15-85164319-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164319
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164319
    reference: chr 15
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.890G>A
  hgvsp: ENSP00000325123.6:p.Arg297Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.893G>A
  hgvsp: ENSP00000410198.2:p.Arg298Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+316G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.893G>A
  hgvsp: ENSP00000441855.1:p.Arg298Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+316G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.893G>A
  hgvsp: ENSP00000445451.1:p.Arg298Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+316G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.443G>A
  hgvsp: ENSP00000351257.3:p.Arg148Lys
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3420
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27900
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg298Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

15-85164320-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164320
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164320
    reference: chr 15
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+317G>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.894G>T
  hgvsp: ENSP00000410198.2:p.Arg298Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.444G>T
  hgvsp: ENSP00000351257.3:p.Arg148Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.891G>T
  hgvsp: ENSP00000325123.6:p.Arg297Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.894G>T
  hgvsp: ENSP00000445451.1:p.Arg298Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+317G>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.894G>T
  hgvsp: ENSP00000441855.1:p.Arg298Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+317G>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2985
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4886
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg298Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

15-85164326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164326
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164326
    reference: chr 15
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.900C>T
  hgvsp: ENST00000540894.1:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+323C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.900C>T
  hgvsp: ENST00000546148.1:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.450C>T
  hgvsp: ENST00000358472.3:c.450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+323C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.900C>T
  hgvsp: ENST00000448803.2:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.897C>T
  hgvsp: ENST00000327179.6:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+323C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27895
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His300His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

15-85164328-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164328
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164328
    reference: chr 15
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.452C>T
  hgvsp: ENSP00000351257.3:p.Thr151Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.902C>T
  hgvsp: ENSP00000410198.2:p.Thr301Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+325C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.902C>T
  hgvsp: ENSP00000441855.1:p.Thr301Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.902C>T
  hgvsp: ENSP00000445451.1:p.Thr301Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.899C>T
  hgvsp: ENSP00000325123.6:p.Thr300Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+325C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+325C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr301Met
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

15-85164329-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164329
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164329
    reference: chr 15
allele count: 20
allele frequency: 1.649620587264929e-4
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.903G>A
  hgvsp: ENST00000540894.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+326G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.903G>A
  hgvsp: ENST00000546148.1:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.900G>A
  hgvsp: ENST00000327179.6:c.900G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+326G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+326G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.903G>A
  hgvsp: ENST00000448803.2:c.903G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.453G>A
  hgvsp: ENST00000358472.3:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9089
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2618
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr301Thr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-85164354-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164354
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164354
    reference: chr 15
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+351G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.925G>A
  hgvsp: ENSP00000325123.6:p.Glu309Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.928G>A
  hgvsp: ENSP00000441855.1:p.Glu310Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.928G>A
  hgvsp: ENSP00000445451.1:p.Glu310Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.928G>A
  hgvsp: ENSP00000410198.2:p.Glu310Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.478G>A
  hgvsp: ENSP00000351257.3:p.Glu160Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+351G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+351G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11211
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu310Lys
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

15-85164355-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164355
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164355
    reference: chr 15
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+352A>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+352A>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.929A>T
  hgvsp: ENSP00000445451.1:p.Glu310Val
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.929A>T
  hgvsp: ENSP00000410198.2:p.Glu310Val
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.479A>T
  hgvsp: ENSP00000351257.3:p.Glu160Val
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.929A>T
  hgvsp: ENSP00000441855.1:p.Glu310Val
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.926A>T
  hgvsp: ENSP00000325123.6:p.Glu309Val
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+352A>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3729
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu310Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

15-85164356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164356
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164356
    reference: chr 15
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.930G>A
  hgvsp: ENST00000546148.1:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+353G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+353G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.927G>A
  hgvsp: ENST00000327179.6:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.930G>A
  hgvsp: ENST00000448803.2:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.480G>A
  hgvsp: ENST00000358472.3:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+353G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.930G>A
  hgvsp: ENST00000540894.1:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu310Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

15-85164362-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164362
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164362
    reference: chr 15
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+359C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.936C>G
  hgvsp: ENST00000546148.1:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+359C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.936C>G
  hgvsp: ENST00000540894.1:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.936C>G
  hgvsp: ENST00000448803.2:c.936C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.486C>G
  hgvsp: ENST00000358472.3:c.486C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+359C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.933C>G
  hgvsp: ENST00000327179.6:c.933C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly312Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

15-85164371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164371
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164371
    reference: chr 15
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+368C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.945C>T
  hgvsp: ENST00000448803.2:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.945C>T
  hgvsp: ENST00000540894.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.495C>T
  hgvsp: ENST00000358472.3:c.495C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.945C>T
  hgvsp: ENST00000546148.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+368C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+368C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.942C>T
  hgvsp: ENST00000327179.6:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2998
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe315Phe
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/15-85164390-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164390
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164390
    reference: chr 15
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+387A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.964A>C
  hgvsp: ENSP00000445451.1:p.Ile322Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+387A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.961A>C
  hgvsp: ENSP00000325123.6:p.Ile321Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.964A>C
  hgvsp: ENSP00000410198.2:p.Ile322Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.514A>C
  hgvsp: ENSP00000351257.3:p.Ile172Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+387A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.964A>C
  hgvsp: ENSP00000441855.1:p.Ile322Leu
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3728
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile322Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

15-85164397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164397
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164397
    reference: chr 15
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+394A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+394A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.968A>G
  hgvsp: ENSP00000325123.6:p.His323Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.971A>G
  hgvsp: ENSP00000441855.1:p.His324Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.971A>G
  hgvsp: ENSP00000445451.1:p.His324Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+394A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.971A>G
  hgvsp: ENSP00000410198.2:p.His324Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.521A>G
  hgvsp: ENSP00000351257.3:p.His174Arg
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4997
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His324Arg
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

15-85164399-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164399
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164399
    reference: chr 15
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.973C>G
  hgvsp: ENSP00000441855.1:p.Gln325Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.970C>G
  hgvsp: ENSP00000325123.6:p.Gln324Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+396C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.973C>G
  hgvsp: ENSP00000410198.2:p.Gln325Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.523C>G
  hgvsp: ENSP00000351257.3:p.Gln175Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.973C>G
  hgvsp: ENSP00000445451.1:p.Gln325Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+396C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+396C>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27843
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2996
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln325Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

15-85164403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164403
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164403
    reference: chr 15
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+400G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.974G>A
  hgvsp: ENSP00000325123.6:p.Arg325His
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+400G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.977G>A
  hgvsp: ENSP00000410198.2:p.Arg326His
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.527G>A
  hgvsp: ENSP00000351257.3:p.Arg176His
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.977G>A
  hgvsp: ENSP00000441855.1:p.Arg326His
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.977G>A
  hgvsp: ENSP00000445451.1:p.Arg326His
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+400G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11314
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg326His
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

15-85164410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164410
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164410
    reference: chr 15
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+407C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.984C>T
  hgvsp: ENST00000546148.1:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.984C>T
  hgvsp: ENST00000540894.1:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.984C>T
  hgvsp: ENST00000448803.2:c.984C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.534C>T
  hgvsp: ENST00000358472.3:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+407C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.981C>T
  hgvsp: ENST00000327179.6:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+407C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His328His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

15-85164430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164430
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164430
    reference: chr 15
allele count: 5
allele frequency: 4.118887570844866e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+427C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+427C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1001C>T
  hgvsp: ENSP00000325123.6:p.Ser334Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1004C>T
  hgvsp: ENSP00000410198.2:p.Ser335Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1004C>T
  hgvsp: ENSP00000445451.1:p.Ser335Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.554C>T
  hgvsp: ENSP00000351257.3:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+427C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1004C>T
  hgvsp: ENSP00000441855.1:p.Ser335Leu
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27840
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser335Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

15-85164431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164431
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164431
    reference: chr 15
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+428G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1005G>A
  hgvsp: ENST00000448803.2:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1002G>A
  hgvsp: ENST00000327179.6:c.1002G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+428G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1005G>A
  hgvsp: ENST00000540894.1:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1005G>A
  hgvsp: ENST00000546148.1:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.555G>A
  hgvsp: ENST00000358472.3:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+428G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser335Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-85164434-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164434
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164434
    reference: chr 15
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1008C>A
  hgvsp: ENSP00000445451.1:p.Cys336Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+431C>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1008C>A
  hgvsp: ENSP00000441855.1:p.Cys336Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1008C>A
  hgvsp: ENSP00000410198.2:p.Cys336Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.558C>A
  hgvsp: ENSP00000351257.3:p.Cys186Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1005C>A
  hgvsp: ENSP00000325123.6:p.Cys335Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+431C>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+431C>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys336Ter
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-85164437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164437
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164437
    reference: chr 15
allele count: 4
allele frequency: 3.295110056675893e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+434C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1011C>T
  hgvsp: ENST00000540894.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1011C>T
  hgvsp: ENST00000448803.2:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.561C>T
  hgvsp: ENST00000358472.3:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1011C>T
  hgvsp: ENST00000546148.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+434C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1008C>T
  hgvsp: ENST00000327179.6:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+434C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro337Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

15-85164438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164438
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164438
    reference: chr 15
allele count: 42
allele frequency: 3.459751556888201e-4
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1009G>A
  hgvsp: ENSP00000325123.6:p.Glu337Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+435G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1012G>A
  hgvsp: ENSP00000410198.2:p.Glu338Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1012G>A
  hgvsp: ENSP00000441855.1:p.Glu338Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.562G>A
  hgvsp: ENSP00000351257.3:p.Glu188Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+435G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+435G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1012G>A
  hgvsp: ENSP00000445451.1:p.Glu338Lys
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8621
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu338Lys
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

15-85164443-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164443
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164443
    reference: chr 15
allele count: 6
allele frequency: 4.942420797706717e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1014T>C
  hgvsp: ENST00000327179.6:c.1014T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1017T>C
  hgvsp: ENST00000546148.1:c.1017T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1017T>C
  hgvsp: ENST00000448803.2:c.1017T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.567T>C
  hgvsp: ENST00000358472.3:c.567T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+440T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1017T>C
  hgvsp: ENST00000540894.1:c.1017T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+440T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+440T>C
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27813
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4992
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys339Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

15-85164455-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164455
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164455
    reference: chr 15
allele count: 118
allele frequency: 9.720094235489876e-4
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+452T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+452T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1029T>C
  hgvsp: ENST00000546148.1:c.1029T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1029T>C
  hgvsp: ENST00000540894.1:c.1029T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1029T>C
  hgvsp: ENST00000448803.2:c.1029T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1026T>C
  hgvsp: ENST00000327179.6:c.1026T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+452T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.579T>C
  hgvsp: ENST00000358472.3:c.579T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8627
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3733
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11210
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe343Phe
num of homozygotes: 2
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-85164458-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164458
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164458
    reference: chr 15
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1029C>T
  hgvsp: ENST00000327179.6:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1032C>T
  hgvsp: ENST00000540894.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+455C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+455C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.582C>T
  hgvsp: ENST00000358472.3:c.582C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1032C>T
  hgvsp: ENST00000448803.2:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1032C>T
  hgvsp: ENST00000546148.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+455C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4995
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly344Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

15-85164461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164461
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164461
    reference: chr 15
allele count: 5
allele frequency: 4.118751853438334e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+458C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1035C>T
  hgvsp: ENST00000448803.2:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1035C>T
  hgvsp: ENST00000546148.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+458C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1035C>T
  hgvsp: ENST00000540894.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+458C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1032C>T
  hgvsp: ENST00000327179.6:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.585C>T
  hgvsp: ENST00000358472.3:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn345Asn
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

15-85164463-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164463
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164463
    reference: chr 15
allele count: 7
allele frequency: 5.766537606063102e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+460G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1037G>A
  hgvsp: ENSP00000410198.2:p.Arg346Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1037G>A
  hgvsp: ENSP00000441855.1:p.Arg346Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.587G>A
  hgvsp: ENSP00000351257.3:p.Arg196Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1034G>A
  hgvsp: ENSP00000325123.6:p.Arg345Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1037G>A
  hgvsp: ENSP00000445451.1:p.Arg346Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+460G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+460G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9178
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg346Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS

15-85164476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164476
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164476
    reference: chr 15
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1047C>T
  hgvsp: ENST00000327179.6:c.1047C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1050C>T
  hgvsp: ENST00000540894.1:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+473C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+473C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1050C>T
  hgvsp: ENST00000448803.2:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.600C>T
  hgvsp: ENST00000358472.3:c.600C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+473C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1050C>T
  hgvsp: ENST00000546148.1:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn350Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-85164478-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164478
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164478
    reference: chr 15
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1052C>A
  hgvsp: ENSP00000445451.1:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1049C>A
  hgvsp: ENSP00000325123.6:p.Thr350Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+475C>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1052C>A
  hgvsp: ENSP00000410198.2:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.602C>A
  hgvsp: ENSP00000351257.3:p.Thr201Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1052C>A
  hgvsp: ENSP00000441855.1:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+475C>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+475C>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr351Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

15-85164478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164478
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164478
    reference: chr 15
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+475C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1052C>T
  hgvsp: ENSP00000445451.1:p.Thr351Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.602C>T
  hgvsp: ENSP00000351257.3:p.Thr201Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+475C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1052C>T
  hgvsp: ENSP00000441855.1:p.Thr351Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1052C>T
  hgvsp: ENSP00000410198.2:p.Thr351Met
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+475C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1049C>T
  hgvsp: ENSP00000325123.6:p.Thr350Met
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr351Met
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

15-85164480-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164480
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164480
    reference: chr 15
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1054C>T
  hgvsp: ENSP00000410198.2:p.His352Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1051C>T
  hgvsp: ENSP00000325123.6:p.His351Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1054C>T
  hgvsp: ENSP00000441855.1:p.His352Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+477C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1054C>T
  hgvsp: ENSP00000445451.1:p.His352Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.604C>T
  hgvsp: ENSP00000351257.3:p.His202Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+477C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+477C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His352Tyr
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

15-85164486-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164486
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164486
    reference: chr 15
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1060G>C
  hgvsp: ENSP00000445451.1:p.Gly354Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1060G>C
  hgvsp: ENSP00000410198.2:p.Gly354Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+483G>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.610G>C
  hgvsp: ENSP00000351257.3:p.Gly204Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+483G>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1057G>C
  hgvsp: ENSP00000325123.6:p.Gly353Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1060G>C
  hgvsp: ENSP00000441855.1:p.Gly354Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+483G>C
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly354Arg
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-85164496-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164496
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164496
    reference: chr 15
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1067C>G
  hgvsp: ENSP00000325123.6:p.Thr356Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1070C>G
  hgvsp: ENSP00000445451.1:p.Thr357Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1070C>G
  hgvsp: ENSP00000441855.1:p.Thr357Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+493C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.620C>G
  hgvsp: ENSP00000351257.3:p.Thr207Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+493C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+493C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1070C>G
  hgvsp: ENSP00000410198.2:p.Thr357Ser
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3755
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr357Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-85164497-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164497
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164497
    reference: chr 15
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1071T>C
  hgvsp: ENST00000448803.2:c.1071T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1071T>C
  hgvsp: ENST00000546148.1:c.1071T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+494T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.621T>C
  hgvsp: ENST00000358472.3:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+494T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+494T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1068T>C
  hgvsp: ENST00000327179.6:c.1068T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1071T>C
  hgvsp: ENST00000540894.1:c.1071T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr357Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD

15-85164512-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164512
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164512
    reference: chr 15
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+509C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+509C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.636C>T
  hgvsp: ENST00000358472.3:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1086C>T
  hgvsp: ENST00000448803.2:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+509C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1086C>T
  hgvsp: ENST00000540894.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1086C>T
  hgvsp: ENST00000546148.1:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1083C>T
  hgvsp: ENST00000327179.6:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7869
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27765
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr362Tyr
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

15-85164527-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164527
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164527
    reference: chr 15
allele count: 71
allele frequency: 5.849687742020531e-4
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+524C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1101C>T
  hgvsp: ENST00000546148.1:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1101C>T
  hgvsp: ENST00000540894.1:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1098C>T
  hgvsp: ENST00000327179.6:c.1098C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.651C>T
  hgvsp: ENST00000358472.3:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1101C>T
  hgvsp: ENST00000448803.2:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+524C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+524C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 9.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7870
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys367Cys
num of homozygotes: 1
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

15-85164528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164528
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164528
    reference: chr 15
allele count: 11
allele frequency: 9.062448508815291e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1102G>A
  hgvsp: ENSP00000445451.1:p.Gly368Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.652G>A
  hgvsp: ENSP00000351257.3:p.Gly218Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1102G>A
  hgvsp: ENSP00000441855.1:p.Gly368Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1102G>A
  hgvsp: ENSP00000410198.2:p.Gly368Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+525G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+525G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+525G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1099G>A
  hgvsp: ENSP00000325123.6:p.Gly367Ser
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4976
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3742
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly368Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

15-85164530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164530
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164530
    reference: chr 15
allele count: 338
allele frequency: 2.784597386762453e-3
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+527C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1104C>T
  hgvsp: ENST00000546148.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1101C>T
  hgvsp: ENST00000327179.6:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1104C>T
  hgvsp: ENST00000448803.2:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.654C>T
  hgvsp: ENST00000358472.3:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+527C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1104C>T
  hgvsp: ENST00000540894.1:c.1104C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+527C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7875
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9175
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8632
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 9.75e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9391
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly368Gly
num of homozygotes: 8
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

15-85164531-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164531
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164531
    reference: chr 15
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1105G>A
  hgvsp: ENSP00000441855.1:p.Glu369Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1102G>A
  hgvsp: ENSP00000325123.6:p.Glu368Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1105G>A
  hgvsp: ENSP00000410198.2:p.Glu369Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+528G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+528G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+528G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1105G>A
  hgvsp: ENSP00000445451.1:p.Glu369Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.655G>A
  hgvsp: ENSP00000351257.3:p.Glu219Lys
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7902
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu369Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-85164535-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164535
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164535
    reference: chr 15
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.659G>A
  hgvsp: ENSP00000351257.3:p.Ser220Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+532G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+532G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1106G>A
  hgvsp: ENSP00000325123.6:p.Ser369Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1109G>A
  hgvsp: ENSP00000441855.1:p.Ser370Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+532G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1109G>A
  hgvsp: ENSP00000445451.1:p.Ser370Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1109G>A
  hgvsp: ENSP00000410198.2:p.Ser370Asn
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3015
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser370Asn
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS

15-85164545-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164545
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164545
    reference: chr 15
allele count: 4
allele frequency: 3.295381522795802e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1119C>T
  hgvsp: ENST00000448803.2:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.669C>T
  hgvsp: ENST00000358472.3:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1119C>T
  hgvsp: ENST00000540894.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1116C>T
  hgvsp: ENST00000327179.6:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1119C>T
  hgvsp: ENST00000546148.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+542C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+542C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+542C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr373Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/15-85164547-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164547
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164547
    reference: chr 15
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1118A>C
  hgvsp: ENSP00000325123.6:p.Asn373Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1121A>C
  hgvsp: ENSP00000410198.2:p.Asn374Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1121A>C
  hgvsp: ENSP00000441855.1:p.Asn374Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+544A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+544A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1121A>C
  hgvsp: ENSP00000445451.1:p.Asn374Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.671A>C
  hgvsp: ENSP00000351257.3:p.Asn224Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+544A>C
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27582
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asn374Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

15-85164553-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164553
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164553
    reference: chr 15
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.677A>G
  hgvsp: ENSP00000351257.3:p.Asn226Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1127A>G
  hgvsp: ENSP00000441855.1:p.Asn376Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1127A>G
  hgvsp: ENSP00000445451.1:p.Asn376Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1124A>G
  hgvsp: ENSP00000325123.6:p.Asn375Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+550A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1127A>G
  hgvsp: ENSP00000410198.2:p.Asn376Ser
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+550A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+550A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn376Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

15-85164563-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164563
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164563
    reference: chr 15
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1137A>G
  hgvsp: ENST00000546148.1:c.1137A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1137A>G
  hgvsp: ENST00000448803.2:c.1137A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+560A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.687A>G
  hgvsp: ENST00000358472.3:c.687A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+560A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1134A>G
  hgvsp: ENST00000327179.6:c.1134A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+560A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1137A>G
  hgvsp: ENST00000540894.1:c.1137A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3774
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg379Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

15-85164564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164564
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164564
    reference: chr 15
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1138C>T
  hgvsp: ENSP00000445451.1:p.His380Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+561C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1135C>T
  hgvsp: ENSP00000325123.6:p.His379Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1138C>T
  hgvsp: ENSP00000410198.2:p.His380Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+561C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1138C>T
  hgvsp: ENSP00000441855.1:p.His380Tyr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+561C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.688C>T
  hgvsp: ENSP00000351257.3:p.His230Tyr
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His380Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

15-85164575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164575
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164575
    reference: chr 15
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.699C>T
  hgvsp: ENST00000358472.3:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+572C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1146C>T
  hgvsp: ENST00000327179.6:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1149C>T
  hgvsp: ENST00000448803.2:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+572C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1149C>T
  hgvsp: ENST00000540894.1:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1149C>T
  hgvsp: ENST00000546148.1:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+572C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3759
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile383Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

15-85164587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164587
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164587
    reference: chr 15
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1158G>A
  hgvsp: ENST00000327179.6:c.1158G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+584G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.711G>A
  hgvsp: ENST00000358472.3:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1161G>A
  hgvsp: ENST00000448803.2:c.1161G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+584G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1161G>A
  hgvsp: ENST00000540894.1:c.1161G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1161G>A
  hgvsp: ENST00000546148.1:c.1161G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+584G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3760
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5013
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu387Glu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

15-85164594-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164594
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164594
    reference: chr 15
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1165T>G
  hgvsp: ENSP00000325123.6:p.Tyr389Asp
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.718T>G
  hgvsp: ENSP00000351257.3:p.Tyr240Asp
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+591T>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1168T>G
  hgvsp: ENSP00000445451.1:p.Tyr390Asp
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+591T>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1168T>G
  hgvsp: ENSP00000410198.2:p.Tyr390Asp
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1168T>G
  hgvsp: ENSP00000441855.1:p.Tyr390Asp
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+591T>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27580
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11196
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr390Asp
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

15-85164595-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164595
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164595
    reference: chr 15
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.719A>G
  hgvsp: ENSP00000351257.3:p.Tyr240Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1169A>G
  hgvsp: ENSP00000445451.1:p.Tyr390Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1169A>G
  hgvsp: ENSP00000441855.1:p.Tyr390Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1169A>G
  hgvsp: ENSP00000410198.2:p.Tyr390Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+592A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+592A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1166A>G
  hgvsp: ENSP00000325123.6:p.Tyr389Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+592A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3420
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5010
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr390Cys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

15-85164595-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164595
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164595
    reference: chr 15
allele count: 3
allele frequency: 2.471454698235381e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1169A>T
  hgvsp: ENSP00000445451.1:p.Tyr390Phe
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.719A>T
  hgvsp: ENSP00000351257.3:p.Tyr240Phe
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+592A>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+592A>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1169A>T
  hgvsp: ENSP00000441855.1:p.Tyr390Phe
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+592A>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1169A>T
  hgvsp: ENSP00000410198.2:p.Tyr390Phe
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1166A>T
  hgvsp: ENSP00000325123.6:p.Tyr389Phe
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr390Phe
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

15-85164597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164597
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164597
    reference: chr 15
allele count: 63
allele frequency: 5.190311418685121e-4
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+594A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1168A>G
  hgvsp: ENSP00000325123.6:p.Lys390Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1171A>G
  hgvsp: ENSP00000410198.2:p.Lys391Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1171A>G
  hgvsp: ENSP00000445451.1:p.Lys391Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.721A>G
  hgvsp: ENSP00000351257.3:p.Lys241Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1171A>G
  hgvsp: ENSP00000441855.1:p.Lys391Glu
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+594A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+594A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 9.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8670
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11162
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5010
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys391Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

15-85164598-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164598
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164598
    reference: chr 15
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1172A>G
  hgvsp: ENSP00000445451.1:p.Lys391Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1169A>G
  hgvsp: ENSP00000325123.6:p.Lys390Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1172A>G
  hgvsp: ENSP00000410198.2:p.Lys391Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.722A>G
  hgvsp: ENSP00000351257.3:p.Lys241Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1172A>G
  hgvsp: ENSP00000441855.1:p.Lys391Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+595A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+595A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+595A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5016
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27554
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3777
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys391Arg
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

15-85164600-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164600
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164600
    reference: chr 15
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1174T>C
  hgvsp: ENSP00000410198.2:p.Cys392Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+597T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1174T>C
  hgvsp: ENSP00000445451.1:p.Cys392Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+597T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.724T>C
  hgvsp: ENSP00000351257.3:p.Cys242Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+597T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1174T>C
  hgvsp: ENSP00000441855.1:p.Cys392Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1171T>C
  hgvsp: ENSP00000325123.6:p.Cys391Arg
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys392Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-85164602-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164602
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164602
    reference: chr 15
allele count: 13
allele frequency: 1.070963702568665e-4
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1176T>C
  hgvsp: ENST00000448803.2:c.1176T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1173T>C
  hgvsp: ENST00000327179.6:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1176T>C
  hgvsp: ENST00000540894.1:c.1176T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+599T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.726T>C
  hgvsp: ENST00000358472.3:c.726T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1176T>C
  hgvsp: ENST00000546148.1:c.1176T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+599T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+599T>C
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27552
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11256
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys392Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

15-85164605-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164605
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164605
    reference: chr 15
allele count: 4
allele frequency: 3.295381522795802e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+602C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1176C>T
  hgvsp: ENST00000327179.6:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+602C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1179C>T
  hgvsp: ENST00000546148.1:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+602C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.729C>T
  hgvsp: ENST00000358472.3:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1179C>T
  hgvsp: ENST00000540894.1:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1179C>T
  hgvsp: ENST00000448803.2:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr393Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

15-85164606-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164606
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164606
    reference: chr 15
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1180G>A
  hgvsp: ENSP00000441855.1:p.Asp394Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1180G>A
  hgvsp: ENSP00000410198.2:p.Asp394Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+603G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+603G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.730G>A
  hgvsp: ENSP00000351257.3:p.Asp244Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1180G>A
  hgvsp: ENSP00000445451.1:p.Asp394Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1177G>A
  hgvsp: ENSP00000325123.6:p.Asp393Asn
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+603G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3035
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11325
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp394Asn
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

15-85164623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164623
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164623
    reference: chr 15
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+620C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1197C>T
  hgvsp: ENST00000448803.2:c.1197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+620C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+620C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1194C>T
  hgvsp: ENST00000327179.6:c.1194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1197C>T
  hgvsp: ENST00000546148.1:c.1197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.747C>T
  hgvsp: ENST00000358472.3:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1197C>T
  hgvsp: ENST00000540894.1:c.1197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3779
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3423
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe399Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-85164624-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164624
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164624
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1195A>C
  hgvsp: ENSP00000325123.6:p.Ser399Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+621A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+621A>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1198A>C
  hgvsp: ENSP00000441855.1:p.Ser400Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1198A>C
  hgvsp: ENSP00000445451.1:p.Ser400Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1198A>C
  hgvsp: ENSP00000410198.2:p.Ser400Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.748A>C
  hgvsp: ENSP00000351257.3:p.Ser250Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+621A>C
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27545
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser400Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

15-85164634-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164634
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164634
    reference: chr 15
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1208C>G
  hgvsp: ENSP00000445451.1:p.Ser403Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+631C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1208C>G
  hgvsp: ENSP00000441855.1:p.Ser403Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+631C>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.758C>G
  hgvsp: ENSP00000351257.3:p.Ser253Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1208C>G
  hgvsp: ENSP00000410198.2:p.Ser403Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1205C>G
  hgvsp: ENSP00000325123.6:p.Ser402Ter
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+631C>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11358
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5038
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser403Ter
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

15-85164635-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164635
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164635
    reference: chr 15
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1209A>G
  hgvsp: ENST00000540894.1:c.1209A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1209A>G
  hgvsp: ENST00000546148.1:c.1209A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+632A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1206A>G
  hgvsp: ENST00000327179.6:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1209A>G
  hgvsp: ENST00000448803.2:c.1209A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.759A>G
  hgvsp: ENST00000358472.3:c.759A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+632A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+632A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9574
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27543
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11371
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser403Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

15-85164643-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164643
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164643
    reference: chr 15
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.767T>C
  hgvsp: ENSP00000351257.3:p.Ile256Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+640T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+640T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+640T>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1217T>C
  hgvsp: ENSP00000445451.1:p.Ile406Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1214T>C
  hgvsp: ENSP00000325123.6:p.Ile405Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1217T>C
  hgvsp: ENSP00000441855.1:p.Ile406Thr
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1217T>C
  hgvsp: ENSP00000410198.2:p.Ile406Thr
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile406Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

15-85164645-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164645
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164645
    reference: chr 15
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1219A>G
  hgvsp: ENSP00000445451.1:p.Thr407Ala
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+642A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1216A>G
  hgvsp: ENSP00000325123.6:p.Thr406Ala
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1219A>G
  hgvsp: ENSP00000441855.1:p.Thr407Ala
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.769A>G
  hgvsp: ENSP00000351257.3:p.Thr257Ala
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+642A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1219A>G
  hgvsp: ENSP00000410198.2:p.Thr407Ala
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+642A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27539
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr407Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

15-85164652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164652
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164652
    reference: chr 15
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1226G>A
  hgvsp: ENSP00000445451.1:p.Arg409Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1226G>A
  hgvsp: ENSP00000410198.2:p.Arg409Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.776G>A
  hgvsp: ENSP00000351257.3:p.Arg259Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+649G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1226G>A
  hgvsp: ENSP00000441855.1:p.Arg409Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+649G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1223G>A
  hgvsp: ENSP00000325123.6:p.Arg408Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+649G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg409Gln
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

15-85164666-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164666
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164666
    reference: chr 15
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1240G>A
  hgvsp: ENSP00000441855.1:p.Gly414Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+663G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1240G>A
  hgvsp: ENSP00000410198.2:p.Gly414Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+663G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.790G>A
  hgvsp: ENSP00000351257.3:p.Gly264Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1240G>A
  hgvsp: ENSP00000445451.1:p.Gly414Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1237G>A
  hgvsp: ENSP00000325123.6:p.Gly413Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+663G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly414Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

15-85164669-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164669
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164669
    reference: chr 15
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1243G>C
  hgvsp: ENSP00000441855.1:p.Glu415Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1243G>C
  hgvsp: ENSP00000445451.1:p.Glu415Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.793G>C
  hgvsp: ENSP00000351257.3:p.Glu265Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1240G>C
  hgvsp: ENSP00000325123.6:p.Glu414Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+666G>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1243G>C
  hgvsp: ENSP00000410198.2:p.Glu415Gln
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+666G>C
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+666G>C
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9580
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu415Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

15-85164671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164671
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164671
    reference: chr 15
allele count: 2
allele frequency: 1.647989452867502e-5
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.795G>A
  hgvsp: ENST00000358472.3:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1245G>A
  hgvsp: ENST00000546148.1:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1242G>A
  hgvsp: ENST00000327179.6:c.1242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1245G>A
  hgvsp: ENST00000448803.2:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1245G>A
  hgvsp: ENST00000540894.1:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+668G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+668G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+668G>A
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3423
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu415Glu
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

15-85164677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164677
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164677
    reference: chr 15
allele count: 92
allele frequency: 7.581501137225171e-4
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1251C>T
  hgvsp: ENST00000546148.1:c.1251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1251C>T
  hgvsp: ENST00000448803.2:c.1251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1251C>T
  hgvsp: ENST00000540894.1:c.1251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+674C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.801C>T
  hgvsp: ENST00000358472.3:c.801C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1248C>T
  hgvsp: ENST00000327179.6:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+674C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+674C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro417Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

15-85164682-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164682
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164682
    reference: chr 15
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.806A>G
  hgvsp: ENSP00000351257.3:p.Gln269Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1256A>G
  hgvsp: ENSP00000441855.1:p.Gln419Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+679A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1253A>G
  hgvsp: ENSP00000325123.6:p.Gln418Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+679A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1256A>G
  hgvsp: ENSP00000410198.2:p.Gln419Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1256A>G
  hgvsp: ENSP00000445451.1:p.Gln419Arg
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+679A>G
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln419Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

15-85164686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164686
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164686
    reference: chr 15
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1260C>T
  hgvsp: ENST00000448803.2:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1257C>T
  hgvsp: ENST00000327179.6:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1260C>T
  hgvsp: ENST00000540894.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.810C>T
  hgvsp: ENST00000358472.3:c.810C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+683C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+683C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1260C>T
  hgvsp: ENST00000546148.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+683C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys420Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

15-85164690-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164690
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164690
    reference: chr 15
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1264G>A
  hgvsp: ENSP00000410198.2:p.Glu422Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+687G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+687G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+687G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1264G>A
  hgvsp: ENSP00000445451.1:p.Glu422Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.814G>A
  hgvsp: ENSP00000351257.3:p.Glu272Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1264G>A
  hgvsp: ENSP00000441855.1:p.Glu422Lys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1261G>A
  hgvsp: ENSP00000325123.6:p.Glu421Lys
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27495
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu422Lys
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

15-85164692-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164692
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164692
    reference: chr 15
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+689G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.816G>A
  hgvsp: ENST00000358472.3:c.816G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1266G>A
  hgvsp: ENST00000448803.2:c.1266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+689G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+689G>A
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1266G>A
  hgvsp: ENST00000540894.1:c.1266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1266G>A
  hgvsp: ENST00000546148.1:c.1266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1263G>A
  hgvsp: ENST00000327179.6:c.1263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27495
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11309
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu422Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

15-85164701-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164701
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164701
    reference: chr 15
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+698A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1272A>G
  hgvsp: ENST00000327179.6:c.1272A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+698A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1275A>G
  hgvsp: ENST00000546148.1:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1275A>G
  hgvsp: ENST00000448803.2:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.825A>G
  hgvsp: ENST00000358472.3:c.825A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+698A>G
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1275A>G
  hgvsp: ENST00000540894.1:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7893
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27491
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys425Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

15-85164711-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 85164711
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 85164711
    reference: chr 15
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000445451
  ensembl transcript: ENST00000546148
  gene symbol: ZSCAN2
  hgvsc: ENST00000546148.1:c.1285C>T
  hgvsp: ENSP00000445451.1:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000440004
  ensembl transcript: ENST00000485222
  gene symbol: ZSCAN2
  hgvsc: ENST00000485222.2:c.577+708C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000410198
  ensembl transcript: ENST00000448803
  gene symbol: ZSCAN2
  hgvsc: ENST00000448803.2:c.1285C>T
  hgvsp: ENSP00000410198.2:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000351257
  ensembl transcript: ENST00000358472
  gene symbol: ZSCAN2
  hgvsc: ENST00000358472.3:c.835C>T
  hgvsp: ENSP00000351257.3:p.Arg279Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000325123
  ensembl transcript: ENST00000327179
  gene symbol: ZSCAN2
  hgvsc: ENST00000327179.6:c.1282C>T
  hgvsp: ENSP00000325123.6:p.Arg428Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000439132
  ensembl transcript: ENST00000538076
  gene symbol: ZSCAN2
  hgvsc: ENST00000538076.1:c.577+708C>T
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441855
  ensembl transcript: ENST00000540894
  gene symbol: ZSCAN2
  hgvsc: ENST00000540894.1:c.1285C>T
  hgvsp: ENSP00000441855.1:p.Arg429Cys
  variant of: http://identifiers.org/hgnc/20994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000176371
  ensembl protein: ENSP00000441342
  ensembl transcript: ENST00000541040
  gene symbol: ZSCAN2
  hgvsc: ENST00000541040.1:c.577+708C>T
  variant of: http://identifiers.org/hgnc/20994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg429Cys
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 3752
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3742
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.658e0

VQSLOD
type: SiteQuality
SIO_000300: -3.427e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.662e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.329e1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.311e0

DP
type: SiteQuality
SIO_000300: 2.581801e6

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27899
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.147e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.905e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 2.581874e6

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

FS
type: SiteQuality
SIO_000300: 5.615e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4904
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3753
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.474e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

QD
type: SiteQuality
SIO_000300: 1.437e1

FS
type: SiteQuality
SIO_000300: 5.693e0

DP
type: SiteQuality
SIO_000300: 2.582566e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.696e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10751
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3738
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27891
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2618
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.350000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.654e0

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

DP
type: SiteQuality
SIO_000300: 2.582906e6

QD
type: SiteQuality
SIO_000300: 1.03e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

VQSLOD
type: SiteQuality
SIO_000300: -3.021e-1

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27884
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4891
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3748
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3738
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 14
allele frequency: 1.349007515899017e-3
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.031772980839195e-4
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 2.583376e6

FS
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
SIO_000300: 1.395e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27843
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3403
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3725
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.213e0

FS
type: SiteQuality
SIO_000300: 3.291e0

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.583648e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.36e1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11221
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.81e0

VQSLOD
type: SiteQuality
SIO_000300: -1.716e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.25e1

DP
type: SiteQuality
SIO_000300: 2.583555e6

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27842
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3729
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.167e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.045e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 2.583595e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.805e0

GenotypeQuality
all individuals: 3728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27840
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11219
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3403
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.9638e1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.151e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.645e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.927e1

QD
type: SiteQuality
SIO_000300: 1.112e1

DP
type: SiteQuality
SIO_000300: 2.58407e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

GenotypeQuality
all individuals: 3729
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3758
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27839
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11252
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.525e0

DP
type: SiteQuality
SIO_000300: 2.583952e6

VQSLOD
type: SiteQuality
SIO_000300: 7.69e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

FS
type: SiteQuality
SIO_000300: 1.446e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.43e1

GenotypeQuality
all individuals: 3765
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2995
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 4.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

DP
type: SiteQuality
SIO_000300: 2.584397e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.28e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.23e-1

FS
type: SiteQuality
SIO_000300: 4.539e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 2.584378e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.815e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.261e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.373e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.584431e6

FS
type: SiteQuality
SIO_000300: 8.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.834e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.544999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

GenotypeQuality
all individuals: 4992
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2999
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 27841
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2600
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3728
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.382e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e0

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

FS
type: SiteQuality
SIO_000300: 5.52e-1

DP
type: SiteQuality
SIO_000300: 2.584628e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.024e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.837e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 2.584349e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
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SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.288e1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.493330935467435e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.247e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.271e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 1.761e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 2.584092e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.842e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.584057e6

FS
type: SiteQuality
SIO_000300: 1.468e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.065e0

VQSLOD
type: SiteQuality
SIO_000300: -2.034e0

QD
type: SiteQuality
SIO_000300: 9.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele num: 10400
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele num: 908
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South Asian
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allele count: 1
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allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.957000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
type: Population
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allele num: 10402
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South Asian
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allele num: 16512
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Latino
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allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
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East Asian
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allele frequency: 4.159926045759187e-3
allele num: 8654
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele count: 0
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European (Finnish)
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European (Non-Finnish)
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Latino
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Other
type: Population
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East Asian
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allele num: 8654
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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QD
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MQ
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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allele count: 20
allele frequency: 3.023888720895071e-3
allele num: 6614
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Other
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allele num: 908
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East Asian
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Latino
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European (Non-Finnish)
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allele count: 97
allele frequency: 1.453575496013906e-3
allele num: 66732
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MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQ
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DP
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.824e0

QD
type: SiteQuality
SIO_000300: 1.338e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: -7.188e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.824999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.579576e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.15e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495729057395475e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
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SIO_000300: -5.832e0

ClippingRankSum
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SIO_000300: -1.05e0

QD
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FS
type: SiteQuality
SIO_000300: 1.162e0

InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
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SIO_000300: 1.27e0

DP
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SIO_000300: 2.579769e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.049097775912715e-4
allele num: 66724
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

QD
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BaseQRankSum
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SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.579866e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.172e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.346e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.57877e6

FS
type: SiteQuality
SIO_000300: 1.1905e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: -1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.779e0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 2.578826e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 4.045e0

MQRankSum
type: SiteQuality
SIO_000300: -5.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

QD
type: SiteQuality
SIO_000300: 1.374e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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DP
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MQRankSum
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FS
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QD
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele num: 6614
num of homozygotes: 0

South Asian
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East Asian
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
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QD
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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East Asian
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VQSLOD
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MQ
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.989e1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.098e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.151e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 2.578116e6

FS
type: SiteQuality
SIO_000300: 5.53e-1

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3746
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3734
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

DP
type: SiteQuality
SIO_000300: 2.577983e6

FS
type: SiteQuality
SIO_000300: 1.108e0

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 1.165e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.486e0

GenotypeQuality
all individuals: 27770
bin: 9.75e1
variant carriers: 70

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 4955
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variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 34
allele frequency: 3.92881904321701e-3
allele num: 8654
num of homozygotes: 1

Latino
type: Population
allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.211680600993578e-3
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.846153846153846e-4
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498800959232614e-4
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

QD
type: SiteQuality
SIO_000300: 1.237e1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.584638e6

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27727
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variant carriers: 11

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3416
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.648582219291409e-4
allele num: 66724
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

FS
type: SiteQuality
SIO_000300: 1.102e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

QD
type: SiteQuality
SIO_000300: 1.311e1

DP
type: SiteQuality
SIO_000300: 2.577472e6

GenotypeQuality
all individuals: 27791
bin: 9.75e1
variant carriers: 330

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 61
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4956
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11101
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 17
allele frequency: 1.468555632342778e-3
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 315
allele frequency: 3.028846153846154e-2
allele num: 10400
num of homozygotes: 8

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.31e-2

DP
type: SiteQuality
SIO_000300: 2.610086e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 3760
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 11188
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27582
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 3015
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

FS
type: SiteQuality
SIO_000300: 2.47e0

DP
type: SiteQuality
SIO_000300: 2.568051e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.125e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.737e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.332e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.37e-1

DP
type: SiteQuality
SIO_000300: 2.567762e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

FS
type: SiteQuality
SIO_000300: 9.62e-1

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 27583
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4999
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994844433786943e-5
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.455e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 2.475e0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.52e-1

DP
type: SiteQuality
SIO_000300: 2.567707e6

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11182
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.869e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.03e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.567359e6

FS
type: SiteQuality
SIO_000300: 5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11177
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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European (Non-Finnish)
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allele num: 66722
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South Asian
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African
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66720
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African
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Other
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East Asian
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Latino
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South Asian
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QD
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ClippingRankSum
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DP
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 11576
num of homozygotes: 0

European (Finnish)
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African
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allele frequency: 0.0e0
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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African
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European (Non-Finnish)
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East Asian
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VQSLOD
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DP
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ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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FS
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DP
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MQ
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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European (Non-Finnish)
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East Asian
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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Other
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East Asian
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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Latino
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African
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MQRankSum
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VQSLOD
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BaseQRankSum
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FS
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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QD
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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African
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East Asian
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Other
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MQRankSum
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QD
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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FS
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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South Asian
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Other
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East Asian
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QD
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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QD
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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MQRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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African
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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African
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East Asian
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DP
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Other
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Latino
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East Asian
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European (Non-Finnish)
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FS
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MQ
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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South Asian
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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VQSLOD
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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Other
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VQSLOD
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QD
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FS
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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BaseQRankSum
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DP
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QD
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FS
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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South Asian
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European (Finnish)
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Other
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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VQSLOD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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BaseQRankSum
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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QD
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ReadPosRankSum
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VQSLOD
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FS
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DP
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MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.147e0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11298
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3765
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 2.560999e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

FS
type: SiteQuality
SIO_000300: 7.056e0

QD
type: SiteQuality
SIO_000300: 1.309e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.681e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.68e-1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.289e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.257e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

MQ
type: SiteQuality
SIO_000300: 5.767e1

DP
type: SiteQuality
SIO_000300: 2.560996e6

QD
type: SiteQuality
SIO_000300: 1.489e1

MQRankSum
type: SiteQuality
SIO_000300: -1.347e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.659e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.001e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3756
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3756
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.916e1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 2.560029e6

QD
type: SiteQuality
SIO_000300: 1.24e1