENST00000533035.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.268G>A
  hgvsp: ENST00000529374.1:c.268G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.389G>A
  hgvsp: ENST00000524647.1:c.389G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.181G>A
  hgvsp: ENST00000530111.1:c.181G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.495G>A
  hgvsp: ENST00000308110.4:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln165Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

11-65629728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629728
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629728
    reference: chr 11
allele count: 3
allele frequency: 2.479297862845242e-5
allele num: 121002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.183G>A
  hgvsp: ENSP00000433809.1:p.Arg62Lys
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.391G>A
  hgvsp: ENSP00000433473.1:p.Arg131Lys
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.735G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.270G>A
  hgvsp: ENSP00000434305.1:p.Arg91Lys
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.285G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.497G>A
  hgvsp: ENSP00000307853.4:p.Arg166Lys
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.272G>A
  hgvsp: ENSP00000432287.1:p.Arg91Lys
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.272G>A
  hgvsp: ENSP00000431478.1:p.Arg91Lys
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg166Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

11-65629729-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629729
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629729
    reference: chr 11
allele count: 6
allele frequency: 4.958759648919817e-5
allele num: 120998
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.498G>A
  hgvsp: ENST00000308110.4:c.498G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.392G>A
  hgvsp: ENST00000524647.1:c.392G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.736G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.273G>A
  hgvsp: ENST00000525768.1:c.273G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.271G>A
  hgvsp: ENST00000529374.1:c.271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.273G>A
  hgvsp: ENST00000533035.1:c.273G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.286G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.184G>A
  hgvsp: ENST00000530111.1:c.184G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg166Arg
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-65629729-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629729
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629729
    reference: chr 11
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.271G>C
  hgvsp: ENSP00000434305.1:p.Arg91Ser
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.184G>C
  hgvsp: ENSP00000433809.1:p.Arg62Ser
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.273G>C
  hgvsp: ENSP00000431478.1:p.Arg91Ser
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.273G>C
  hgvsp: ENSP00000432287.1:p.Arg91Ser
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.498G>C
  hgvsp: ENSP00000307853.4:p.Arg166Ser
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.736G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.392G>C
  hgvsp: ENSP00000433473.1:p.Arg131Ser
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.286G>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg166Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-65629743-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629743
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629743
    reference: chr 11
allele count: 9
allele frequency: 7.441829697861714e-5
allele num: 120938
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.512C>A
  hgvsp: ENSP00000307853.4:p.Ser171Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.287C>A
  hgvsp: ENSP00000432287.1:p.Ser96Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.406C>A
  hgvsp: ENSP00000433473.1:p.Ser136Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.287C>A
  hgvsp: ENSP00000431478.1:p.Ser96Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.300C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.750C>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.198C>A
  hgvsp: ENSP00000433809.1:p.Ser67Tyr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.285C>A
  hgvsp: ENSP00000434305.1:p.Ser96Tyr
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4014
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30447
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser171Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

11-65629743-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629743
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629743
    reference: chr 11
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.300C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.287C>T
  hgvsp: ENSP00000432287.1:p.Ser96Phe
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.287C>T
  hgvsp: ENSP00000431478.1:p.Ser96Phe
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.512C>T
  hgvsp: ENSP00000307853.4:p.Ser171Phe
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.285C>T
  hgvsp: ENSP00000434305.1:p.Ser96Phe
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.406C>T
  hgvsp: ENSP00000433473.1:p.Ser136Phe
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.750C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.198C>T
  hgvsp: ENSP00000433809.1:p.Ser67Phe
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30447
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser171Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

11-65629747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629747
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629747
    reference: chr 11
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.516C>T
  hgvsp: ENST00000308110.4:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.291C>T
  hgvsp: ENST00000533035.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.291C>T
  hgvsp: ENST00000525768.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.289C>T
  hgvsp: ENST00000529374.1:c.289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.304C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.410C>T
  hgvsp: ENST00000524647.1:c.410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.202C>T
  hgvsp: ENST00000530111.1:c.202C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.754C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30438
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro172Pro
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-65629748-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629748
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629748
    reference: chr 11
allele count: 2
allele frequency: 1.653958750268768e-5
allele num: 120922
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.517A>C
  hgvsp: ENST00000308110.4:c.517A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.203A>C
  hgvsp: ENST00000530111.1:c.203A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.411A>C
  hgvsp: ENST00000524647.1:c.411A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.305A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.755A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.292A>C
  hgvsp: ENST00000525768.1:c.292A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.290A>C
  hgvsp: ENST00000529374.1:c.290A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.292A>C
  hgvsp: ENST00000533035.1:c.292A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7557
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
hgvs: c.517A>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

11-65629749-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629749
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629749
    reference: chr 11
allele count: 2
allele frequency: 1.654095540558423e-5
allele num: 120912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.291G>C
  hgvsp: ENSP00000434305.1:p.Arg98Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.518G>C
  hgvsp: ENSP00000307853.4:p.Arg173Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.293G>C
  hgvsp: ENSP00000432287.1:p.Arg98Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.412G>C
  hgvsp: ENSP00000433473.1:p.Arg138Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.293G>C
  hgvsp: ENSP00000431478.1:p.Arg98Thr
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.756G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.306G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.204G>C
  hgvsp: ENSP00000433809.1:p.Arg69Thr
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30439
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4499
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg173Thr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

11-65629762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629762
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629762
    reference: chr 11
allele count: 1
allele frequency: 8.27417299640901e-6
allele num: 120858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.413+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.294+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.292+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.205+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.294+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.757+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.519+12G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.307+12G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7060
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

11-65629776-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629776
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629776
    reference: chr 11
allele count: 3
allele frequency: 2.484472049689441e-5
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.205+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.294+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.519+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.757+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.307+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.294+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.292+26G>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.413+26G>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2754
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30431
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/11-65629781-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629781
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629781
    reference: chr 11
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.205+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.307+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.519+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.757+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.292+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.294+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.294+31A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.413+31A>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-65629784-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629784
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629784
    reference: chr 11
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.294+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.519+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.294+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.757+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.205+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.413+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.307+34T>A
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.292+34T>A
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9831
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3860
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3994
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

11-65629789-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629789
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629789
    reference: chr 11
allele count: 1
allele frequency: 8.288987251537607e-6
allele num: 120642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.294+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.757+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.519+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.413+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.292+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.205+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.294+39C>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.307+39C>G
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2724
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-65629866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629866
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629866
    reference: chr 11
allele count: 1
allele frequency: 8.264872638312644e-6
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.295-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.308-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.758-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.295-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.414-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.206-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.293-49C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.520-49C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

11-65629884-GCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629884
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629882
    reference: chr 11
allele count: 1
allele frequency: 8.265145879824779e-6
allele num: 120990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.293-26_293-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.414-26_414-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.758-26_758-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.295-26_295-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.520-26_520-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.206-26_206-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.308-26_308-25delCT
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.295-26_295-25delCT
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: GCT
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

11-65629890-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629890
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629890
    reference: chr 11
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.293-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.295-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.758-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.308-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.414-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.206-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.295-25T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.520-25T>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

11-65629906-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629906
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629906
    reference: chr 11
allele count: 1
allele frequency: 8.262823902696986e-6
allele num: 121024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.293-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.295-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.206-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.520-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.308-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.758-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.414-9G>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.295-9G>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

11-65629917-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629917
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629917
    reference: chr 11
allele count: 2
allele frequency: 1.652674026574998e-5
allele num: 121016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.760A>G
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.297A>G
  hgvsp: ENST00000533035.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.297A>G
  hgvsp: ENST00000525768.1:c.297A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.208A>G
  hgvsp: ENST00000530111.1:c.208A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.295A>G
  hgvsp: ENST00000529374.1:c.295A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.522A>G
  hgvsp: ENST00000308110.4:c.522A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.416A>G
  hgvsp: ENST00000524647.1:c.416A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.310A>G
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
hgvs: c.522A>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

11-65629919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629919
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629919
    reference: chr 11
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.299C>T
  hgvsp: ENSP00000431478.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.418C>T
  hgvsp: ENSP00000433473.1:p.Ala140Val
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.312C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.762C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.297C>T
  hgvsp: ENSP00000434305.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.524C>T
  hgvsp: ENSP00000307853.4:p.Ala175Val
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.299C>T
  hgvsp: ENSP00000432287.1:p.Ala100Val
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.210C>T
  hgvsp: ENSP00000433809.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1987
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala175Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

11-65629932-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629932
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629932
    reference: chr 11
allele count: 69492
allele frequency: 5.752268061717767e-1
allele num: 120808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.325T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.537T>C
  hgvsp: ENST00000308110.4:c.537T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.775T>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.312T>C
  hgvsp: ENST00000533035.1:c.312T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.312T>C
  hgvsp: ENST00000525768.1:c.312T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.223T>C
  hgvsp: ENST00000530111.1:c.223T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.310T>C
  hgvsp: ENST00000529374.1:c.310T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.431T>C
  hgvsp: ENST00000524647.1:c.431T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.25e1
  variant carriers: 310
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 2.75e1
  variant carriers: 448
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 7.75e1
  variant carriers: 2455
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 6.25e1
  variant carriers: 2266
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 3.75e1
  variant carriers: 880
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 4.25e1
  variant carriers: 1164
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 3.25e1
  variant carriers: 588
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 8.75e1
  variant carriers: 2433
genotype depth: GenotypeDepth
  all individuals: 22197
  bin: 9.75e1
  variant carriers: 22119
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 6.75e1
  variant carriers: 2389
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 7.25e1
  variant carriers: 2532
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 8.25e1
  variant carriers: 2465
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 4.75e1
  variant carriers: 1481
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 5.25e1
  variant carriers: 1738
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 9.25e1
  variant carriers: 2533
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 5.75e1
  variant carriers: 2022
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 9.25e1
  variant carriers: 212
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.25e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 40
hgvs: p.Ala179Ala
num of homozygotes: 21453
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-65629933-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65629933
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65629933
    reference: chr 11
allele count: 9
allele frequency: 7.428561995476831e-5
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.313C>T
  hgvsp: ENSP00000432287.1:p.Arg105Ter
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.311C>T
  hgvsp: ENSP00000434305.1:p.Arg105Ter
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.313C>T
  hgvsp: ENSP00000431478.1:p.Arg105Ter
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.776C>T
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.538C>T
  hgvsp: ENSP00000307853.4:p.Arg180Ter
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.224C>T
  hgvsp: ENSP00000433809.1:p.Arg76Ter
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.432C>T
  hgvsp: ENSP00000433473.1:p.Arg145Ter
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.326C>T
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22301
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg180Ter
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-65630551-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65630551
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 65630551
    reference: chr 11
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433809
  ensembl transcript: ENST00000530111
  gene symbol: MUS81
  hgvsc: ENST00000530111.1:c.307A>C
  hgvsp: ENST00000530111.1:c.307A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000434305
  ensembl transcript: ENST00000529374
  gene symbol: MUS81
  hgvsc: ENST00000529374.1:c.394A>C
  hgvsp: ENST00000529374.1:c.394A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000432287
  ensembl transcript: ENST00000533035
  gene symbol: MUS81
  hgvsc: ENST00000533035.1:c.396A>C
  hgvsp: ENST00000533035.1:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000530928
  gene symbol: MUS81
  hgvsc: ENST00000530928.1:n.4A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000531905
  gene symbol: MUS81
  hgvsc: ENST00000531905.1:n.859A>C
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000433473
  ensembl transcript: ENST00000524647
  gene symbol: MUS81
  hgvsc: ENST00000524647.1:c.515A>C
  hgvsp: ENST00000524647.1:c.515A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000307853
  ensembl transcript: ENST00000308110
  gene symbol: MUS81
  hgvsc: ENST00000308110.4:c.621A>C
  hgvsp: ENST00000308110.4:c.621A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172732
  ensembl protein: ENSP00000431478
  ensembl transcript: ENST00000525768
  gene symbol: MUS81
  hgvsc: ENST00000525768.1:c.396A>C
  hgvsp: ENST00000525768.1:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29814
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000172732
  ensembl transcript: ENST00000533555
  gene symbol: MUS81
  hgvsc: ENST00000533555.1:n.409A>C
  variant of: http://identifiers.org/hgnc/29814
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro207Pro
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 795
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20062
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.014772384684956e-4
allele num: 13268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

DP
type: SiteQuality
SIO_000300: 1.029742e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 14266
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48628
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.103e0

QD
type: SiteQuality
SIO_000300: 1.377e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 9.75231e5

GenotypeQuality
all individuals: 1157
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 120
bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13776
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.063046707377455e-5
allele num: 48472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.543753771876886e-5
allele num: 13256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.152e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

QD
type: SiteQuality
SIO_000300: 1.341e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.24e-1

DP
type: SiteQuality
SIO_000300: 9.69134e5

MQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

GenotypeQuality
all individuals: 3457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20910
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13985
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4950
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.424095699230988e-4
allele num: 7022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.215555463473253e-5
allele num: 48266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 1.2581e1

MQ
type: SiteQuality
SIO_000300: 5.896e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.648e0

QD
type: SiteQuality
SIO_000300: 9.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

DP
type: SiteQuality
SIO_000300: 9.65956e5

GenotypeQuality
all individuals: 815
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
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variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 4.25e1
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GenotypeQuality
all individuals: 1319
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variant carriers: 0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 430
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variant carriers: 0

GenotypeQuality
all individuals: 12683
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variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.075119319360863e-5
allele num: 48190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 9.59486e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.41e-1

QD
type: SiteQuality
SIO_000300: 3.85e0

VQSLOD
type: SiteQuality
SIO_000300: -2.657e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.56e-1

FS
type: SiteQuality
SIO_000300: 1.632e0

MQRankSum
type: SiteQuality
SIO_000300: -6.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3591
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5764
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21029
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
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variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7022
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.325908247149297e-4
allele num: 7542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13262
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.701e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 9.5616e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
all individuals: 542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21060
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13280
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.6061676839062e-4
allele num: 6226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.646e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

MQRankSum
type: SiteQuality
SIO_000300: -1.164e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.312e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.47e-1

DP
type: SiteQuality
SIO_000300: 9.53064e5

QD
type: SiteQuality
SIO_000300: 7.85e0

GenotypeQuality
all individuals: 3874
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10950
bin: 6.25e1
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GenotypeQuality
all individuals: 1764
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 234
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 5.75e1
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GenotypeQuality
all individuals: 1437
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1299
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3594
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.440092165898618e-4
allele num: 6944
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47968
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.96e-1

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

DP
type: SiteQuality
SIO_000300: 9.46791e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 4.77e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

GenotypeQuality
all individuals: 822
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6029
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5334
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
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GenotypeQuality
all individuals: 1966
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variant carriers: 0

GenotypeQuality
all individuals: 20594
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11955
bin: 6.25e1
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GenotypeQuality
all individuals: 1068
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
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GenotypeQuality
all individuals: 1267
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3851
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.039760439194809e-4
allele num: 48088
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.874389192296637e-4
allele num: 6958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.786e0

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.813e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.294e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 9.47672e5

GenotypeQuality
all individuals: 1030
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6073
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12776
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3852
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5385
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 9.727626459143969e-4
allele num: 6168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3688
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 2.001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

MQ
type: SiteQuality
SIO_000300: 6.045e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

DP
type: SiteQuality
SIO_000300: 9.47658e5

QD
type: SiteQuality
SIO_000300: 1.222e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.72e-1

GenotypeQuality
all individuals: 1075
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3890
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12463
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6966
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.899e-1

QD
type: SiteQuality
SIO_000300: 8.08e0

DP
type: SiteQuality
SIO_000300: 9.46685e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.017e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

GenotypeQuality
all individuals: 11782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3975
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6206
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.335826876836762e-4
allele num: 7486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.232600656500603e-5
allele num: 48134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13296
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 1.0333e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

QD
type: SiteQuality
SIO_000300: 1.289e1

DP
type: SiteQuality
SIO_000300: 9.43979e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.158e0

GenotypeQuality
all individuals: 4149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10064
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13292
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.347345728914039e-4
allele num: 7422
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 3.046e0

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

DP
type: SiteQuality
SIO_000300: 9.39221e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

QD
type: SiteQuality
SIO_000300: 1.63e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
all individuals: 540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 529
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1528
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19449
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47450
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.250900360144058e-4
allele num: 13328
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.720430107526882e-4
allele num: 5952
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.470588235294118e-4
allele num: 6800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 8.096e0

QD
type: SiteQuality
SIO_000300: 1.203e1

DP
type: SiteQuality
SIO_000300: 9.4239e5

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2203
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1499
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6290
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 9.75e1
variant carriers: 137

GenotypeQuality
all individuals: 439
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 264
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 420
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 494
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 556
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1598
bin: 4.75e1
variant carriers: 1

East Asian
type: Population
allele count: 129
allele frequency: 2.150716905635212e-2
allele num: 5998
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6866
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.239808869643124e-4
allele num: 13394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.192520543350663e-5
allele num: 47704
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.361e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 9.44115e5

GenotypeQuality
all individuals: 503
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6363
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11065
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.082378909666403e-5
allele num: 48022
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.164e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

FS
type: SiteQuality
SIO_000300: 9.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

DP
type: SiteQuality
SIO_000300: 9.44237e5

GenotypeQuality
all individuals: 102
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6380
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10835
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1504
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6052
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 8.899436369029962e-4
allele num: 13484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

FS
type: SiteQuality
SIO_000300: 1.443e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

DP
type: SiteQuality
SIO_000300: 9.45205e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeQuality
all individuals: 2057
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4264
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.074344507135745e-5
allele num: 48208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3776
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.18e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.931e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.701e1

DP
type: SiteQuality
SIO_000300: 9.46485e5

GenotypeQuality
all individuals: 567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2125
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6312
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5458
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10993
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.272738677706687e-5
allele num: 47826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.493428912783751e-4
allele num: 13392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6858
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.188e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.15e-1

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.50345e5

GenotypeQuality
all individuals: 1501
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5406
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1249
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6315
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1492
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.150066401062417e-5
allele num: 48192
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.597869507323569e-3
allele num: 7510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.217950613633003e-4
allele num: 13526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

DP
type: SiteQuality
SIO_000300: 9.54361e5

QD
type: SiteQuality
SIO_000300: 1.462e1

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 6153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
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variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48512
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.298153034300791e-4
allele num: 6064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7076
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.239e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 9.63894e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.056e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.131e1

GenotypeQuality
all individuals: 1928
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.059901948667244e-5
allele num: 48546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3912
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.134e0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 9.6633e5

QD
type: SiteQuality
SIO_000300: 1.631e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12934
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.052208175997373e-5
allele num: 48728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7146
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.68158e5

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 1.307e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 381
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
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variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
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GenotypeQuality
all individuals: 2195
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variant carriers: 0

GenotypeQuality
all individuals: 1748
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variant carriers: 0

GenotypeQuality
all individuals: 754
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variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.011424893394481e-5
allele num: 49716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13924
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.334044823906083e-4
allele num: 7496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.065e0

QD
type: SiteQuality
SIO_000300: 1.383e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.141e0

DP
type: SiteQuality
SIO_000300: 1.005909e6

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
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GenotypeQuality
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2729
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
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variant carriers: 0

GenotypeQuality
all individuals: 3933
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4441
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6872
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598302442404296e-4
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.113207547169811e-4
allele num: 66250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.494316e6

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.75e-2

FS
type: SiteQuality
SIO_000300: 6.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.259e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2809
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 3995
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variant carriers: 0

GenotypeQuality
all individuals: 4462
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018594542381067e-5
allele num: 66256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.438e0

DP
type: SiteQuality
SIO_000300: 2.4989e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.84e-1

QD
type: SiteQuality
SIO_000300: 1.158e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
all individuals: 262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7404
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 3909
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variant carriers: 0

GenotypeQuality
all individuals: 3944
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4002
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.550387596899225e-3
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66258
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.41e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

FS
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.419e1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

DP
type: SiteQuality
SIO_000300: 2.500055e6

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4494
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508841813024323e-5
allele num: 66276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.088e0

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

DP
type: SiteQuality
SIO_000300: 2.501551e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.006e0

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
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GenotypeQuality
all individuals: 4494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3914
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.33e-2

QD
type: SiteQuality
SIO_000300: 3.105e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 2.501805e6

GenotypeQuality
all individuals: 30452
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4009
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.314279102059708e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 3.909e0

DP
type: SiteQuality
SIO_000300: 2.502454e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.710801393728223e-4
allele num: 10332
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.502795e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

FS
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3920
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66306
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.27285350613284e-3
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

QD
type: SiteQuality
SIO_000300: 1.403e1

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 2.50326e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507704369327262e-5
allele num: 66326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.504258e6

QD
type: SiteQuality
SIO_000300: 1.373e1

FS
type: SiteQuality
SIO_000300: 2.753e0

MQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.933114247052001e-4
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.658424797973706e-4
allele num: 66328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

QD
type: SiteQuality
SIO_000300: 1.384e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 1.182e0

DP
type: SiteQuality
SIO_000300: 2.50474e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.222e0

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

FS
type: SiteQuality
SIO_000300: 1.182e0

QD
type: SiteQuality
SIO_000300: 1.384e1

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.50474e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.029362997799283e-5
allele num: 66342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

FS
type: SiteQuality
SIO_000300: 1.959e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
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SIO_000300: -3.476e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

DP
type: SiteQuality
SIO_000300: 2.504996e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66342
num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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MQ
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DP
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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SIO_000300: -1.2e-2

ClippingRankSum
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SIO_000300: -1.44e-1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.162e1

InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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ClippingRankSum
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SIO_000300: -2.14e-1

DP
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SIO_000300: 2.505482e6

ReadPosRankSum
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FS
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SIO_000300: 6.529e0

BaseQRankSum
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MQRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.648e0

DP
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SIO_000300: 2.505942e6

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-3

VQSLOD
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QD
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SIO_000300: 1.111e1

FS
type: SiteQuality
SIO_000300: 3.296e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.327e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

FS
type: SiteQuality
SIO_000300: 9.57e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
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SIO_000300: -2.193e0

DP
type: SiteQuality
SIO_000300: 2.506011e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

QD
type: SiteQuality
SIO_000300: 1.007e1

ClippingRankSum
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SIO_000300: -1.705e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.506166e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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FS
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QD
type: SiteQuality
SIO_000300: 1.309e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16508
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ReadPosRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 76
allele frequency: 1.144199211104754e-3
allele num: 66422
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.058361052313275e-3
allele num: 6614
num of homozygotes: 0

South Asian
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African
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allele frequency: 2.899671370578001e-4
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Other
type: Population
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allele frequency: 1.103752759381898e-3
allele num: 906
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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QD
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MQRankSum
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Latino
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European (Finnish)
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South Asian
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African
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Other
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MQ
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MQRankSum
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DP
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FS
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.014772384684956e-5
allele num: 66340
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Latino
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num of homozygotes: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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VQSLOD
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BaseQRankSum
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FS
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66432
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African
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allele frequency: 0.0e0
allele num: 10352
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Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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QD
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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African
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allele num: 10354
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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FS
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QD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10352
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Other
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East Asian
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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DP
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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FS
type: SiteQuality
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MQRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16510
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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DP
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Other
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Latino
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South Asian
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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Latino
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ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

QD
type: SiteQuality
SIO_000300: 1.19e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.591e0

FS
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.919e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.504912e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.245e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.089e1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 3.689e0

DP
type: SiteQuality
SIO_000300: 2.503903e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.97e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 2.503751e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.996e0

FS
type: SiteQuality
SIO_000300: 2.937e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.157e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.935359009096187e-4
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 2.503439e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.384e0

FS
type: SiteQuality
SIO_000300: 5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.49e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 132
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GenotypeQuality
all individuals: 3944
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507840772014475e-5
allele num: 66320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 8.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.705e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 2.796e0

VQSLOD
type: SiteQuality
SIO_000300: -1.191e0

DP
type: SiteQuality
SIO_000300: 2.498455e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.504e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019323671497584e-5
allele num: 66240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.392e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

DP
type: SiteQuality
SIO_000300: 2.489688e6

MQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.486947e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.083e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.66e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.9e-1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.197e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3939
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511395925276585e-5
allele num: 66164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.143e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1741
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.473e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.005e0

MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

FS
type: SiteQuality
SIO_000300: 7.13e0

DP
type: SiteQuality
SIO_000300: 3.719643e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.297e1

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 1747
bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.720172e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 7.696e0

QD
type: SiteQuality
SIO_000300: 1.657e1

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.861e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.86e-1

GenotypeQuality
all individuals: 166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 1074
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e-1

DP
type: SiteQuality
SIO_000300: 3.721635e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.877e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

FS
type: SiteQuality
SIO_000300: 5.887e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

QD
type: SiteQuality
SIO_000300: 9.42e0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44529
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GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

FS
type: SiteQuality
SIO_000300: 1.038e0

VQSLOD
type: SiteQuality
SIO_000300: -1.948e-1

MQ
type: SiteQuality
SIO_000300: 5.91e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.24e-1

QD
type: SiteQuality
SIO_000300: 1.312e1

DP
type: SiteQuality
SIO_000300: 3.724436e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.78e-1

GenotypeQuality
all individuals: 44538
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4831
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 1915
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.468e0

DP
type: SiteQuality
SIO_000300: 3.725501e6

FS
type: SiteQuality
SIO_000300: 1.3184e1

MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.647e1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 4849
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variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2527
bin: 6.75e1
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GenotypeQuality
all individuals: 44540
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505389293671343e-5
allele num: 66428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.389e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 2.905e0

QD
type: SiteQuality
SIO_000300: 1.639e1

DP
type: SiteQuality
SIO_000300: 3.725906e6

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 162

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 76

GenotypeQuality
all individuals: 50043
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variant carriers: 46477

GenotypeQuality
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bin: 6.25e1
variant carriers: 119

GenotypeQuality
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variant carriers: 122

GenotypeQuality
all individuals: 79
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variant carriers: 73

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 56

GenotypeQuality
all individuals: 71
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variant carriers: 64

GenotypeQuality
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GenotypeQuality
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variant carriers: 82

GenotypeQuality
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bin: 8.25e1
variant carriers: 175

GenotypeQuality
all individuals: 660
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variant carriers: 145

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 95

GenotypeQuality
all individuals: 740
bin: 7.25e1
variant carriers: 90

European (Finnish)
type: Population
allele count: 4607
allele frequency: 6.98877427184466e-1
allele num: 6592
num of homozygotes: 1604

Other
type: Population
allele count: 577
allele frequency: 6.411111111111111e-1
allele num: 900
num of homozygotes: 182

African
type: Population
allele count: 2619
allele frequency: 2.528480401621935e-1
allele num: 10358
num of homozygotes: 324

East Asian
type: Population
allele count: 2773
allele frequency: 3.214699744957106e-1
allele num: 8626
num of homozygotes: 426

European (Non-Finnish)
type: Population
allele count: 44427
allele frequency: 6.699086220935493e-1
allele num: 66318
num of homozygotes: 14854

South Asian
type: Population
allele count: 10435
allele frequency: 6.331149132386846e-1
allele num: 16482
num of homozygotes: 3334

Latino
type: Population
allele count: 4054
allele frequency: 3.515435310440513e-1
allele num: 11532
num of homozygotes: 729

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 5.094544e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

FS
type: SiteQuality
SIO_000300: 6.195e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.429999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 2.405e1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 764
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 702
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 3216
bin: 6.25e1
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GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.716049382716049e-4
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.166e1

FS
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 5.104826e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.271e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: -3.19e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1