13-42783452-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783452
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783452
    reference: chr 13
allele count: 1
allele frequency: 8.608222574202878e-6
allele num: 116168
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2716-15T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2716-15T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2308-15T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3142-15T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.1981-15T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2716-15T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2308-15T>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40065
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

13-42783453-T-TTTATTTTATTTGTACTCTAAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783453
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783475
    reference: chr 13
allele count: 1
allele frequency: 8.604815254616483e-6
allele num: 116214
alternate allele: TTTATTTTATTTGTACTCTAAAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2586
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

13-42783471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783471
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783471
    reference: chr 13
allele count: 11
allele frequency: 9.258791643519688e-5
allele num: 118806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2720G>A
  hgvsp: ENSP00000261491.4:p.Arg907His
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2720G>A
  hgvsp: ENSP00000440823.1:p.Arg907His
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2720G>A
  hgvsp: ENSP00000337572.4:p.Arg907His
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3146G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2312G>A
  hgvsp: ENSP00000445114.1:p.Arg771His
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2312G>A
  hgvsp: ENSP00000368576.2:p.Arg771His
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.1985G>A
  hgvsp: ENSP00000441308.1:p.Arg662His
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg907His
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

13-42783474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783474
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783474
    reference: chr 13
allele count: 1
allele frequency: 8.386166180269028e-6
allele num: 119244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2723C>T
  hgvsp: ENSP00000440823.1:p.Thr908Ile
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.1988C>T
  hgvsp: ENSP00000441308.1:p.Thr663Ile
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2315C>T
  hgvsp: ENSP00000368576.2:p.Thr772Ile
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3149C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2315C>T
  hgvsp: ENSP00000445114.1:p.Thr772Ile
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2723C>T
  hgvsp: ENSP00000337572.4:p.Thr908Ile
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2723C>T
  hgvsp: ENSP00000261491.4:p.Thr908Ile
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr908Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

13-42783475-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783475
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783475
    reference: chr 13
allele count: 1
allele frequency: 8.373386029842748e-6
allele num: 119426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3150A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2316A>G
  hgvsp: ENST00000536612.1:c.2316A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2316A>G
  hgvsp: ENST00000379274.2:c.2316A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2724A>G
  hgvsp: ENST00000261491.5:c.2724A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.1989A>G
  hgvsp: ENST00000538674.1:c.1989A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2724A>G
  hgvsp: ENST00000337343.4:c.2724A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2724A>G
  hgvsp: ENST00000540693.1:c.2724A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr908Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

13-42783488-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783488
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783488
    reference: chr 13
allele count: 9
allele frequency: 7.484531967267647e-5
allele num: 120248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2737A>G
  hgvsp: ENSP00000440823.1:p.Ile913Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2329A>G
  hgvsp: ENSP00000368576.2:p.Ile777Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2737A>G
  hgvsp: ENSP00000261491.4:p.Ile913Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2329A>G
  hgvsp: ENSP00000445114.1:p.Ile777Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3163A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2002A>G
  hgvsp: ENSP00000441308.1:p.Ile668Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2737A>G
  hgvsp: ENSP00000337572.4:p.Ile913Val
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28387
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43589
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile913Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

13-42783499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783499
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783499
    reference: chr 13
allele count: 1
allele frequency: 8.291873963515755e-6
allele num: 120600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2013C>T
  hgvsp: ENST00000538674.1:c.2013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2748C>T
  hgvsp: ENST00000337343.4:c.2748C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2340C>T
  hgvsp: ENST00000379274.2:c.2340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3174C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2748C>T
  hgvsp: ENST00000261491.5:c.2748C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2748C>T
  hgvsp: ENST00000540693.1:c.2748C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2340C>T
  hgvsp: ENST00000536612.1:c.2340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43870
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp916Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

13-42783513-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783513
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783513
    reference: chr 13
allele count: 1
allele frequency: 8.273899157717065e-6
allele num: 120862
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2762T>C
  hgvsp: ENSP00000440823.1:p.Val921Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3188T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2762T>C
  hgvsp: ENSP00000261491.4:p.Val921Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2762T>C
  hgvsp: ENSP00000337572.4:p.Val921Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2027T>C
  hgvsp: ENSP00000441308.1:p.Val676Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2354T>C
  hgvsp: ENSP00000368576.2:p.Val785Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2354T>C
  hgvsp: ENSP00000445114.1:p.Val785Ala
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val921Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD

13-42783532-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783532
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783532
    reference: chr 13
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2781G>A
  hgvsp: ENST00000261491.5:c.2781G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2781G>A
  hgvsp: ENST00000337343.4:c.2781G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3207G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2781G>A
  hgvsp: ENST00000540693.1:c.2781G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2373G>A
  hgvsp: ENST00000536612.1:c.2373G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2373G>A
  hgvsp: ENST00000379274.2:c.2373G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2046G>A
  hgvsp: ENST00000538674.1:c.2046G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44029
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala927Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

13-42783538-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783538
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783538
    reference: chr 13
allele count: 3
allele frequency: 2.483525944567701e-5
allele num: 120796
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2787T>A
  hgvsp: ENST00000337343.4:c.2787T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2787T>A
  hgvsp: ENST00000261491.5:c.2787T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3213T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2787T>A
  hgvsp: ENST00000540693.1:c.2787T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2379T>A
  hgvsp: ENST00000379274.2:c.2379T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2379T>A
  hgvsp: ENST00000536612.1:c.2379T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2052T>A
  hgvsp: ENST00000538674.1:c.2052T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val929Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-42783543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783543
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783543
    reference: chr 13
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2792C>T
  hgvsp: ENSP00000440823.1:p.Pro931Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2792C>T
  hgvsp: ENSP00000261491.4:p.Pro931Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2384C>T
  hgvsp: ENSP00000368576.2:p.Pro795Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2057C>T
  hgvsp: ENSP00000441308.1:p.Pro686Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3218C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2792C>T
  hgvsp: ENSP00000337572.4:p.Pro931Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2384C>T
  hgvsp: ENSP00000445114.1:p.Pro795Leu
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43786
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro931Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

13-42783550-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783550
    reference: chr 13
allele count: 2
allele frequency: 1.658374792703151e-5
allele num: 120600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3225G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2799G>A
  hgvsp: ENST00000261491.5:c.2799G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2799G>A
  hgvsp: ENST00000337343.4:c.2799G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2799G>A
  hgvsp: ENST00000540693.1:c.2799G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2391G>A
  hgvsp: ENST00000536612.1:c.2391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2064G>A
  hgvsp: ENST00000538674.1:c.2064G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2391G>A
  hgvsp: ENST00000379274.2:c.2391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43818
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly933Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-42783550-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783550
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783550
    reference: chr 13
allele count: 1
allele frequency: 8.291873963515755e-6
allele num: 120600
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2799G>C
  hgvsp: ENST00000261491.5:c.2799G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2799G>C
  hgvsp: ENST00000540693.1:c.2799G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2391G>C
  hgvsp: ENST00000536612.1:c.2391G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2799G>C
  hgvsp: ENST00000337343.4:c.2799G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2064G>C
  hgvsp: ENST00000538674.1:c.2064G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2391G>C
  hgvsp: ENST00000379274.2:c.2391G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3225G>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly933Gly
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

13-42783553-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783553
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783553
    reference: chr 13
allele count: 1
allele frequency: 8.296001327360212e-6
allele num: 120540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2394T>A
  hgvsp: ENST00000536612.1:c.2394T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2802T>A
  hgvsp: ENST00000337343.4:c.2802T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3228T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2802T>A
  hgvsp: ENST00000261491.5:c.2802T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2394T>A
  hgvsp: ENST00000379274.2:c.2394T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2067T>A
  hgvsp: ENST00000538674.1:c.2067T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2802T>A
  hgvsp: ENST00000540693.1:c.2802T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43805
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile934Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-42783556-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783556
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783556
    reference: chr 13
allele count: 3
allele frequency: 2.491652962575373e-5
allele num: 120402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3231C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2805C>G
  hgvsp: ENSP00000440823.1:p.Ile935Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2397C>G
  hgvsp: ENSP00000368576.2:p.Ile799Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2805C>G
  hgvsp: ENSP00000337572.4:p.Ile935Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2397C>G
  hgvsp: ENSP00000445114.1:p.Ile799Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2805C>G
  hgvsp: ENSP00000261491.4:p.Ile935Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2070C>G
  hgvsp: ENSP00000441308.1:p.Ile690Met
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43456
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile935Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

13-42783564-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783564
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783564
    reference: chr 13
allele count: 3
allele frequency: 2.49617253544565e-5
allele num: 120184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3239T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2405T>C
  hgvsp: ENSP00000368576.2:p.Val802Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2813T>C
  hgvsp: ENSP00000261491.4:p.Val938Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2078T>C
  hgvsp: ENSP00000441308.1:p.Val693Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2813T>C
  hgvsp: ENSP00000440823.1:p.Val938Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2813T>C
  hgvsp: ENSP00000337572.4:p.Val938Ala
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2405T>C
  hgvsp: ENSP00000445114.1:p.Val802Ala
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1649
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val938Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

13-42783579-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783579
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783579
    reference: chr 13
allele count: 1
allele frequency: 8.400678774845007e-6
allele num: 119038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2828C>G
  hgvsp: ENSP00000261491.4:p.Ala943Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2093C>G
  hgvsp: ENSP00000441308.1:p.Ala698Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2420C>G
  hgvsp: ENSP00000445114.1:p.Ala807Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3254C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2828C>G
  hgvsp: ENSP00000440823.1:p.Ala943Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2828C>G
  hgvsp: ENSP00000337572.4:p.Ala943Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2420C>G
  hgvsp: ENSP00000368576.2:p.Ala807Gly
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala943Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

13-42783619-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783619
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783619
    reference: chr 13
allele count: 1
allele frequency: 8.996689218367641e-6
allele num: 111152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2115+18T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2442+18T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2850+18T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3276+18T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2442+18T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2850+18T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2850+18T>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

13-42783620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42783620
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42783620
    reference: chr 13
allele count: 1
allele frequency: 9.022990579997834e-6
allele num: 110828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2850+19C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2115+19C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3276+19C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2850+19C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2442+19C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2850+19C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2442+19C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20536
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12054
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29265
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

13-42784688-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784688
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784688
    reference: chr 13
allele count: 4
allele frequency: 3.43147347471004e-5
allele num: 116568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-50G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-50G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-50G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-50G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-50G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-50G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-50G>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21378
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-42784689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784689
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784689
    reference: chr 13
allele count: 1
allele frequency: 8.572359284722342e-6
allele num: 116654
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-49A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-49A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-49A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-49A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-49A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-49A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-49A>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2416
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

13-42784693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784693
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784693
    reference: chr 13
allele count: 1
allele frequency: 8.572359284722342e-6
allele num: 116654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-45C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-45C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-45C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-45C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-45C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-45C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-45C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

13-42784703-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784703
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784703
    reference: chr 13
allele count: 1
allele frequency: 8.555051758063135e-6
allele num: 116890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-35A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-35A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-35A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-35A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-35A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-35A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-35A>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

13-42784707-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784707
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784707
    reference: chr 13
allele count: 2
allele frequency: 1.708817498291182e-5
allele num: 117040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-31A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-31A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-31A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-31A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-31A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-31A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-31A>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21907
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9206
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

13-42784714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784714
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784714
    reference: chr 13
allele count: 13
allele frequency: 1.108912242391156e-4
allele num: 117232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-24C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22064
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9557
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37838
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

13-42784715-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784715
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784715
    reference: chr 13
allele count: 2
allele frequency: 1.702301511643742e-5
allele num: 117488
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-23G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-23G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-23G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-23G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-23G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-23G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-23G>A
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38121
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2245
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

13-42784722-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784722
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784722
    reference: chr 13
allele count: 27
allele frequency: 2.281792982218917e-4
allele num: 118328
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-16T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-16T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-16T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-16T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-16T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-16T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-16T>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15949
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39101
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

13-42784724-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784724
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784724
    reference: chr 13
allele count: 1
allele frequency: 8.437394532568342e-6
allele num: 118520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-14T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-14T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-14T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-14T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-14T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-14T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-14T>A
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9326
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

13-42784726-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784726
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784726
    reference: chr 13
allele count: 1
allele frequency: 8.423464402439436e-6
allele num: 118716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-12G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-12G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-12G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-12G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-12G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-12G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-12G>A
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

13-42784726-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784726
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784726
    reference: chr 13
allele count: 1
allele frequency: 8.423464402439436e-6
allele num: 118716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-12G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-12G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-12G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-12G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-12G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-12G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-12G>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

13-42784730-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784730
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784730
    reference: chr 13
allele count: 1
allele frequency: 8.38940250675347e-6
allele num: 119198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2443-8T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2851-8T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3277-8T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2443-8T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2851-8T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2851-8T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2116-8T>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22395
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2851-8T>G
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

13-42784754-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784754
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784754
    reference: chr 13
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2867T>C
  hgvsp: ENSP00000440823.1:p.Leu956Pro
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2132T>C
  hgvsp: ENSP00000441308.1:p.Leu711Pro
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2867T>C
  hgvsp: ENSP00000261491.4:p.Leu956Pro
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2867T>C
  hgvsp: ENSP00000337572.4:p.Leu956Pro
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3293T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2459T>C
  hgvsp: ENSP00000445114.1:p.Leu820Pro
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2459T>C
  hgvsp: ENSP00000368576.2:p.Leu820Pro
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41511
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu956Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

13-42784775-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784775
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784775
    reference: chr 13
allele count: 3
allele frequency: 2.473981956424931e-5
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2480A>G
  hgvsp: ENSP00000368576.2:p.Gln827Arg
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2480A>G
  hgvsp: ENSP00000445114.1:p.Gln827Arg
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3314A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2888A>G
  hgvsp: ENSP00000261491.4:p.Gln963Arg
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2153A>G
  hgvsp: ENSP00000441308.1:p.Gln718Arg
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2888A>G
  hgvsp: ENSP00000440823.1:p.Gln963Arg
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2888A>G
  hgvsp: ENSP00000337572.4:p.Gln963Arg
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln963Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

13-42784781-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784781
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784781
    reference: chr 13
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2486G>A
  hgvsp: ENSP00000368576.2:p.Cys829Tyr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2894G>A
  hgvsp: ENSP00000261491.4:p.Cys965Tyr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2159G>A
  hgvsp: ENSP00000441308.1:p.Cys720Tyr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2894G>A
  hgvsp: ENSP00000337572.4:p.Cys965Tyr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3320G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2486G>A
  hgvsp: ENSP00000445114.1:p.Cys829Tyr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2894G>A
  hgvsp: ENSP00000440823.1:p.Cys965Tyr
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys965Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

13-42784801-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784801
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784801
    reference: chr 13
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3340C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2506C>T
  hgvsp: ENSP00000368576.2:p.Leu836Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2914C>T
  hgvsp: ENSP00000261491.4:p.Leu972Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2179C>T
  hgvsp: ENSP00000441308.1:p.Leu727Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2506C>T
  hgvsp: ENSP00000445114.1:p.Leu836Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2914C>T
  hgvsp: ENSP00000337572.4:p.Leu972Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2914C>T
  hgvsp: ENSP00000440823.1:p.Leu972Phe
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9567
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu972Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

13-42784804-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784804
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784804
    reference: chr 13
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3343C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2917C>T
  hgvsp: ENSP00000261491.4:p.Arg973Ter
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2509C>T
  hgvsp: ENSP00000368576.2:p.Arg837Ter
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2509C>T
  hgvsp: ENSP00000445114.1:p.Arg837Ter
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2917C>T
  hgvsp: ENSP00000440823.1:p.Arg973Ter
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2917C>T
  hgvsp: ENSP00000337572.4:p.Arg973Ter
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2182C>T
  hgvsp: ENSP00000441308.1:p.Arg728Ter
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg973Ter
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

13-42784805-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784805
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784805
    reference: chr 13
allele count: 4
allele frequency: 3.296902560044838e-5
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2918G>A
  hgvsp: ENSP00000440823.1:p.Arg973Gln
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2183G>A
  hgvsp: ENSP00000441308.1:p.Arg728Gln
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2918G>A
  hgvsp: ENSP00000261491.4:p.Arg973Gln
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2918G>A
  hgvsp: ENSP00000337572.4:p.Arg973Gln
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3344G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2510G>A
  hgvsp: ENSP00000445114.1:p.Arg837Gln
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2510G>A
  hgvsp: ENSP00000368576.2:p.Arg837Gln
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16064
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Arg973Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

13-42784815-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784815
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784815
    reference: chr 13
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2520G>A
  hgvsp: ENST00000536612.1:c.2520G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2520G>A
  hgvsp: ENST00000379274.2:c.2520G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2928G>A
  hgvsp: ENST00000261491.5:c.2928G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2928G>A
  hgvsp: ENST00000540693.1:c.2928G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2193G>A
  hgvsp: ENST00000538674.1:c.2193G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3354G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2928G>A
  hgvsp: ENST00000337343.4:c.2928G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu976Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

13-42784827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784827
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784827
    reference: chr 13
allele count: 3
allele frequency: 2.472962279082036e-5
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2532C>T
  hgvsp: ENST00000379274.2:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2940C>T
  hgvsp: ENST00000261491.5:c.2940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3366C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2940C>T
  hgvsp: ENST00000337343.4:c.2940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2205C>T
  hgvsp: ENST00000538674.1:c.2205C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2940C>T
  hgvsp: ENST00000540693.1:c.2940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2532C>T
  hgvsp: ENST00000536612.1:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9569
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His980His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

13-42784828-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784828
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784828
    reference: chr 13
allele count: 11
allele frequency: 9.067976851928181e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2941G>A
  hgvsp: ENSP00000337572.4:p.Ala981Thr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2941G>A
  hgvsp: ENSP00000261491.4:p.Ala981Thr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2206G>A
  hgvsp: ENSP00000441308.1:p.Ala736Thr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2533G>A
  hgvsp: ENSP00000445114.1:p.Ala845Thr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2533G>A
  hgvsp: ENSP00000368576.2:p.Ala845Thr
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3367G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2941G>A
  hgvsp: ENSP00000440823.1:p.Ala981Thr
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9565
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala981Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

13-42784833-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784833
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784833
    reference: chr 13
allele count: 2
allele frequency: 1.648695881557688e-5
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2946T>G
  hgvsp: ENSP00000440823.1:p.Ile982Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2946T>G
  hgvsp: ENSP00000337572.4:p.Ile982Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2538T>G
  hgvsp: ENSP00000368576.2:p.Ile846Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3372T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2211T>G
  hgvsp: ENSP00000441308.1:p.Ile737Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2538T>G
  hgvsp: ENSP00000445114.1:p.Ile846Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2946T>G
  hgvsp: ENSP00000261491.4:p.Ile982Met
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2369
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile982Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

13-42784836-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784836
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784836
    reference: chr 13
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2214C>T
  hgvsp: ENST00000538674.1:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2541C>T
  hgvsp: ENST00000379274.2:c.2541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2949C>T
  hgvsp: ENST00000337343.4:c.2949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2949C>T
  hgvsp: ENST00000261491.5:c.2949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3375C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2949C>T
  hgvsp: ENST00000540693.1:c.2949C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2541C>T
  hgvsp: ENST00000536612.1:c.2541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9567
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp983Asp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-42784837-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784837
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784837
    reference: chr 13
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3376T>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2950T>A
  hgvsp: ENSP00000337572.4:p.Leu984Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2542T>A
  hgvsp: ENSP00000368576.2:p.Leu848Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2950T>A
  hgvsp: ENSP00000261491.4:p.Leu984Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2950T>A
  hgvsp: ENSP00000440823.1:p.Leu984Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2542T>A
  hgvsp: ENSP00000445114.1:p.Leu848Met
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2215T>A
  hgvsp: ENSP00000441308.1:p.Leu739Met
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu984Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

13-42784837-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784837
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784837
    reference: chr 13
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2542T>C
  hgvsp: ENST00000379274.2:c.2542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2950T>C
  hgvsp: ENST00000540693.1:c.2950T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2950T>C
  hgvsp: ENST00000261491.5:c.2950T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2215T>C
  hgvsp: ENST00000538674.1:c.2215T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2542T>C
  hgvsp: ENST00000536612.1:c.2542T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2950T>C
  hgvsp: ENST00000337343.4:c.2950T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3376T>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu984Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

13-42784841-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784841
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784841
    reference: chr 13
allele count: 2
allele frequency: 1.648858989579211e-5
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2954C>G
  hgvsp: ENSP00000261491.4:p.Ala985Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3380C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2954C>G
  hgvsp: ENSP00000440823.1:p.Ala985Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2546C>G
  hgvsp: ENSP00000445114.1:p.Ala849Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2546C>G
  hgvsp: ENSP00000368576.2:p.Ala849Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2219C>G
  hgvsp: ENSP00000441308.1:p.Ala740Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2954C>G
  hgvsp: ENSP00000337572.4:p.Ala985Gly
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9564
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala985Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

13-42784850-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784850
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784850
    reference: chr 13
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3389A>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2963A>G
  hgvsp: ENSP00000261491.4:p.Glu988Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2555A>G
  hgvsp: ENSP00000445114.1:p.Glu852Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2228A>G
  hgvsp: ENSP00000441308.1:p.Glu743Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2963A>G
  hgvsp: ENSP00000337572.4:p.Glu988Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2963A>G
  hgvsp: ENSP00000440823.1:p.Glu988Gly
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2555A>G
  hgvsp: ENSP00000368576.2:p.Glu852Gly
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9561
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu988Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

13-42784854-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784854
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784854
    reference: chr 13
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2559G>A
  hgvsp: ENST00000379274.2:c.2559G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2232G>A
  hgvsp: ENST00000538674.1:c.2232G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2967G>A
  hgvsp: ENST00000337343.4:c.2967G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2967G>A
  hgvsp: ENST00000261491.5:c.2967G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3393G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2559G>A
  hgvsp: ENST00000536612.1:c.2559G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2967G>A
  hgvsp: ENST00000540693.1:c.2967G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41811
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val989Val
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

13-42784856-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784856
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784856
    reference: chr 13
allele count: 8
allele frequency: 6.598264656395368e-5
allele num: 121244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2969C>T
  hgvsp: ENSP00000440823.1:p.Ser990Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2234C>T
  hgvsp: ENSP00000441308.1:p.Ser745Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2969C>T
  hgvsp: ENSP00000337572.4:p.Ser990Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3395C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2969C>T
  hgvsp: ENSP00000261491.4:p.Ser990Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2561C>T
  hgvsp: ENSP00000445114.1:p.Ser854Leu
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2561C>T
  hgvsp: ENSP00000368576.2:p.Ser854Leu
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser990Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

13-42784857-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784857
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784857
    reference: chr 13
allele count: 5
allele frequency: 4.124255571869278e-5
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2970G>A
  hgvsp: ENST00000261491.5:c.2970G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2562G>A
  hgvsp: ENST00000379274.2:c.2562G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2235G>A
  hgvsp: ENST00000538674.1:c.2235G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2562G>A
  hgvsp: ENST00000536612.1:c.2562G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3396G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2970G>A
  hgvsp: ENST00000540693.1:c.2970G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2970G>A
  hgvsp: ENST00000337343.4:c.2970G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser990Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

13-42784867-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784867
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784867
    reference: chr 13
allele count: 436
allele frequency: 3.598072225523206e-3
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2572C>T
  hgvsp: ENST00000536612.1:c.2572C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2980C>T
  hgvsp: ENST00000261491.5:c.2980C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2572C>T
  hgvsp: ENST00000379274.2:c.2572C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2980C>T
  hgvsp: ENST00000540693.1:c.2980C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2245C>T
  hgvsp: ENST00000538674.1:c.2245C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2980C>T
  hgvsp: ENST00000337343.4:c.2980C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3406C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 4.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 23085
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12271
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu994Leu
num of homozygotes: 6
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

13-42784869-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784869
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784869
    reference: chr 13
allele count: 7
allele frequency: 5.777007510109763e-5
allele num: 121170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2574A>G
  hgvsp: ENST00000536612.1:c.2574A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2982A>G
  hgvsp: ENST00000261491.5:c.2982A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2982A>G
  hgvsp: ENST00000540693.1:c.2982A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2982A>G
  hgvsp: ENST00000337343.4:c.2982A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2574A>G
  hgvsp: ENST00000379274.2:c.2574A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2247A>G
  hgvsp: ENST00000538674.1:c.2247A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3408A>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16149
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9593
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1168
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41825
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu994Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

13-42784874-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784874
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784874
    reference: chr 13
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2252C>T
  hgvsp: ENSP00000441308.1:p.Ser751Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2579C>T
  hgvsp: ENSP00000445114.1:p.Ser860Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2987C>T
  hgvsp: ENSP00000440823.1:p.Ser996Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2987C>T
  hgvsp: ENSP00000337572.4:p.Ser996Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2987C>T
  hgvsp: ENSP00000261491.4:p.Ser996Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2579C>T
  hgvsp: ENSP00000368576.2:p.Ser860Phe
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3413C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9561
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser996Phe
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

13-42784880-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784880
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784880
    reference: chr 13
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2585C>T
  hgvsp: ENSP00000368576.2:p.Ala862Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2258C>T
  hgvsp: ENSP00000441308.1:p.Ala753Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.2993C>T
  hgvsp: ENSP00000261491.4:p.Ala998Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.2993C>T
  hgvsp: ENSP00000440823.1:p.Ala998Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2585C>T
  hgvsp: ENSP00000445114.1:p.Ala862Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.2993C>T
  hgvsp: ENSP00000337572.4:p.Ala998Val
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3419C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala998Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

13-42784890-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784890
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784890
    reference: chr 13
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3003G>A
  hgvsp: ENST00000337343.4:c.3003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3003G>A
  hgvsp: ENST00000261491.5:c.3003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3003G>A
  hgvsp: ENST00000540693.1:c.3003G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2595G>A
  hgvsp: ENST00000379274.2:c.2595G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2268G>A
  hgvsp: ENST00000538674.1:c.2268G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3429G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2595G>A
  hgvsp: ENST00000536612.1:c.2595G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu1001Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

13-42784899-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784899
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784899
    reference: chr 13
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3012T>C
  hgvsp: ENST00000337343.4:c.3012T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2604T>C
  hgvsp: ENST00000536612.1:c.2604T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2277T>C
  hgvsp: ENST00000538674.1:c.2277T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3012T>C
  hgvsp: ENST00000540693.1:c.3012T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2604T>C
  hgvsp: ENST00000379274.2:c.2604T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3438T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3012T>C
  hgvsp: ENST00000261491.5:c.3012T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
hgvs: c.3012T>C
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: T
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

13-42784907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784907
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784907
    reference: chr 13
allele count: 2
allele frequency: 1.666722224074136e-5
allele num: 119996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+6G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+6G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+6G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+6G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+6G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+6G>A
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+6G>A
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22607
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: c.3014+6G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

13-42784907-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784907
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784907
    reference: chr 13
allele count: 1
allele frequency: 8.333611120370679e-6
allele num: 119996
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+6G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+6G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+6G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+6G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+6G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+6G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+6G>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 7.25e1
  variant carriers: 0
hgvs: c.3014+6G>C
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

13-42784912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784912
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784912
    reference: chr 13
allele count: 1
allele frequency: 8.345155637152633e-6
allele num: 119830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+11C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+11C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+11C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+11C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+11C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+11C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+11C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38904
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

13-42784913-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784913
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784913
    reference: chr 13
allele count: 1
allele frequency: 8.349475652928997e-6
allele num: 119768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+12T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+12T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+12T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+12T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+12T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+12T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+12T>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-42784919-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784919
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784919
    reference: chr 13
allele count: 2
allele frequency: 1.675518992007774e-5
allele num: 119366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+18C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+18C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+18C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+18C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+18C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+18C>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+18C>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37092
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

13-42784931-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784931
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784930
    reference: chr 13
allele count: 1
allele frequency: 8.429997302400863e-6
allele num: 118624
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+33delG
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+33delG
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+33delG
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+33delG
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+33delG
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+33delG
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+33delG
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6929
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: TG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

13-42784939-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784939
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784939
    reference: chr 13
allele count: 1
allele frequency: 8.482627578718784e-6
allele num: 117888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+38G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+38G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+38G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+38G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+38G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+38G>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+38G>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26060
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4619
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-42784942-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42784942
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42784942
    reference: chr 13
allele count: 6
allele frequency: 5.124175861715574e-5
allele num: 117092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3014+41G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3440+41G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3014+41G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2606+41G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2606+41G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3014+41G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2279+41G>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13917
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10964
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3957
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

13-42788595-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788595
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788595
    reference: chr 13
allele count: 1
allele frequency: 8.707615680674318e-6
allele num: 114842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-48C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-48C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-48C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-48C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-48C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-48C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-48C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18440
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4943
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3837
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-42788601-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788601
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788601
    reference: chr 13
allele count: 1
allele frequency: 8.645881966419394e-6
allele num: 115662
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-42T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-42T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-42T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-42T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-42T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-42T>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-42T>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11316
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/13-42788607-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788607
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788607
    reference: chr 13
allele count: 1
allele frequency: 8.592984687301287e-6
allele num: 116374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-36A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-36A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-36A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-36A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-36A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-36A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-36A>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12295
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39838
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

13-42788611-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788611
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788611
    reference: chr 13
allele count: 1
allele frequency: 8.541898009737763e-6
allele num: 117070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-32T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-32T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-32T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-32T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-32T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-32T>G
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-32T>G
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/13-42788616-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788616
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788616
    reference: chr 13
allele count: 6
allele frequency: 5.077344887113699e-5
allele num: 118172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-27A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-27A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-27A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-27A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-27A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-27A>C
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-27A>C
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD

13-42788616-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788616
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788616
    reference: chr 13
allele count: 1
allele frequency: 8.462241478522831e-6
allele num: 118172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-27A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-27A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-27A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-27A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-27A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-27A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-27A>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

13-42788619-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788619
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788619
    reference: chr 13
allele count: 1
allele frequency: 8.405197774303629e-6
allele num: 118974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-24C>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-24C>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

13-42788620-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788620
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788620
    reference: chr 13
allele count: 2
allele frequency: 1.677430176968884e-5
allele num: 119230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-23A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-23A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-23A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-23A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-23A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-23A>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-23A>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14035
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4700
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

13-42788624-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42788624
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 42788624
    reference: chr 13
allele count: 1
allele frequency: 8.338753523123364e-6
allele num: 119922
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000337572
  ensembl transcript: ENST00000337343
  gene symbol: DGKH
  hgvsc: ENST00000337343.4:c.3015-19G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000440823
  ensembl transcript: ENST00000540693
  gene symbol: DGKH
  hgvsc: ENST00000540693.1:c.3015-19G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl transcript: ENST00000498255
  gene symbol: DGKH
  hgvsc: ENST00000498255.2:n.3441-19G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000441308
  ensembl transcript: ENST00000538674
  gene symbol: DGKH
  hgvsc: ENST00000538674.1:c.2280-19G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000445114
  ensembl transcript: ENST00000536612
  gene symbol: DGKH
  hgvsc: ENST00000536612.1:c.2607-19G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000261491
  ensembl transcript: ENST00000261491
  gene symbol: DGKH
  hgvsc: ENST00000261491.5:c.3015-19G>T
  variant of: http://identifiers.org/hgnc/2854
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102780
  ensembl protein: ENSP00000368576
  ensembl transcript: ENST00000379274
  gene symbol: DGKH
  hgvsc: ENST00000379274.2:c.2607-19G>T
  variant of: http://identifiers.org/hgnc/2854
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 871
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7987
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532050496384361e-5
allele num: 65272
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.886e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

DP
type: SiteQuality
SIO_000300: 1.693633e6

FS
type: SiteQuality
SIO_000300: 2.475e0

QD
type: SiteQuality
SIO_000300: 1.467e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

MQ
type: SiteQuality
SIO_000300: 5.823e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: -1.067e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531581204435459e-5
allele num: 65292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13256
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.592e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.199e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

VQSLOD
type: SiteQuality
SIO_000300: -1.308e0

MQ
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SIO_000300: 5.398e1

QD
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 1.198e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.694655e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.36578851523613e-4
allele num: 65896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.953506544246923e-4
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 1.72875e6

QD
type: SiteQuality
SIO_000300: 1.206e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514921981517952e-5
allele num: 66010
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

DP
type: SiteQuality
SIO_000300: 1.733096e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

QD
type: SiteQuality
SIO_000300: 1.115e1

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

FS
type: SiteQuality
SIO_000300: 2.169e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.165e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.692628650904033e-5
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.663e0

VQSLOD
type: SiteQuality
SIO_000300: 4.84e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

FS
type: SiteQuality
SIO_000300: 8.44e-1

DP
type: SiteQuality
SIO_000300: 1.734429e6

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
all individuals: 1748
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.344048653344917e-4
allele num: 16114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020782986950218e-5
allele num: 66208
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

FS
type: SiteQuality
SIO_000300: 5.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e-1

DP
type: SiteQuality
SIO_000300: 1.74433e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.312e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507567991316408e-5
allele num: 66332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 6.54e0

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.844e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.235e0

DP
type: SiteQuality
SIO_000300: 1.748785e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505117399157134e-5
allele num: 66440
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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South Asian
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allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8628
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.0790273556231e-5
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66420
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Other
type: Population
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allele num: 906
num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

QD
type: SiteQuality
SIO_000300: 6.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.482702577199907e-4
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

South Asian
type: Population
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MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -6.111e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.111e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.083465141744738e-5
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-2

DP
type: SiteQuality
SIO_000300: 1.748648e6

FS
type: SiteQuality
SIO_000300: 6.017e0

VQSLOD
type: SiteQuality
SIO_000300: -2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

QD
type: SiteQuality
SIO_000300: 3.87e0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21921482565228e-4
allele num: 16404
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.746339e6

FS
type: SiteQuality
SIO_000300: 3.266e0

QD
type: SiteQuality
SIO_000300: 1.23e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.598e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.598e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

FS
type: SiteQuality
SIO_000300: 3.266e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.746339e6

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2654
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 856
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 8.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.744888e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.37e-1

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2653
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1667
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.53802868034126e-5
allele num: 66108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

DP
type: SiteQuality
SIO_000300: 1.742632e6

FS
type: SiteQuality
SIO_000300: 4.114e0

QD
type: SiteQuality
SIO_000300: 1.139e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 297
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 316
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variant carriers: 0

GenotypeQuality
all individuals: 112
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variant carriers: 0

GenotypeQuality
all individuals: 43469
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variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65974
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.494060097833683e-4
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.738069e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

QD
type: SiteQuality
SIO_000300: 1.062e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.313928526329082e-5
allele num: 15838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.458e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 1.625e1

VQSLOD
type: SiteQuality
SIO_000300: -2.717e0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

DP
type: SiteQuality
SIO_000300: 1.718487e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.184e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.624220374220374e-5
allele num: 61568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

DP
type: SiteQuality
SIO_000300: 1.491295e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.903e1

FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.12e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 7.491759065028469e-5
allele num: 13348
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61438
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 3.776e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.27e0

VQSLOD
type: SiteQuality
SIO_000300: -4.192e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65458
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.481288076588338e-4
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

QD
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SIO_000300: 1.414e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

FS
type: SiteQuality
SIO_000300: 3.869e0

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

DP
type: SiteQuality
SIO_000300: 1.717143e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.113e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.57e-1

DP
type: SiteQuality
SIO_000300: 1.717529e6

QD
type: SiteQuality
SIO_000300: 1.325e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.12e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9141
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526857422053929e-5
allele num: 65494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13280
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.845e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.331e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.951e0

MQRankSum
type: SiteQuality
SIO_000300: 4.05e-1

QD
type: SiteQuality
SIO_000300: 8.77e0

VQSLOD
type: SiteQuality
SIO_000300: -2.787e0

DP
type: SiteQuality
SIO_000300: 1.721477e6

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.45489786789921e-5
allele num: 13414
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.198e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.663e0

DP
type: SiteQuality
SIO_000300: 1.732851e6

GenotypeQuality
all individuals: 711
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.048873441263453e-5
allele num: 65598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.03e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.16e1

DP
type: SiteQuality
SIO_000300: 1.737455e6

GenotypeQuality
all individuals: 1963
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9226
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 164
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GenotypeQuality
all individuals: 2408
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variant carriers: 13

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2176
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variant carriers: 0

GenotypeQuality
all individuals: 2239
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variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 5.129708339440129e-4
allele num: 13646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.569409327687575e-5
allele num: 65654
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.897990726429675e-4
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

QD
type: SiteQuality
SIO_000300: 1.161e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 8.54e-1

DP
type: SiteQuality
SIO_000300: 1.745663e6

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.653e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9255
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38
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GenotypeQuality
all individuals: 1183
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.656237929702588e-5
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516070345664039e-4
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65716
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.748048e6

FS
type: SiteQuality
SIO_000300: 9.038e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.26e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

MQRankSum
type: SiteQuality
SIO_000300: -3.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 27

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9312
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GenotypeQuality
all individuals: 395
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 27
allele frequency: 2.605171748359707e-3
allele num: 10364
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.59e-1

QD
type: SiteQuality
SIO_000300: 1.485e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515656734062869e-5
allele num: 65978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.76284e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 113
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514646632940535e-5
allele num: 66022
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.256e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

DP
type: SiteQuality
SIO_000300: 1.765789e6

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 100
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GenotypeQuality
all individuals: 389
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GenotypeQuality
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GenotypeQuality
all individuals: 2377
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2261
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GenotypeQuality
all individuals: 39511
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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Latino
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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ClippingRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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FS
type: SiteQuality
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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FS
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.50220608097968e-5
allele num: 66634
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11554
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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MQ
type: SiteQuality
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DP
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SIO_000300: 1.800016e6

FS
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

BaseQRankSum
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SIO_000300: -2.855e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.902e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66690
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Latino
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num of homozygotes: 0

African
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East Asian
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Other
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num of homozygotes: 0

South Asian
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allele num: 16504
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MQRankSum
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DP
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QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.708e0

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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Other
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BaseQRankSum
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FS
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele frequency: 1.49947518368571e-5
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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African
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MQRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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QD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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East Asian
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South Asian
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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SIO_000300: 1.88e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

South Asian
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allele count: 8
allele frequency: 4.847309743092584e-4
allele num: 16504
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11548
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.801075e6

FS
type: SiteQuality
SIO_000300: 1.108e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.64e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999130252226854e-5
allele num: 66686
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 1.12e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.800453e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
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African
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allele frequency: 0.0e0
allele num: 10406
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South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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QD
type: SiteQuality
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MQRankSum
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SIO_000300: -3.49e-1

InbreedingCoeff
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DP
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0974e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.002e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

DP
type: SiteQuality
SIO_000300: 1.800329e6

MQRankSum
type: SiteQuality
SIO_000300: -4.49e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.800329e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e0

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.0974e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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Other
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South Asian
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QD
type: SiteQuality
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DP
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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FS
type: SiteQuality
SIO_000300: 1.286e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

East Asian
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allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
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South Asian
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European (Finnish)
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allele count: 0
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Latino
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allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

Other
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.00294144130624e-5
allele num: 66634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.406e0

FS
type: SiteQuality
SIO_000300: 1.813e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

DP
type: SiteQuality
SIO_000300: 1.799392e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 427

GenotypeQuality
all individuals: 553
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GenotypeQuality
all individuals: 9506
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variant carriers: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

East Asian
type: Population
allele count: 314
allele frequency: 3.631737219523479e-2
allele num: 8646
num of homozygotes: 5

Latino
type: Population
allele count: 3
allele frequency: 2.599653379549393e-4
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.537870049980777e-3
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 99
allele frequency: 6.009469467038971e-3
allele num: 16474
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 5.14e0

DP
type: SiteQuality
SIO_000300: 1.813029e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.873e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 5.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
all individuals: 438
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GenotypeQuality
all individuals: 32
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.250151791135398e-4
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

DP
type: SiteQuality
SIO_000300: 1.795008e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 1.467e1

FS
type: SiteQuality
SIO_000300: 6.893e0

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.937e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

QD
type: SiteQuality
SIO_000300: 1.252e1

DP
type: SiteQuality
SIO_000300: 1.793659e6

FS
type: SiteQuality
SIO_000300: 8.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.11e-1

GenotypeQuality
all individuals: 9532
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variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2179
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GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.862e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.791182e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.31e-1

MQ
type: SiteQuality
SIO_000300: 5.881e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.379e1

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 122
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GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 2229
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GenotypeQuality
all individuals: 1156
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.735e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.56e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.785806e6

QD
type: SiteQuality
SIO_000300: 1.015e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.015e0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 128
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2174
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508841813024323e-5
allele num: 66276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
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QD
type: SiteQuality
SIO_000300: 1.634e1

FS
type: SiteQuality
SIO_000300: 2.191e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.776403e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.24750499001996e-4
allele num: 16032
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 906
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.760213e6

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.084e0

VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.02e-1

QD
type: SiteQuality
SIO_000300: 1.05e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
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allele num: 16032
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.513454611496201e-5
allele num: 66074
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Latino
type: Population
allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
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East Asian
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allele num: 8606
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MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.54e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.05e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.02e-1

DP
type: SiteQuality
SIO_000300: 1.760213e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514921981517952e-5
allele num: 66010
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Other
type: Population
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African
type: Population
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allele frequency: 0.0e0
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East Asian
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South Asian
type: Population
allele count: 0
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DP
type: SiteQuality
SIO_000300: 1.752037e6

MQRankSum
type: SiteQuality
SIO_000300: 8.61e-1

FS
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.193e1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515978412467406e-5
allele num: 65964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.747362e6

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.229e1

FS
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.182e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.941370607649e-4
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15838
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.876e1

DP
type: SiteQuality
SIO_000300: 1.727774e6

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

FS
type: SiteQuality
SIO_000300: 2.966e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

GenotypeQuality
all individuals: 494
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529285823520416e-5
allele num: 65390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15696
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 2.597e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

MQ
type: SiteQuality
SIO_000300: 6.039e1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 2.034e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

DP
type: SiteQuality
SIO_000300: 1.645855e6

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537893700787402e-5
allele num: 65024
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e0

QD
type: SiteQuality
SIO_000300: 1.63e1

DP
type: SiteQuality
SIO_000300: 1.550663e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.374e0

GenotypeQuality
all individuals: 1306
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20818
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 239
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 341
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variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.871668311944718e-5
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.73706362961129e-5
allele num: 64624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

FS
type: SiteQuality
SIO_000300: 1.089e0

DP
type: SiteQuality
SIO_000300: 1.489031e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.272e0

GenotypeQuality
all individuals: 259
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 641
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 182
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
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variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15068
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583330694448843e-5
allele num: 63158
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.34507e6

MQRankSum
type: SiteQuality
SIO_000300: -1.528e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e0

VQSLOD
type: SiteQuality
SIO_000300: -2.017e0

QD
type: SiteQuality
SIO_000300: 9.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.949e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.954e0

GenotypeQuality
all individuals: 966
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
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variant carriers: 0

GenotypeQuality
all individuals: 263
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variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.57410905427528e-5
allele num: 63528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
type: SiteQuality
SIO_000300: 1.394196e6

QD
type: SiteQuality
SIO_000300: 1.85e1

VQSLOD
type: SiteQuality
SIO_000300: -8.033e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.998e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 786
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variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56328164082041e-5
allele num: 63968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

FS
type: SiteQuality
SIO_000300: 4.058e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

QD
type: SiteQuality
SIO_000300: 1.752e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 1.454168e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

GenotypeQuality
all individuals: 4480
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 262
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GenotypeQuality
all individuals: 2770
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GenotypeQuality
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GenotypeQuality
all individuals: 630
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.537988311288834e-4
allele num: 6502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.119e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.481972e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

FS
type: SiteQuality
SIO_000300: 5.488e0

QD
type: SiteQuality
SIO_000300: 6.12e0

GenotypeQuality
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 2776
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 385
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GenotypeQuality
all individuals: 45307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.075598203850649e-5
allele num: 65028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.525471531817381e-4
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 1.513621e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.379999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeQuality
all individuals: 1529
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2776
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 952
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4526
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537799101925324e-5
allele num: 65028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

QD
type: SiteQuality
SIO_000300: 1.5e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 9.379999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.513621e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

GenotypeQuality
all individuals: 1019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46526
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526764176005374e-5
allele num: 65498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.7e-2

QD
type: SiteQuality
SIO_000300: 1.296e1

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 6.073e0

DP
type: SiteQuality
SIO_000300: 1.53117e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

GenotypeQuality
all individuals: 391
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47151
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.944390433599067e-4
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.487e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 1.535902e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1